Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g2620.t1
Gene name
Location	scaffold_011:107622..109075
Strand	+
Gene length (bp)	1453
Transcript length (bp)	1236
Coding sequence length (bp)	1236
Protein length (aa)	412

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04366	Ysc84	Las17-binding protein actin regulator	1.2E-40	91	215
PF00018	SH3_1	SH3 domain	1.2E-13	358	405
PF07653	SH3_2	Variant SH3 domain	1.4E-10	359	409
PF14604	SH3_9	Variant SH3 domain	1.2E-10	359	409

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g2620.t1 MPLGIHNPLPSSLGSECRKAGKILASFVDPRQAFGPDKVIPPEILAGAKGLAVLTVLKAGFLGSARFGSGVVVAR LADGTWSAPSAIATAGAGFGGQIGFELTDFVFILNDAAAVRTFSQVGTLTLGGNVSIAAGPVGRNAEAAGAASTK GVAAVFSYSKTKGLFAGVSLEGSMLVERKDANEKMYNSRVSARQLLSGTIRPPPGADPLLTVLNSRAFYGNSRNG SDMYNDIPVYDDSHDDVVWEGRRGEAYGEGTRRDRTGFSGSGSDDFRDRPRRANTWADDIYDRPAGGLSRSSTTR YSGRTDNYDSFNRSRSNTTPIDEDYVYSDRKPSRPTAPKPVFGQRTGAAPALRQDQAIALYTFDADQEGDLGFKK GDIITILKRTDKKEDWWTGRIGSRVGIFPSNYVETA*
Coding	>Ani_SJS100_1\|g2620.t1 ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCAAAATCCTCGCC TCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGT CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGA CTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACG CTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTG GTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGT AGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCC CGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTAT GTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAA GGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT GGCATTTTCCCAAGTAACTATGTCGAAACTGCTTAG
Transcript	>Ani_SJS100_1\|g2620.t1 ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCAAAATCCTCGCC TCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGT CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGA CTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACG CTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTG GTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGT AGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCC CGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTAT GTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAA GGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT GGCATTTTCCCAAGTAACTATGTCGAAACTGCTTAG
Gene	>Ani_SJS100_1\|g2620.t1 ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGTATGTTCCGCGCCGTTTTCGTTCCAATTTCC CCGCAATTCTCTTAAACAGGTGGTTCGGCTGCGACTAACAATCAGACAGGCGAATGTAGAAAGGCGGGCAAAATC CTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCC AAGGTAATTAGCAAATTCAATACTGAGCCTGTTGCTCGAAAGTCGCACCGTCGCTCACGGTTTCTTCCCTAGGGT CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGA CTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACG CTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTG GTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGT AGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCC CGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTAT GTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAA GGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT GGCATTTTCCCAAGGTAAGCAGGCCCGCGTTTCGCAGAAACCATGTCTTCCTCGGCCATGAAACTAATCATTGCT ATTCAGTAACTATGTCGAAACTGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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