Protein ID | Ani_SJS100_1|g2623.t1 |
Gene name | |
Location | scaffold_011:125811..127866 |
Strand | + |
Gene length (bp) | 2055 |
Transcript length (bp) | 1791 |
Coding sequence length (bp) | 1791 |
Protein length (aa) | 597 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02752 | Arrestin_C | Arrestin (or S-antigen), C-terminal domain | 6.1E-20 | 181 | 331 |
PF00339 | Arrestin_N | Arrestin (or S-antigen), N-terminal domain | 1.4E-10 | 18 | 164 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2623.t1 MALSFFGGGGSSSHAKYFDIRLDEDYIVFRGGEEEAASAHLSGKLILCLSEPLSIKHIRLHLTGISRVCWHLPSS TAGGGRKSWRERVFYEKTWRFRDAGKSKTEVLPAGNYEYPINLVLEGSMPESVEGLNDTYVTYRFKAEIGRKYAK DIVVRRPLRIIRTLEPSALELAHAMSVENVWPNKIEYSISTPTKAVVFGTSIRVDFKLIPLLKGLRIGQIVSQLI ESHDLTLNPEDPDSVRNTYKSTRTILNDEHELDEDSGLEIIDEMAEGYQFSRHLELPKTLTRCLQDTDTRGIKIR HKLKFRVQLLNPDGHVSELRATLPVSIFISPSLAIDENNNLVDQTPHSAQRAIDDLAQQAPPLYGEHQFDQLYSE LDPSGYRTPGPGSGPGTPFGTLSRNLSAENLASMNALTNTDISASALHTRLSILRANGHDQPSPTDQEHPDNDSR RLGVPPDYFGAGSGSNSHSPASPELSRRASDEVDHDYIHSGMATPYHPQYAEVETLSRVPSYSTAVRTTVRPCDS ELPDYQAVIAEDVVISAPQSPQQAHVRTAGRGSSYFSAIDALHSRSGLLHSTSSHDDDERRLRLVQARARV* |
Coding | >Ani_SJS100_1|g2623.t1 ATGGCTTTGAGTTTCTTTGGTGGCGGAGGCAGCTCCAGTCACGCGAAATACTTCGATATCCGTCTTGATGAAGAT TATATTGTATTTCGCGGAGGCGAGGAAGAAGCGGCCAGTGCCCATTTGAGCGGAAAGCTCATTCTTTGTCTGTCG GAGCCCTTGTCCATCAAGCACATCAGACTCCACCTTACGGGTATTTCTCGGGTTTGCTGGCATTTGCCGTCTAGT ACTGCTGGAGGTGGTAGAAAGTCATGGAGAGAACGCGTGTTCTACGAAAAGACCTGGAGGTTCAGAGATGCGGGC AAGAGCAAGACGGAGGTTCTGCCAGCGGGCAACTACGAGTATCCCATCAACCTTGTTCTCGAGGGATCCATGCCG GAGAGCGTTGAAGGCCTTAACGACACCTACGTGACCTATCGCTTCAAGGCGGAAATCGGACGCAAATATGCCAAG GACATTGTTGTTCGTCGGCCGCTCCGTATCATTCGGACTCTGGAGCCTAGTGCTCTTGAGCTTGCACACGCAATG TCTGTGGAAAATGTCTGGCCAAACAAGATAGAATACTCGATCAGTACACCGACGAAGGCCGTGGTTTTCGGAACC AGCATCCGTGTGGACTTCAAGCTGATCCCTCTCCTGAAGGGACTCAGAATTGGACAGATTGTCTCTCAGCTCATT GAAAGCCACGACCTTACCCTCAACCCCGAAGACCCTGATTCCGTCCGCAACACATACAAGAGTACGAGAACCATT TTGAACGATGAGCATGAGCTGGATGAGGATAGCGGCCTGGAAATTATCGATGAAATGGCAGAGGGATACCAGTTT TCGCGTCATCTGGAACTGCCCAAGACTTTGACTCGGTGCCTGCAGGACACTGACACCAGGGGCATCAAAATTCGT CACAAGCTCAAGTTTCGCGTTCAGCTCTTGAACCCTGATGGACATGTCAGCGAGCTTCGCGCCACCCTTCCCGTC TCGATCTTTATCTCTCCTAGCCTAGCCATCGATGAGAACAACAACCTTGTCGACCAAACCCCTCATTCTGCTCAA AGAGCGATCGATGATCTCGCTCAGCAGGCTCCTCCCTTGTACGGCGAGCATCAATTCGACCAACTGTACAGCGAA