Protein ID | Ani_SJS100_1|g2658.t1 |
Gene name | |
Location | scaffold_011:223831..226209 |
Strand | - |
Gene length (bp) | 2378 |
Transcript length (bp) | 2154 |
Coding sequence length (bp) | 2154 |
Protein length (aa) | 718 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01595 | CNNM | Cyclin M transmembrane N-terminal domain | 1.8E-29 | 62 | 228 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 19 | 41 | 22 |
2 | 56 | 78 | 22 |
3 | 115 | 134 | 19 |
4 | 139 | 161 | 22 |
5 | 168 | 190 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2658.t1 MAISPATRILAARPLVLGLAKLFFLAVANLPVISAAPTFVVTSDVDPKPPSDPSLWLYLGVAAALVLSGGAFAGL TIALMGQDEVYLQVIQTSGEGSERKNAASVLKLLQRGKHWVLVTLLLSNVITNETLPIVLDRSLGGGWPAVLGST VLIVIFGEIVPQSICVRYGLPIGAWMAPCVLALMYLMSPVAYPVAKLLDKLLGEDHGTIYKKAGLKTLVTLHKTL GEAGEQLNSDEVTIISAVLDLKDKAVGSIMTPMEDVFTMSADTILDENTMDLILSQGYSRIPIHAPDNPMNFVGM LLVKMLITYDPEDCKRVRDFALATLPETRPETSCLDIVNFFQEGKSHMVLVSEYPSEDRGALGVVTLEDVIEELI GEEIIDESDVFVDVHKAIRRMAPAPKSRVPKGRIVEDPPMLPAETTLVEVDNESPAPPNGAPKDHRRLSVEAPLP RFQLRRPHSDKNSDSTDGLFTHRGATDEIRQHLKHLGPSNLASRPRQTRYQNVKIKRSASPSRSGQTDLDSSQSM SDVQPRHNSIGLQGGIGAGLVQSGMDARDGVYAVRAGYGTMNHSNPPADAGTQTKDGLPISIPEPVHEEQDDHPR SAGSRSGSARSIDSQSEHLKPGSYLHRGPARSGSITEQVVDVNGIRKVVLHTTSTSSSESERPGSRENPELPVRQ EGEIVDLGNNQSAGSKKRRRRRKRGQGPKNGGSGENTPLLSQ* |
Coding | >Ani_SJS100_1|g2658.t1 ATGGCTATATCTCCTGCCACGCGTATCCTGGCCGCCCGGCCTCTCGTCCTTGGTTTAGCGAAGCTCTTCTTCTTG GCTGTTGCCAACCTGCCCGTCATCTCCGCCGCCCCAACTTTTGTCGTCACCTCCGATGTCGACCCGAAACCCCCC AGTGACCCCAGTCTATGGCTGTACCTAGGTGTCGCCGCCGCCCTCGTTCTCAGCGGCGGTGCATTCGCCGGTCTG ACCATCGCCTTGATGGGACAGGATGAAGTCTACCTACAAGTCATCCAGACCTCCGGTGAAGGCTCCGAACGCAAA AATGCCGCAAGTGTTCTGAAGCTGTTGCAGCGAGGAAAGCACTGGGTCCTCGTCACTCTGCTGCTCAGTAATGTG ATCACCAACGAGACGCTTCCAATTGTGCTCGACCGCTCACTTGGCGGTGGCTGGCCTGCGGTGCTCGGCAGTACC GTCTTGATTGTCATTTTCGGCGAAATTGTCCCCCAATCGATATGTGTCCGTTACGGTCTCCCTATTGGTGCCTGG ATGGCTCCGTGTGTCCTAGCGCTCATGTACCTCATGTCCCCCGTCGCCTATCCGGTCGCGAAGCTGCTCGATAAG CTTTTGGGCGAAGATCACGGCACCATCTACAAGAAGGCCGGTCTGAAGACCCTGGTGACGCTGCACAAAACCTTG