Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2731.t1
Gene name
Locationscaffold_011:454623..455643
Strand-
Gene length (bp)1020
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.7E-43 6 195
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.4E-26 12 198
PF08659 KR KR domain 9.9E-10 8 173

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2731.t1
MSFPYKHILVIGATAGIGRALASRFVQSGAKVTVVGRRKERLDEFVQEHGADQANAVQFDISNLDKIPGFAAEIM
TKYPTIDSVFLNAGIMLPTDMTDPEKFDLSSFYKQMHINFTSQVALTHAFLPYLTKKGGDTSLIYTTSNLSIVPA
TWMPAYSASKAALNAFILCLRDQLRKSSVKIIEVSPPAVQSELHDYMGEEGRKVGMPLKEFTDEAFQGLLDGKDQ
IVVGSLGPAEVFLDIVNKRRAATTQLAKMMRGEK*
Coding >Ani_SJS100_1|g2731.t1
ATGTCCTTCCCATACAAGCACATCCTCGTCATCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTC
GTGCAATCCGGAGCCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCCTGGATGAATTCGTGCAAGAACACGGA
GCAGACCAGGCCAATGCGGTGCAATTTGATATTAGTAACTTGGATAAGATTCCTGGGTTTGCTGCCGAGATAATG
ACCAAATACCCCACAATCGACAGCGTCTTCCTGAACGCCGGCATAATGCTCCCTACTGACATGACCGATCCCGAG
AAATTCGACCTCTCCAGCTTCTACAAGCAAATGCACATCAACTTCACCAGTCAGGTTGCTCTGACGCATGCTTTC
TTGCCTTATCTTACCAAGAAAGGGGGTGATACGAGCTTGATTTACACCACATCCAACCTCTCCATAGTCCCCGCA
ACCTGGATGCCCGCTTACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGT
AAGAGCTCGGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATCCGAACTCCACGATTATATGGGCGAAGAG
GGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGATGAGGCATTCCAGGGACTACTGGACGGAAAGGACCAA
ATCGTTGTGGGAAGTCTTGGGCCTGCGGAAGTGTTCTTGGATATTGTGAATAAGCGCCGGGCTGCGACTACGCAG
TTGGCGAAGATGATGAGGGGGGAAAAATAG
Transcript >Ani_SJS100_1|g2731.t1
ATGTCCTTCCCATACAAGCACATCCTCGTCATCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTC
GTGCAATCCGGAGCCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCCTGGATGAATTCGTGCAAGAACACGGA
GCAGACCAGGCCAATGCGGTGCAATTTGATATTAGTAACTTGGATAAGATTCCTGGGTTTGCTGCCGAGATAATG
ACCAAATACCCCACAATCGACAGCGTCTTCCTGAACGCCGGCATAATGCTCCCTACTGACATGACCGATCCCGAG
AAATTCGACCTCTCCAGCTTCTACAAGCAAATGCACATCAACTTCACCAGTCAGGTTGCTCTGACGCATGCTTTC
TTGCCTTATCTTACCAAGAAAGGGGGTGATACGAGCTTGATTTACACCACATCCAACCTCTCCATAGTCCCCGCA
ACCTGGATGCCCGCTTACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGT
AAGAGCTCGGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATCCGAACTCCACGATTATATGGGCGAAGAG
GGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGATGAGGCATTCCAGGGACTACTGGACGGAAAGGACCAA
ATCGTTGTGGGAAGTCTTGGGCCTGCGGAAGTGTTCTTGGATATTGTGAATAAGCGCCGGGCTGCGACTACGCAG
TTGGCGAAGATGATGAGGGGGGAAAAATAG
Gene >Ani_SJS100_1|g2731.t1
ATGTCCTTCCCATACAAGCACATCCTCGTCATCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTC
GTGCAATCCGGAGCCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCCTGGATGAATTCGTGCAAGAACACGGA
GCAGACCAGGCCAATGCGGTGCAATTTGATATTAGTAACTTGGATAAGATTCCTGGGTTTGCTGCCGAGTAAGTT
TCGCTACCTTGATATACTATGAATTACCGCATCTAGATTGAATGGATGGCTAATTAGAATATCTTAATAGGATAA
TGACCAAATACCCCACAATCGACAGCGTCTTCCTGAACGCCGGCATAATGCTCCCTACTGACATGACCGATCCCG
AGAAATTCGACCTCTCCAGCTTCTACAAGCAAATGCACATCAACTTCACCAGTCAGGTTGCTCTGACGCATGCTT
TCTTGCCTTATCTTACCAAGAAAGGGGGTGATACGAGCTTGATTTAGTGCGTACCTCTTCATCTCTTTCAGGTTA
CACTACCAGAATGCAATAACATGTACTGACCATAAAACAGCACCACATCCAACCTCTCCATAGTCCCCGCAACCT
GGATGCCCGCTTACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGTAAGA
GCTCGGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATGTGAGTCTAAACCCCCAATTCTCTGCTTCTACT
GCCATTTCGTTCACTAGTTGTCCTAGATATATATTTCCTATCTGACTAACTATCTCTGCAGCCGAACTCCACGAT
TATATGGGCGAAGAGGGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGATGAGGCATTCCAGGGACTACTG
GACGGAAAGGACCAAATCGTTGTGGGAAGTCTTGGGCCTGCGGAAGTGTTCTTGGATATTGTGAATAAGCGCCGG
GCTGCGACTACGCAGTTGGCGAAGATGATGAGGGGGGAAAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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