© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2790.t1 |
| Gene name | |
| Location | scaffold_012:90246..91697 |
| Strand | - |
| Gene length (bp) | 1451 |
| Transcript length (bp) | 1401 |
| Coding sequence length (bp) | 1401 |
| Protein length (aa) | 467 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.1E-30 | 46 | 179 |
| PF08031 | BBE | Berberine and berberine like | 2.3E-04 | 431 | 460 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043168 | anion binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2790.t1 MTGSNQLTALEAFLLSHPSIGYIPPTSAEYVPTANRVFIAGINARPLAIVQPQSPADVAALVKFAKTHSVPFTVR SGGHNLEARSVVNGALLIDLRALTAVTVAPDRQSATVQGGILQGELANILWEEGLVTPTGSIPSVGYVGWAMYGG YGPFSSHWGLGVDQILGATVVDADGEVVVADESLLRGIRGAGGIFGIIVDVTIKVYSLPKLLAGAIIFDSSDITQ TIITFNAAYENLLNTEGLPPPLTLQQVAFNSPQGRVFAVLFTWSHPDLEEGQRWAERISSLAPLLMSTVGPTTVP DWFTGNGALVPEAVYGSLQTHNVRRINPAVAEVIARNVASMPSDPGTMATIHQLRGQSAGEDADKLEHSVFATRE PHYMLEFVGCATDKQKAAASEEWAVKLAEEIVQADEGNVLPTAYVSLMRFASLKPEEAVKKAFGANAEAVRTLKQ RFDPENVFALALPALK* |
| Coding | >Ani_SJS100_1|g2790.t1 ATGACCGGTTCCAACCAACTTACAGCCCTGGAGGCCTTTCTCCTTTCGCATCCCAGCATCGGCTACATCCCGCCC ACCTCCGCCGAGTATGTGCCCACAGCCAACCGGGTGTTCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGTG CAGCCCCAGTCTCCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGACCCACTCTGTACCCTTTACCGTTCGC TCGGGCGGCCACAATCTCGAGGCTCGCTCCGTCGTGAATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACGGCC GTTACGGTCGCCCCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTCTCCAGGGTGAACTGGCTAATATCCTC TGGGAGGAAGGGCTGGTTACTCCGACCGGTTCTATCCCCAGCGTCGGATATGTTGGCTGGGCCATGTATGGCGGC TATGGGCCCTTTTCGTCTCATTGGGGACTGGGTGTTGATCAGATTCTGGGTGCTACGGTGGTGGATGCTGATGGG GAGGTTGTTGTTGCTGATGAGTCCCTCCTAAGGGGTATCCGTGGTGCAGGGGGAATCTTCGGCATCATTGTTGAC GTTACTATCAAGGTCTACTCCCTTCCAAAGCTCCTCGCCGGCGCAATCATTTTCGACTCCTCCGACATCACTCAA ACTATCATTACTTTCAACGCCGCCTATGAGAATCTCCTCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCAA CAAGTCGCCTTCAACAGTCCTCAGGGTCGCGTATTCGCTGTGCTCTTTACATGGAGCCACCCCGACCTAGAGGAG GGCCAACGATGGGCGGAGAGGATTTCCTCCCTCGCCCCGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCCG GACTGGTTCACAGGTAATGGTGCCCTGGTACCCGAAGCTGTGTATGGGTCCCTCCAAACTCATAACGTCCGGCGC ATCAATCCCGCCGTGGCGGAGGTGATTGCACGGAATGTGGCATCCATGCCGTCTGATCCGGGCACGATGGCCACA ATCCATCAGTTGCGGGGACAGTCTGCCGGTGAAGACGCAGACAAGCTCGAGCATTCTGTCTTTGCGACGAGGGAG CCGCATTATATGCTTGAGTTTGTGGGATGTGCTACAGATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGTT AAACTGGCAGAGGAGATTGTGCAGGCCGATGAGGGGAATGTCTTGCCCACGGCGTATGTGTCTTTGATGAGATTC GCGAGCCTGAAGCCGGAAGAGGCAGTCAAGAAGGCGTTTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCAG AGGTTTGATCCGGAGAATGTGTTTGCGTTGGCGCTGCCGGCGTTGAAGTAG |