GGCGAAGCCGGTGAACAGCTTAACTCGGATGAAGTCACCATCATCAGCGCTGTTCTTGATCTCAAGGACAAGGCA GTCGGCAGCATCATGACCCCAATGGAAGACGTCTTCACCATGTCGGCCGACACCATTCTAGACGAAAACACGATG GACCTGATTCTGTCGCAGGGATACTCGCGTATTCCCATTCACGCTCCGGATAACCCGATGAACTTCGTCGGCATG CTCTTAGTCAAAATGCTGATCACCTATGACCCCGAAGACTGCAAGCGCGTGCGGGACTTTGCTCTGGCCACGCTT CCCGAGACCCGTCCGGAGACGAGCTGTCTGGATATTGTCAACTTCTTCCAAGAGGGCAAGTCCCACATGGTGTTG GTGTCGGAGTATCCCAGTGAAGATCGTGGCGCTTTGGGTGTGGTCACCCTGGAAGATGTGATTGAGGAGCTCATC GGAGAGGAAATTATTGACGAGTCTGATGTCTTCGTGGATGTGCACAAGGCCATCCGCCGCATGGCTCCTGCTCCC AAGTCCCGCGTTCCCAAGGGCCGGATTGTCGAGGATCCCCCCATGCTTCCGGCTGAAACCACTCTAGTCGAGGTG GACAACGAATCTCCTGCTCCGCCCAATGGGGCCCCGAAGGACCATCGCCGGCTTTCCGTAGAAGCCCCCTTGCCC CGGTTCCAGCTCCGTCGGCCCCACTCGGATAAGAATTCAGACTCGACAGACGGCTTGTTCACGCATCGCGGGGCC ACGGATGAGATCAGACAACATCTGAAGCACCTGGGTCCATCTAACCTGGCCAGCCGACCGCGCCAAACTCGGTAC CAAAATGTGAAGATCAAACGGAGTGCCTCGCCATCCCGGTCCGGACAGACTGATCTTGATTCTAGCCAGAGCATG TCCGATGTGCAACCTAGGCATAACTCGATTGGCCTGCAGGGCGGTATCGGCGCCGGACTTGTACAGAGCGGTATG GACGCCCGAGATGGGGTGTATGCGGTACGTGCGGGATATGGCACGATGAACCACTCCAATCCGCCGGCCGATGCC GGTACTCAAACGAAGGATGGTCTCCCAATTTCGATACCAGAACCGGTCCATGAAGAACAGGATGATCACCCACGG TCAGCGGGCAGTCGATCCGGCAGTGCCCGGTCCATCGACTCACAATCCGAGCATCTCAAGCCGGGCAGTTACCTC CACCGAGGCCCGGCTCGCAGTGGTAGCATCACGGAGCAGGTGGTCGATGTCAACGGCATCCGCAAGGTCGTGCTC CATACCACAAGCACTAGCTCATCTGAATCTGAACGACCGGGATCGAGAGAAAATCCGGAGTTACCTGTCCGCCAG GAGGGCGAGATCGTCGACCTGGGGAATAATCAGTCCGCCGGAAGCAAAAAACGCCGTCGTCGCAGAAAGCGCGGA CAAGGCCCGAAGAACGGGGGGTCGGGCGAAAATACCCCTCTACTGTCGCAATAA |
Transcript | >Ani_SJS100_1|g2658.t1 ATGGCTATATCTCCTGCCACGCGTATCCTGGCCGCCCGGCCTCTCGTCCTTGGTTTAGCGAAGCTCTTCTTCTTG GCTGTTGCCAACCTGCCCGTCATCTCCGCCGCCCCAACTTTTGTCGTCACCTCCGATGTCGACCCGAAACCCCCC AGTGACCCCAGTCTATGGCTGTACCTAGGTGTCGCCGCCGCCCTCGTTCTCAGCGGCGGTGCATTCGCCGGTCTG ACCATCGCCTTGATGGGACAGGATGAAGTCTACCTACAAGTCATCCAGACCTCCGGTGAAGGCTCCGAACGCAAA AATGCCGCAAGTGTTCTGAAGCTGTTGCAGCGAGGAAAGCACTGGGTCCTCGTCACTCTGCTGCTCAGTAATGTG ATCACCAACGAGACGCTTCCAATTGTGCTCGACCGCTCACTTGGCGGTGGCTGGCCTGCGGTGCTCGGCAGTACC GTCTTGATTGTCATTTTCGGCGAAATTGTCCCCCAATCGATATGTGTCCGTTACGGTCTCCCTATTGGTGCCTGG