Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2664.t1
Gene name
Locationscaffold_011:246142..247262
Strand+
Gene length (bp)1120
Transcript length (bp)969
Coding sequence length (bp)969
Protein length (aa) 323

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04366 Ysc84 Las17-binding protein actin regulator 2.1E-32 89 213

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2664.t1
MPVHNPFPSSLRSECDKAAQIINSFTDPDAFNSPGRTIPRKVLASAKGLAILTVAKAAFLGSVRLGSGILVARLP
DGSWSAPSAIASVGGGFGGQIGVELTDFVFILQSDHAVQTFAKLGSLTLGLNLSLAVGPVGRSGEIASVASTGGV
MGIFSFAQTRGFFGGVSAELGMIIENRLVNRKLYGDIVKAQELLSGDIPPPDEANRLMQALQADVFYAPRTNIDC
EQAPKEPPAEVTVAMPPQSPSSEVAERVAAVSPVTPSEVHEAPPSELSPAVSPSIAVIPQMPAELPGSVQELDST
PAQPKPTDQHSPVSAISTTHNT*
Coding >Ani_SJS100_1|g2664.t1
ATGCCTGTTCACAACCCGTTTCCCTCGTCTTTGCGAAGCGAATGCGACAAAGCAGCTCAGATTATCAACTCTTTC
ACAGATCCTGATGCCTTCAATAGCCCGGGGCGCACCATCCCCCGAAAAGTACTCGCCAGCGCCAAGGGCCTCGCC
ATCCTCACAGTTGCCAAAGCCGCCTTCCTAGGGTCGGTGCGCCTTGGTTCTGGTATCCTCGTTGCACGTCTACCC
GATGGATCCTGGTCCGCCCCCTCAGCTATCGCGTCCGTGGGAGGTGGCTTCGGTGGACAGATTGGTGTCGAATTA
ACGGATTTCGTGTTCATTTTGCAGAGCGATCATGCAGTGCAAACGTTTGCAAAGCTGGGAAGCTTAACCCTGGGT
CTCAATCTCTCACTGGCAGTGGGACCAGTCGGACGCAGTGGAGAAATTGCGAGCGTCGCAAGCACTGGTGGTGTC
ATGGGAATATTCTCGTTCGCGCAAACCAGGGGCTTTTTTGGAGGCGTGAGTGCAGAATTGGGCATGATAATTGAA
AACAGGCTCGTCAATCGGAAACTGTATGGGGATATTGTCAAGGCACAAGAGTTGCTGAGCGGCGACATCCCTCCG
CCTGACGAGGCCAACAGGCTTATGCAAGCGTTGCAGGCCGATGTGTTTTATGCTCCTAGGACAAACATCGATTGT
GAGCAGGCACCGAAAGAGCCACCCGCGGAAGTTACCGTTGCCATGCCACCGCAGTCACCGTCGTCCGAGGTGGCT
GAACGAGTTGCTGCGGTGTCGCCGGTGACGCCTAGCGAAGTCCACGAGGCACCGCCATCAGAGCTATCTCCCGCT
GTGTCACCGTCCATAGCAGTGATACCACAGATGCCTGCTGAGCTGCCTGGTTCAGTTCAAGAGCTGGACTCCACA
CCTGCACAACCTAAACCTACGGATCAGCACAGCCCCGTTTCTGCTATCTCCACCACTCACAATACTTGA
Transcript >Ani_SJS100_1|g2664.t1
ATGCCTGTTCACAACCCGTTTCCCTCGTCTTTGCGAAGCGAATGCGACAAAGCAGCTCAGATTATCAACTCTTTC
ACAGATCCTGATGCCTTCAATAGCCCGGGGCGCACCATCCCCCGAAAAGTACTCGCCAGCGCCAAGGGCCTCGCC
ATCCTCACAGTTGCCAAAGCCGCCTTCCTAGGGTCGGTGCGCCTTGGTTCTGGTATCCTCGTTGCACGTCTACCC