CTTGATCCTTCGGGATACCGTACCCCTGGCCCTGGAAGTGGTCCTGGTACTCCGTTCGGCACCCTCAGCCGTAAT CTGTCGGCGGAGAACCTTGCTTCGATGAATGCGTTGACCAACACCGACATCTCCGCTTCTGCCTTGCACACCCGT CTATCGATCTTGCGCGCCAATGGACATGATCAACCTTCCCCTACCGACCAAGAGCATCCGGACAACGATAGCCGT CGCCTAGGCGTTCCTCCCGATTACTTCGGAGCGGGATCCGGTTCCAACTCGCACAGTCCCGCTAGCCCCGAGCTC TCTCGCCGTGCCTCCGATGAGGTCGATCACGACTACATTCACTCCGGAATGGCGACTCCCTACCATCCTCAGTAT GCCGAGGTCGAGACCCTGAGCCGTGTGCCGAGTTACTCCACCGCCGTCCGCACTACTGTCCGCCCTTGCGACTCC GAACTGCCTGATTACCAAGCCGTCATAGCCGAGGATGTTGTCATCTCAGCGCCCCAGTCGCCTCAGCAGGCTCAT GTCCGCACCGCCGGCCGCGGGTCTTCATATTTCTCCGCCATCGATGCGCTTCACAGTCGGTCTGGTCTCCTCCAC TCCACCTCCAGTCACGACGATGATGAACGTCGACTGCGTCTTGTCCAAGCTCGAGCCAGGGTCTAA |
Transcript | >Ani_SJS100_1|g2623.t1 ATGGCTTTGAGTTTCTTTGGTGGCGGAGGCAGCTCCAGTCACGCGAAATACTTCGATATCCGTCTTGATGAAGAT TATATTGTATTTCGCGGAGGCGAGGAAGAAGCGGCCAGTGCCCATTTGAGCGGAAAGCTCATTCTTTGTCTGTCG GAGCCCTTGTCCATCAAGCACATCAGACTCCACCTTACGGGTATTTCTCGGGTTTGCTGGCATTTGCCGTCTAGT ACTGCTGGAGGTGGTAGAAAGTCATGGAGAGAACGCGTGTTCTACGAAAAGACCTGGAGGTTCAGAGATGCGGGC AAGAGCAAGACGGAGGTTCTGCCAGCGGGCAACTACGAGTATCCCATCAACCTTGTTCTCGAGGGATCCATGCCG GAGAGCGTTGAAGGCCTTAACGACACCTACGTGACCTATCGCTTCAAGGCGGAAATCGGACGCAAATATGCCAAG GACATTGTTGTTCGTCGGCCGCTCCGTATCATTCGGACTCTGGAGCCTAGTGCTCTTGAGCTTGCACACGCAATG TCTGTGGAAAATGTCTGGCCAAACAAGATAGAATACTCGATCAGTACACCGACGAAGGCCGTGGTTTTCGGAACC AGCATCCGTGTGGACTTCAAGCTGATCCCTCTCCTGAAGGGACTCAGAATTGGACAGATTGTCTCTCAGCTCATT GAAAGCCACGACCTTACCCTCAACCCCGAAGACCCTGATTCCGTCCGCAACACATACAAGAGTACGAGAACCATT TTGAACGATGAGCATGAGCTGGATGAGGATAGCGGCCTGGAAATTATCGATGAAATGGCAGAGGGATACCAGTTT TCGCGTCATCTGGAACTGCCCAAGACTTTGACTCGGTGCCTGCAGGACACTGACACCAGGGGCATCAAAATTCGT CACAAGCTCAAGTTTCGCGTTCAGCTCTTGAACCCTGATGGACATGTCAGCGAGCTTCGCGCCACCCTTCCCGTC TCGATCTTTATCTCTCCTAGCCTAGCCATCGATGAGAACAACAACCTTGTCGACCAAACCCCTCATTCTGCTCAA AGAGCGATCGATGATCTCGCTCAGCAGGCTCCTCCCTTGTACGGCGAGCATCAATTCGACCAACTGTACAGCGAA CTTGATCCTTCGGGATACCGTACCCCTGGCCCTGGAAGTGGTCCTGGTACTCCGTTCGGCACCCTCAGCCGTAAT CTGTCGGCGGAGAACCTTGCTTCGATGAATGCGTTGACCAACACCGACATCTCCGCTTCTGCCTTGCACACCCGT CTATCGATCTTGCGCGCCAATGGACATGATCAACCTTCCCCTACCGACCAAGAGCATCCGGACAACGATAGCCGT CGCCTAGGCGTTCCTCCCGATTACTTCGGAGCGGGATCCGGTTCCAACTCGCACAGTCCCGCTAGCCCCGAGCTC TCTCGCCGTGCCTCCGATGAGGTCGATCACGACTACATTCACTCCGGAATGGCGACTCCCTACCATCCTCAGTAT GCCGAGGTCGAGACCCTGAGCCGTGTGCCGAGTTACTCCACCGCCGTCCGCACTACTGTCCGCCCTTGCGACTCC GAACTGCCTGATTACCAAGCCGTCATAGCCGAGGATGTTGTCATCTCAGCGCCCCAGTCGCCTCAGCAGGCTCAT GTCCGCACCGCCGGCCGCGGGTCTTCATATTTCTCCGCCATCGATGCGCTTCACAGTCGGTCTGGTCTCCTCCAC TCCACCTCCAGTCACGACGATGATGAACGTCGACTGCGTCTTGTCCAAGCTCGAGCCAGGGTCTAA |
