© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2639.t1 |
| Gene name | |
| Location | scaffold_011:173445..175065 |
| Strand | + |
| Gene length (bp) | 1620 |
| Transcript length (bp) | 1293 |
| Coding sequence length (bp) | 1293 |
| Protein length (aa) | 431 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 7.7E-23 | 9 | 355 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.4E-05 | 12 | 41 |
| PF05834 | Lycopene_cycl | Lycopene cyclase protein | 2.1E-05 | 10 | 163 |
| PF00890 | FAD_binding_2 | FAD binding domain | 1.2E-04 | 10 | 41 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043168 | anion binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2639.t1 MEQAKTPLQVIVVGAGIGGMAAALTLGLRGHHVTILESAPKLMEVGAGIQVSPNMLTLFDRWGVSPLIHAQDVAL EHIHVRRWEDGSMLGTLPVNKTYGQQTVIHRADLHNALIEKALALSNVELRVNSTVTGVQFDHAAVQLANGTIVK GDIVIAADGIKSALRDHLLEEASVAIPTGDAAYRIMLPRSALENDPELKALVDEPQATRWLGPGRHVIAYPVRNH DLYNVVLLHPDSHGVEESWTTKGSKQAMVDNYKGWDRRVTKLIDLVPDDEVLEWKLCLHAPLKTWIRGSVALIGD ACHPMLPYVAQGAAQAVEDAAALGVLLSTISSRDEIPLALKAYEKSRKPRADTVQQSGSENRITLHLPDGPEQRA RDEQFRSSLKSGSNPDRWTDLETQKFLWGWDAEKAALDAWNELHGNHVSELRHHL* |
| Coding | >Ani_SJS100_1|g2639.t1 ATGGAGCAAGCAAAGACTCCTCTGCAGGTGATTGTGGTTGGTGCCGGCATTGGCGGCATGGCTGCGGCCCTGACC CTGGGTCTGCGAGGACATCATGTTACCATCCTCGAGTCCGCTCCCAAGCTCATGGAAGTTGGTGCTGGTATTCAA GTCTCACCGAATATGCTGACACTGTTTGACCGGTGGGGCGTCTCCCCGTTGATCCACGCCCAGGATGTTGCCCTC GAGCACATTCATGTAAGACGGTGGGAGGATGGCAGCATGCTTGGCACCTTGCCAGTGAACAAGACCTACGGCCAA CAGACTGTCATTCACCGCGCAGACCTCCACAACGCCCTCATCGAAAAGGCGCTGGCGCTGTCGAATGTGGAGCTG CGCGTGAACTCGACCGTCACTGGAGTTCAATTCGACCATGCCGCGGTGCAATTGGCCAACGGCACTATTGTTAAA GGAGACATCGTGATCGCGGCTGACGGCATCAAGTCTGCCCTCCGTGATCACTTGCTGGAAGAAGCATCTGTCGCC ATTCCTACGGGCGACGCAGCCTACCGGATTATGCTGCCTCGTAGTGCTCTAGAGAATGACCCTGAGCTAAAGGCA CTGGTAGATGAGCCACAAGCCACTCGGTGGCTCGGACCTGGCCGTCATGTCATCGCTTATCCAGTGCGCAACCAT GATTTGTACAATGTTGTCCTGCTTCATCCAGACAGCCATGGTGTCGAGGAGTCGTGGACGACCAAGGGTTCCAAG CAGGCCATGGTCGACAACTACAAGGGCTGGGACCGGCGTGTGACGAAGCTTATCGACCTGGTACCGGACGATGAA GTCCTGGAATGGAAGCTGTGCCTTCACGCTCCGCTGAAGACCTGGATTAGGGGTTCCGTGGCCCTCATCGGTGAC GCCTGCCACCCAATGCTGCCATATGTTGCTCAAGGTGCTGCCCAGGCCGTCGAAGACGCTGCTGCCCTCGGTGTC CTGCTCTCCACTATCTCTTCCCGGGATGAAATCCCTCTTGCACTCAAAGCGTACGAGAAGTCCCGCAAGCCTCGC GCAGACACCGTCCAGCAATCTGGGTCGGAGAACCGCATCACGCTCCACCTGCCCGATGGCCCGGAGCAACGCGCG CGTGACGAACAGTTCCGTTCTTCCCTGAAGAGCGGATCAAACCCCGACCGGTGGACAGACCTGGAAACCCAGAAG TTCCTCTGGGGCTGGGATGCTGAGAAGGCAGCTCTGGATGCATGGAATGAACTCCATGGCAACCACGTGTCCGAA CTGCGGCACCACCTGTGA |