GATGGATCCTGGTCCGCCCCCTCAGCTATCGCGTCCGTGGGAGGTGGCTTCGGTGGACAGATTGGTGTCGAATTA
ACGGATTTCGTGTTCATTTTGCAGAGCGATCATGCAGTGCAAACGTTTGCAAAGCTGGGAAGCTTAACCCTGGGT
CTCAATCTCTCACTGGCAGTGGGACCAGTCGGACGCAGTGGAGAAATTGCGAGCGTCGCAAGCACTGGTGGTGTC
ATGGGAATATTCTCGTTCGCGCAAACCAGGGGCTTTTTTGGAGGCGTGAGTGCAGAATTGGGCATGATAATTGAA
AACAGGCTCGTCAATCGGAAACTGTATGGGGATATTGTCAAGGCACAAGAGTTGCTGAGCGGCGACATCCCTCCG
CCTGACGAGGCCAACAGGCTTATGCAAGCGTTGCAGGCCGATGTGTTTTATGCTCCTAGGACAAACATCGATTGT
GAGCAGGCACCGAAAGAGCCACCCGCGGAAGTTACCGTTGCCATGCCACCGCAGTCACCGTCGTCCGAGGTGGCT
GAACGAGTTGCTGCGGTGTCGCCGGTGACGCCTAGCGAAGTCCACGAGGCACCGCCATCAGAGCTATCTCCCGCT
GTGTCACCGTCCATAGCAGTGATACCACAGATGCCTGCTGAGCTGCCTGGTTCAGTTCAAGAGCTGGACTCCACA
CCTGCACAACCTAAACCTACGGATCAGCACAGCCCCGTTTCTGCTATCTCCACCACTCACAATACTTGA
Gene >Ani_SJS100_1|g2664.t1
ATGCCTGTTCACAACCCGTTTCCCTCGTCTTTGCGAAGTACGTATAGTCTTCGATGTAGACCGTCCTGGCTTTAT
GACCATCTACAATGCAGCGTTTATCGCGTAACTCAACACTAACAAAAGCTTCATCAAAAAACAGGCGAATGCGAC
AAAGCAGCTCAGATTATCAACTCTTTCACAGATCCTGATGCCTTCAATAGCCCGGGGCGCACCATCCCCCGAAAA
GTACTCGCCAGCGCCAAGGTATGCTCTGAATATATACTCGTTGCTACTATCTTGCTCACAAATAAAGGGCCTCGC
CATCCTCACAGTTGCCAAAGCCGCCTTCCTAGGGTCGGTGCGCCTTGGTTCTGGTATCCTCGTTGCACGTCTACC
CGATGGATCCTGGTCCGCCCCCTCAGCTATCGCGTCCGTGGGAGGTGGCTTCGGTGGACAGATTGGTGTCGAATT
AACGGATTTCGTGTTCATTTTGCAGAGCGATCATGCAGTGCAAACGTTTGCAAAGCTGGGAAGCTTAACCCTGGG
TCTCAATCTCTCACTGGCAGTGGGACCAGTCGGACGCAGTGGAGAAATTGCGAGCGTCGCAAGCACTGGTGGTGT
CATGGGAATATTCTCGTTCGCGCAAACCAGGGGCTTTTTTGGAGGCGTGAGTGCAGAATTGGGCATGATAATTGA
AAACAGGCTCGTCAATCGGAAACTGTATGGGGATATTGTCAAGGCACAAGAGTTGCTGAGCGGCGACATCCCTCC
GCCTGACGAGGCCAACAGGCTTATGCAAGCGTTGCAGGCCGATGTGTTTTATGCTCCTAGGACAAACATCGATTG
TGAGCAGGCACCGAAAGAGCCACCCGCGGAAGTTACCGTTGCCATGCCACCGCAGTCACCGTCGTCCGAGGTGGC
TGAACGAGTTGCTGCGGTGTCGCCGGTGACGCCTAGCGAAGTCCACGAGGCACCGCCATCAGAGCTATCTCCCGC
TGTGTCACCGTCCATAGCAGTGATACCACAGATGCCTGCTGAGCTGCCTGGTTCAGTTCAAGAGCTGGACTCCAC
ACCTGCACAACCTAAACCTACGGATCAGCACAGCCCCGTTTCTGCTATCTCCACCACTCACAATACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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