ATGGCTCCGTGTGTCCTAGCGCTCATGTACCTCATGTCCCCCGTCGCCTATCCGGTCGCGAAGCTGCTCGATAAG CTTTTGGGCGAAGATCACGGCACCATCTACAAGAAGGCCGGTCTGAAGACCCTGGTGACGCTGCACAAAACCTTG GGCGAAGCCGGTGAACAGCTTAACTCGGATGAAGTCACCATCATCAGCGCTGTTCTTGATCTCAAGGACAAGGCA GTCGGCAGCATCATGACCCCAATGGAAGACGTCTTCACCATGTCGGCCGACACCATTCTAGACGAAAACACGATG GACCTGATTCTGTCGCAGGGATACTCGCGTATTCCCATTCACGCTCCGGATAACCCGATGAACTTCGTCGGCATG CTCTTAGTCAAAATGCTGATCACCTATGACCCCGAAGACTGCAAGCGCGTGCGGGACTTTGCTCTGGCCACGCTT CCCGAGACCCGTCCGGAGACGAGCTGTCTGGATATTGTCAACTTCTTCCAAGAGGGCAAGTCCCACATGGTGTTG GTGTCGGAGTATCCCAGTGAAGATCGTGGCGCTTTGGGTGTGGTCACCCTGGAAGATGTGATTGAGGAGCTCATC GGAGAGGAAATTATTGACGAGTCTGATGTCTTCGTGGATGTGCACAAGGCCATCCGCCGCATGGCTCCTGCTCCC AAGTCCCGCGTTCCCAAGGGCCGGATTGTCGAGGATCCCCCCATGCTTCCGGCTGAAACCACTCTAGTCGAGGTG GACAACGAATCTCCTGCTCCGCCCAATGGGGCCCCGAAGGACCATCGCCGGCTTTCCGTAGAAGCCCCCTTGCCC CGGTTCCAGCTCCGTCGGCCCCACTCGGATAAGAATTCAGACTCGACAGACGGCTTGTTCACGCATCGCGGGGCC ACGGATGAGATCAGACAACATCTGAAGCACCTGGGTCCATCTAACCTGGCCAGCCGACCGCGCCAAACTCGGTAC CAAAATGTGAAGATCAAACGGAGTGCCTCGCCATCCCGGTCCGGACAGACTGATCTTGATTCTAGCCAGAGCATG TCCGATGTGCAACCTAGGCATAACTCGATTGGCCTGCAGGGCGGTATCGGCGCCGGACTTGTACAGAGCGGTATG GACGCCCGAGATGGGGTGTATGCGGTACGTGCGGGATATGGCACGATGAACCACTCCAATCCGCCGGCCGATGCC GGTACTCAAACGAAGGATGGTCTCCCAATTTCGATACCAGAACCGGTCCATGAAGAACAGGATGATCACCCACGG TCAGCGGGCAGTCGATCCGGCAGTGCCCGGTCCATCGACTCACAATCCGAGCATCTCAAGCCGGGCAGTTACCTC CACCGAGGCCCGGCTCGCAGTGGTAGCATCACGGAGCAGGTGGTCGATGTCAACGGCATCCGCAAGGTCGTGCTC CATACCACAAGCACTAGCTCATCTGAATCTGAACGACCGGGATCGAGAGAAAATCCGGAGTTACCTGTCCGCCAG GAGGGCGAGATCGTCGACCTGGGGAATAATCAGTCCGCCGGAAGCAAAAAACGCCGTCGTCGCAGAAAGCGCGGA CAAGGCCCGAAGAACGGGGGGTCGGGCGAAAATACCCCTCTACTGTCGCAATAA |
Gene | >Ani_SJS100_1|g2658.t1 ATGGCTATATCTCCTGCCACGCGTATCCTGGCCGCCCGGCCTCTCGTCCTTGGTTTAGCGAAGCTCTTCTTCTTG GCTGTTGCCAACCTGCCCGTCATCTCCGCCGCCCCAACTTTTGTCGTCACCTCCGATGTCGACCCGAAACCCCCC AGTGACCCCAGTCTATGGCTGTACCTAGGTGTCGCCGCCGCCCTCGTTCTCAGCGGCGGTGCATTCGCCGGTCTG ACCATCGCCTTGATGGGACAGGTAAACCCCCCGCCCATTCTCCCTCATAACCTTTAACCTTTCTTTTTTTTCCCA TGCTCATGTGCAATGACACTGATGTCTTCCTTTCTCCCCCTAACAGGATGAAGTCTACCTACAAGTCATCCAGAC