Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2617.t1
Gene name
Locationscaffold_011:98939..99916
Strand+
Gene length (bp)977
Transcript length (bp)546
Coding sequence length (bp)546
Protein length (aa) 182

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 1.5E-20 24 115

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2617.t1
MRFLNIVISMMAFAVTALAITITQPQNGDQVDFSKPYTIKWTTVASDPSNFTIMLVNMNSQPTVSKKIANVKTSD
SKYTVDKVVGIPVANGYQLNAESNTTHNTGILSQSQQFNVTKVGKAETTPLPPPPKHRVTSATTSATHTAAASTS
SSAGSAAYTGTLPGSAAVIGALAMGVIAEIL*
Coding >Ani_SJS100_1|g2617.t1
ATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGCGCTGGCCATCACCATCACCCAGCCT
CAAAATGGCGACCAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGGCATCTGACCCTTCGAAC
TTCACCATCATGCTGGTCAACATGAACAGCCAGCCCACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGAT
AGCAAATACACCGTTGACAAGGTCGTCGGAATTCCGGTTGCTAATGGCTACCAACTCAACGCCGAATCCAATACC
ACCCATAACACCGGCATCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAACACCA
CTCCCTCCGCCTCCAAAACACCGGGTGACTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCC
TCATCTGCCGGATCTGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGC
GTAATTGCCGAGATTCTGTAA
Transcript >Ani_SJS100_1|g2617.t1
ATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGCGCTGGCCATCACCATCACCCAGCCT
CAAAATGGCGACCAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGGCATCTGACCCTTCGAAC
TTCACCATCATGCTGGTCAACATGAACAGCCAGCCCACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGAT
AGCAAATACACCGTTGACAAGGTCGTCGGAATTCCGGTTGCTAATGGCTACCAACTCAACGCCGAATCCAATACC
ACCCATAACACCGGCATCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAACACCA
CTCCCTCCGCCTCCAAAACACCGGGTGACTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCC
TCATCTGCCGGATCTGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGC
GTAATTGCCGAGATTCTGTAA
Gene >Ani_SJS100_1|g2617.t1
ATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGCGCTGGGTACGTGTTCCCTTGATTCT
GGATCATCTGCTCTGGACTAACATCAGCATGTCTAGCCATCACCATCACCCAGCCTCAAAATGGCGACCAGGTGG
ACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGGCGTAAGTGAACACGGGCTCATTGACGGTTACACACA
ACTAAATCATGTCTTCGGATCAGATCTGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCAGCCC
ACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAATACACCGTTGACAAGGTCGTCGGAATTCCG
GTTGCGTATGTATCTTCAAGCGGCCCAGCCGCCTTGTTATGGCATATGTCGTACGACCCTAACAAATGCGCATAG
TAATGGCTACCAACTCAACGCCGAATCCAATACCACCCATAACACCGGCATCCTGAGCCAGTCGCAGCAGTTCAA
TGTGACCAAGGTTGGCAAGGCTGAAACAAGTAAGGAAAATTCTATTTTATCATCATCATCATCATCATCATCATC
ATCATCATCATCATCATCATCACAATTATCATCATCTTCACCATCACCATCACCATGTATCCGCCCACGTACCAG
CACCACCATCACAAAAACCACTTCCCGCCCCTGCATCAACCACCAGACTACTTCACCACCATCTAGCACCACTCC
CTCCGCCTCCAAAACACCGGGTGAGTACGTACAGGATGTGAAGTAGACGGGTCTCTAACCGTGTTCTCTTTGCCT
TACCTACAGCTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCCTCATCTGCCGGATCTGCCG
CGTACACGGGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGTAATTGCCGAGATTCTGT
AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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