| Transcript | >Ani_SJS100_1|g2790.t1 ATGACCGGTTCCAACCAACTTACAGCCCTGGAGGCCTTTCTCCTTTCGCATCCCAGCATCGGCTACATCCCGCCC ACCTCCGCCGAGTATGTGCCCACAGCCAACCGGGTGTTCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGTG CAGCCCCAGTCTCCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGACCCACTCTGTACCCTTTACCGTTCGC TCGGGCGGCCACAATCTCGAGGCTCGCTCCGTCGTGAATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACGGCC GTTACGGTCGCCCCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTCTCCAGGGTGAACTGGCTAATATCCTC TGGGAGGAAGGGCTGGTTACTCCGACCGGTTCTATCCCCAGCGTCGGATATGTTGGCTGGGCCATGTATGGCGGC TATGGGCCCTTTTCGTCTCATTGGGGACTGGGTGTTGATCAGATTCTGGGTGCTACGGTGGTGGATGCTGATGGG GAGGTTGTTGTTGCTGATGAGTCCCTCCTAAGGGGTATCCGTGGTGCAGGGGGAATCTTCGGCATCATTGTTGAC GTTACTATCAAGGTCTACTCCCTTCCAAAGCTCCTCGCCGGCGCAATCATTTTCGACTCCTCCGACATCACTCAA ACTATCATTACTTTCAACGCCGCCTATGAGAATCTCCTCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCAA CAAGTCGCCTTCAACAGTCCTCAGGGTCGCGTATTCGCTGTGCTCTTTACATGGAGCCACCCCGACCTAGAGGAG GGCCAACGATGGGCGGAGAGGATTTCCTCCCTCGCCCCGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCCG GACTGGTTCACAGGTAATGGTGCCCTGGTACCCGAAGCTGTGTATGGGTCCCTCCAAACTCATAACGTCCGGCGC ATCAATCCCGCCGTGGCGGAGGTGATTGCACGGAATGTGGCATCCATGCCGTCTGATCCGGGCACGATGGCCACA ATCCATCAGTTGCGGGGACAGTCTGCCGGTGAAGACGCAGACAAGCTCGAGCATTCTGTCTTTGCGACGAGGGAG CCGCATTATATGCTTGAGTTTGTGGGATGTGCTACAGATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGTT AAACTGGCAGAGGAGATTGTGCAGGCCGATGAGGGGAATGTCTTGCCCACGGCGTATGTGTCTTTGATGAGATTC GCGAGCCTGAAGCCGGAAGAGGCAGTCAAGAAGGCGTTTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCAG AGGTTTGATCCGGAGAATGTGTTTGCGTTGGCGCTGCCGGCGTTGAAGTAG |
| Gene | >Ani_SJS100_1|g2790.t1 ATGACCGGTTCCAACCAACTTACAGCCCTGGAGGCCTTTCTCCTTTCGCATCCCAGCATCGGCTACATCCCGCCC ACCTCCGCCGAGTATGTGCCCACAGCCAACCGGGTGTTCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGTG CAGCCCCAGTCTCCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGACCCACTCTGTACCCTTTACCGTTCGC TCGGGCGGCCACAATCTCGAGGCTCGCTCCGTCGTGAATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACGGCC GTTACGGTCGCCCCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTCTCCAGGGTGAACTGGCTAATATCCTC TGGGAGGAAGGGCTGGTTACTCCGACCGGTTCTATCCCCAGCGTCGGATATGTTGGCTGGGCCATGTATGGCGGC TATGGGCCCTTTTCGTCTCATTGGGGACTGGGTGTTGATCAGATTCTGGGTGCTACGGTGGTGGATGCTGATGGG GAGGTTGTTGTTGCTGATGAGTCCCTCCTAAGGGGTATCCGTGGTGCAGGGGGAATCTTCGGCATCATTGTTGAC GTTACTATCAAGGTCTACTCCCTTCCAAAGGTACGTCCACTTCCCCAATGATAGTAACAGCAAGTGTATTAAGCG TACAGCTCCTCGCCGGCGCAATCATTTTCGACTCCTCCGACATCACTCAAACTATCATTACTTTCAACGCCGCCT ATGAGAATCTCCTCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCAACAAGTCGCCTTCAACAGTCCTCAGG GTCGCGTATTCGCTGTGCTCTTTACATGGAGCCACCCCGACCTAGAGGAGGGCCAACGATGGGCGGAGAGGATTT CCTCCCTCGCCCCGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCCGGACTGGTTCACAGGTAATGGTGCCC TGGTACCCGAAGCTGTGTATGGGTCCCTCCAAACTCATAACGTCCGGCGCATCAATCCCGCCGTGGCGGAGGTGA TTGCACGGAATGTGGCATCCATGCCGTCTGATCCGGGCACGATGGCCACAATCCATCAGTTGCGGGGACAGTCTG CCGGTGAAGACGCAGACAAGCTCGAGCATTCTGTCTTTGCGACGAGGGAGCCGCATTATATGCTTGAGTTTGTGG GATGTGCTACAGATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGTTAAACTGGCAGAGGAGATTGTGCAGG CCGATGAGGGGAATGTCTTGCCCACGGCGTATGTGTCTTTGATGAGATTCGCGAGCCTGAAGCCGGAAGAGGCAG TCAAGAAGGCGTTTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCAGAGGTTTGATCCGGAGAATGTGTTTG CGTTGGCGCTGCCGGCGTTGAAGTAG |