CTCCGGTGAAGGCTCCGAACGCAAAAATGCCGCAAGTGTTCTGAAGCTGTTGCAGCGAGGAAAGCACTGGGTCCT CGTCACTCTGCTGCTCAGTAATGTGATCACCAACGAGACGCTTCCAATTGTGCTCGACCGCTCACTTGGCGGTGG CTGGCCTGCGGTGCTCGGCAGTACCGTCTTGATTGGTATGCCCAAAAATCCCTCTTCCTTGGCCTTTCGCATCCT TGCTTACCATGAATCCCTCTGTCGCGTCTAGTCATTTTCGGCGAAATTGTCCCCCAATCGATATGTGTCCGTTAC GGTCTCCCTATTGGTGCCTGGATGGCTCCGTGTGTCCTAGCGCTCATGTACCTCATGTCCCCCGTCGCCTATCCG GTCGCGAAGCTGCTCGATAAGCTTTTGGGCGAAGATCACGGCACCATCTACAAGAAGGCCGGTCTGAAGACCCTG GTGACGCTGCACAAAACCTTGGGCGAAGCCGGTGAACAGCTTAACTCGGATGAAGTCACCATCATCAGCGCTGTT CTTGATCTCAAGGACAAGGCAGTCGGCAGCATCATGACCCCAATGGAAGACGTCTTCACCATGTCGGCCGACACC ATTCTAGACGAAAACACGATGGACCTGATTCTGTCGCAGGGATACTCGCGTATTCCCATTCACGCTCCGGATAAC CCGATGAACTTCGTCGGCATGCTCTTAGTCAAAATGCTGATCACCTATGACCCCGAAGACTGCAAGCGCGTGCGG GACTTTGCTCTGGCCACGCTTCCCGAGACCCGTCCGGAGACGAGCTGTCTGGATATTGTCAACTTCTTCCAAGAG GGCAAGTCCCACATGGTGTTGGTGTCGGAGTATCCCAGTGAAGATCGTGGCGCTTTGGGTGTGGTCACCCTGGAA GATGTGATTGAGGAGCTCATCGGAGAGTACGTACTAGACAAGCTCAAAAAGGATCGGAACAATGCTGACATCGTT GTAGGGAAATTATTGACGAGTCTGATGTCTTCGTGGATGTGCACAAGGCCATCCGCCGCATGGCTCCTGCTCCCA AGTCCCGCGTTCCCAAGGGCCGGATTGTCGAGGATCCCCCCATGCTTCCGGCTGAAACCACTCTAGTCGAGGTGG ACAACGAATCTCCTGCTCCGCCCAATGGGGCCCCGAAGGACCATCGCCGGCTTTCCGTAGAAGCCCCCTTGCCCC GGTTCCAGCTCCGTCGGCCCCACTCGGATAAGAATTCAGACTCGACAGACGGCTTGTTCACGCATCGCGGGGCCA CGGATGAGATCAGACAACATCTGAAGCACCTGGGTCCATCTAACCTGGCCAGCCGACCGCGCCAAACTCGGTACC AAAATGTGAAGATCAAACGGAGTGCCTCGCCATCCCGGTCCGGACAGACTGATCTTGATTCTAGCCAGAGCATGT CCGATGTGCAACCTAGGCATAACTCGATTGGCCTGCAGGGCGGTATCGGCGCCGGACTTGTACAGAGCGGTATGG ACGCCCGAGATGGGGTGTATGCGGTACGTGCGGGATATGGCACGATGAACCACTCCAATCCGCCGGCCGATGCCG GTACTCAAACGAAGGATGGTCTCCCAATTTCGATACCAGAACCGGTCCATGAAGAACAGGATGATCACCCACGGT CAGCGGGCAGTCGATCCGGCAGTGCCCGGTCCATCGACTCACAATCCGAGCATCTCAAGCCGGGCAGTTACCTCC ACCGAGGCCCGGCTCGCAGTGGTAGCATCACGGAGCAGGTGGTCGATGTCAACGGCATCCGCAAGGTCGTGCTCC ATACCACAAGCACTAGCTCATCTGAATCTGAACGACCGGGATCGAGAGAAAATCCGGAGTTACCTGTCCGCCAGG AGGGCGAGATCGTCGACCTGGGGAATAATCAGTCCGCCGGAAGCAAAAAACGCCGTCGTCGCAGAAAGCGCGGAC AAGGCCCGAAGAACGGGGGGTCGGGCGAAAATACCCCTCTACTGTCGCAATAA |