| Transcript | >Ani_SJS100_1|g2639.t1 ATGGAGCAAGCAAAGACTCCTCTGCAGGTGATTGTGGTTGGTGCCGGCATTGGCGGCATGGCTGCGGCCCTGACC CTGGGTCTGCGAGGACATCATGTTACCATCCTCGAGTCCGCTCCCAAGCTCATGGAAGTTGGTGCTGGTATTCAA GTCTCACCGAATATGCTGACACTGTTTGACCGGTGGGGCGTCTCCCCGTTGATCCACGCCCAGGATGTTGCCCTC GAGCACATTCATGTAAGACGGTGGGAGGATGGCAGCATGCTTGGCACCTTGCCAGTGAACAAGACCTACGGCCAA CAGACTGTCATTCACCGCGCAGACCTCCACAACGCCCTCATCGAAAAGGCGCTGGCGCTGTCGAATGTGGAGCTG CGCGTGAACTCGACCGTCACTGGAGTTCAATTCGACCATGCCGCGGTGCAATTGGCCAACGGCACTATTGTTAAA GGAGACATCGTGATCGCGGCTGACGGCATCAAGTCTGCCCTCCGTGATCACTTGCTGGAAGAAGCATCTGTCGCC ATTCCTACGGGCGACGCAGCCTACCGGATTATGCTGCCTCGTAGTGCTCTAGAGAATGACCCTGAGCTAAAGGCA CTGGTAGATGAGCCACAAGCCACTCGGTGGCTCGGACCTGGCCGTCATGTCATCGCTTATCCAGTGCGCAACCAT GATTTGTACAATGTTGTCCTGCTTCATCCAGACAGCCATGGTGTCGAGGAGTCGTGGACGACCAAGGGTTCCAAG CAGGCCATGGTCGACAACTACAAGGGCTGGGACCGGCGTGTGACGAAGCTTATCGACCTGGTACCGGACGATGAA GTCCTGGAATGGAAGCTGTGCCTTCACGCTCCGCTGAAGACCTGGATTAGGGGTTCCGTGGCCCTCATCGGTGAC GCCTGCCACCCAATGCTGCCATATGTTGCTCAAGGTGCTGCCCAGGCCGTCGAAGACGCTGCTGCCCTCGGTGTC CTGCTCTCCACTATCTCTTCCCGGGATGAAATCCCTCTTGCACTCAAAGCGTACGAGAAGTCCCGCAAGCCTCGC GCAGACACCGTCCAGCAATCTGGGTCGGAGAACCGCATCACGCTCCACCTGCCCGATGGCCCGGAGCAACGCGCG CGTGACGAACAGTTCCGTTCTTCCCTGAAGAGCGGATCAAACCCCGACCGGTGGACAGACCTGGAAACCCAGAAG TTCCTCTGGGGCTGGGATGCTGAGAAGGCAGCTCTGGATGCATGGAATGAACTCCATGGCAACCACGTGTCCGAA CTGCGGCACCACCTGTGA |
| Gene | >Ani_SJS100_1|g2639.t1 ATGGAGCAAGCAAAGACTCCTCTGCAGGTGATTGTGGTTGGGTAAGATCAAACCATCCTGTCATCTGAGACTATG TATCGTTACTGACGTTACCATATAGTGCCGGTAGGACAACTGTCTCATAGACTTGATAGCGAATGAAGCATGTAA CTAATGAAATCAGGCATTGGCGGCATGGCTGCGGCCCTGACCCTGGGTCTGCGAGGACATCATGTTACCATCCTC GAGTCCGCTCCCAAGGTGCGTATACCACTCCATGCTATGATACATAGTGCTGACTGACCTCTCGTAGCTCATGGA AGTTGGTGCTGGTATTCAAGTCTCACCGAATATGCTGACACTGTTTGACCGTAAGCGCCCCTTACTTCTCCTGTT ACTCAACCCCATCTGATGATATGACTCAGGGTGGGGCGTCTCCCCGTTGATCCACGCCCAGGATGTTGCCCTCGA GCACATTCATGTAAGACGGTGGGAGGATGGCAGCATGCTTGGCACCTTGCCAGTGAACAAGACCTACGGCCAACA GACTGTCATTCACCGCGCAGACCTCCACAACGCCCTCATCGAAAAGGCGCTGGCGCTGTCGAATGTGGAGCTGCG CGTGAACTCGACCGTCACTGGAGTTCAATTCGACCATGCCGCGGTGCAATTGGCCAACGGCACTATTGTTAAAGG AGACATCGTGATCGCGGCTGACGGCATCAAGTCTGCCCTCCGTGATCACTTGCTGGAAGAAGCATCTGTCGCCAT TCCTACGGGCGACGCAGCCTACCGGATTATGCTGCCTCGTAGTGCTCTAGAGAATGACCCTGAGCTAAAGGCACT GGTAGATGAGCCACAAGCCACTCGGTGGCTCGGACCTGGCCGTCATGTCATCGCTTATCCAGTGCGCAACCATGA TTTGTACAATGTTGTCCTGCTTCATCCAGACAGCCATGGTGTCGAGGAGTCGTGGACGACCAAGGGTTCCAAGCA GGCCATGGTCGACAACTACAAGGGCTGGGACCGGCGTGTGACGAAGCTTATCGACCTGGTACCGGACGATGAAGT CCTGGAATGGAAGCTGTGCCTTCACGCTCCGCTGAAGACCTGGATTAGGGGTTCCGTGGCCCTCATCGGTGACGC CTGCCACCCAATGCTGTAAGCACCCTTCATTTTAGACATTCTGGCTAGCACTAACGTCTTCTAGGCCATATGTTG CTCAAGGTGCTGCCCAGGCCGTCGAAGACGCTGCTGCCCTCGGTGTCCTGCTCTCCACTATCTCTTCCCGGGATG AAATCCCTCTTGCACTCAAAGCGTACGAGAAGTCCCGCAAGCCTCGCGCAGACACCGTCCAGCAATCTGGGTCGG AGAACCGCATCACGCTCCACCTGCCCGATGGCCCGGAGCAACGCGCGCGTGACGAACAGTTCCGTTCTTCCCTGA AGAGCGGATCAAACCCCGACCGGTGGACAGACCTGGAAACCCAGAAGTTCCTCTGGGGCTGGGATGCTGAGAAGG CAGCTCTGGATGCATGGAATGGTAAGTTGCCATCGCCATTCACCTACCTATGGCAAGATATGCTAACAAAAACCA GAACTCCATGGCAACCACGTGTCCGAACTGCGGCACCACCTGTGA |