Gene | >Ani_SJS100_1|g2623.t1 ATGGCTTTGAGTTTCTTTGGTGGCGGAGGCAGCTCCAGTCACGCGAAATACTTCGATATCCGGTGAGTCACGCCA TTCTCGCACTTACTCCGGCACGCCGGCTTCCTTACCCGAGTGCGCTGGCTAACCACCCTGTTGTCGCATAACAGT CTTGATGAAGATTATATTGTATTTCGCGGAGGCGAGGAAGAAGCGGCCAGTGCCCATTTGAGCGGAAAGCTCATT CTTTGTCTGTCGGAGCCCTTGTCCATCAAGCACATCAGACTCCACCTTACGGGTATTTCTCGGGTTTGGTAAGTG CTGTCGGCAACCCCCCGATGCGACAAGAATTGAAACTGATTGAGTTTGATCAGCTGGCATTTGCCGTCTAGTACT GCTGGAGGTGGTAGAAAGTCATGGAGAGAACGCGTGTTCTACGAAAAGACCTGGAGGTTCAGAGATGCGGGCAAG AGCAAGACGGAGGTTCTGCCAGCGGGCAACTACGAGTATCCCATCAACCTTGTTCTCGAGGGATCCATGCCGGAG AGCGTTGAAGGCCTTAACGACACCTACGTGACCTATCGCTTCAAGGCGGAAATCGGACGCAAATATGCCAAGGAC ATTGTTGTTCGTCGGCCGCTCCGTATCATTCGGACTCTGGAGCCTAGTGCTCTTGAGCTTGCACACGCAATGGTG CGCTCCCACATATATACTATACTTTTGGCGCATGTTTTACTAACAATTCTTGGTAGTCTGTGGAAAATGTCTGGC CAAACAAGATAGAATACTCGATCAGTACACCGACGAAGGCCGTGGTTTTCGGAACCAGCATCCGTGTGGACTTCA AGCTGATCCCTCTCCTGAAGGGACTCAGAATTGGACAGATTGTCTCTCAGCTCATTGAAAGCCACGACCTTACCC TCAACCCCGAAGACCCTGATTCCGTCCGCAACACATACAAGAGTACGAGAACCATTTTGAACGATGAGCATGAGC TGGATGAGGATAGCGGCCTGGAAATTATCGATGAAATGGCAGAGGGATACCAGTTTTCGCGTCATCTGGAACTGC CCAAGACTTTGACTCGGTGCCTGCAGGACACTGACACCAGGGGCATCAAAATTCGTCACAAGCTCAAGTTTCGCG TTCAGCTCTTGAACCCTGATGGACATGTCAGCGAGGTATGCAAACTCATCACTTGGTATTGGTACTGAGAAGTTT ATTCTGACCTTGTCGCAGCTTCGCGCCACCCTTCCCGTCTCGATCTTTATCTCTCCTAGCCTAGCCATCGATGAG AACAACAACCTTGTCGACCAAACCCCTCATTCTGCTCAAAGAGCGATCGATGATCTCGCTCAGCAGGCTCCTCCC TTGTACGGCGAGCATCAATTCGACCAACTGTACAGCGAACTTGATCCTTCGGGATACCGTACCCCTGGCCCTGGA AGTGGTCCTGGTACTCCGTTCGGCACCCTCAGCCGTAATCTGTCGGCGGAGAACCTTGCTTCGATGAATGCGTTG ACCAACACCGACATCTCCGCTTCTGCCTTGCACACCCGTCTATCGATCTTGCGCGCCAATGGACATGATCAACCT TCCCCTACCGACCAAGAGCATCCGGACAACGATAGCCGTCGCCTAGGCGTTCCTCCCGATTACTTCGGAGCGGGA TCCGGTTCCAACTCGCACAGTCCCGCTAGCCCCGAGCTCTCTCGCCGTGCCTCCGATGAGGTCGATCACGACTAC ATTCACTCCGGAATGGCGACTCCCTACCATCCTCAGTATGCCGAGGTCGAGACCCTGAGCCGTGTGCCGAGTTAC TCCACCGCCGTCCGCACTACTGTCCGCCCTTGCGACTCCGAACTGCCTGATTACCAAGCCGTCATAGCCGAGGAT GTTGTCATCTCAGCGCCCCAGTCGCCTCAGCAGGCTCATGTCCGCACCGCCGGCCGCGGGTCTTCATATTTCTCC GCCATCGATGCGCTTCACAGTCGGTCTGGTCTCCTCCACTCCACCTCCAGTCACGACGATGATGAACGTCGACTG CGTCTTGTCCAAGCTCGAGCCAGGGTCTAA |