© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2603.t1 |
| Gene name | |
| Location | scaffold_011:50731..52758 |
| Strand | - |
| Gene length (bp) | 2027 |
| Transcript length (bp) | 1701 |
| Coding sequence length (bp) | 1701 |
| Protein length (aa) | 567 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.7E-43 | 24 | 465 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015297 | antiporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 245 | 267 | 22 |
| 4 | 337 | 354 | 17 |
| 5 | 364 | 382 | 18 |
| 6 | 403 | 422 | 19 |
| 7 | 446 | 468 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 2865 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2603.t1 MLHPILDISNFNLVLSVTGFYILLFGFVSLKVKQRWYLGEALPAFVVGICFGPAGAKLLNVSQWGGDSDNETSEI AYGLTRLVIGVQLVKVGYELPKKYLRQRMAELIICLLPLMTISWLATSACVKLVIPHISFLSALIISACVTCTDP VLSQAIAKGPFADNFVRRPLREFISAEAGGNDGFGFPLLLLGVSFLRYAEAPANTLSLEEFDLERGVPDVLGTTG VGRFGGGAGVALKHWAIEGVLYMILLGAAYGAFVGFVCQLLLKKASKHRWIDYESFTLVPVAIGLLLVGTCGCFG SDETLACFVAGCVLNWNGIYHEEIQARHDSFNSTMETLLNFAAFMFLGATMPWAYFQRPHDTGITLWRLFALGFM ILVFRRIPAILMGYRFMPKVCSDWKEALFLGHFGPIGIGAVSYVEYTRRLFPPPGQSDEEINSMTAAMVPVVYWL VLFSIVVHGISVPALNALYSLLKVPRICDHPVTVVLLSENEPLPNNSTMDPQRHSMVLNNRFSRPSESDDEQDEE NKEDTETMLRSREDSPDRSIERLSTQSERSNTRTVDMRTMV* |
| Coding | >Ani_SJS100_1|g2603.t1 ATGTTGCATCCGATTCTTGACATTAGCAATTTTAATCTAGTGCTTTCTGTTACAGGCTTTTACATCCTCCTGTTC GGCTTCGTCTCCTTAAAGGTCAAACAAAGGTGGTACCTTGGTGAAGCTCTGCCTGCCTTCGTTGTTGGAATCTGC TTTGGGCCAGCTGGTGCCAAATTGTTGAATGTTTCTCAATGGGGAGGTGACAGTGACAACGAGACTAGCGAGATA GCCTATGGCTTGACACGTCTAGTCATTGGCGTTCAGTTAGTCAAAGTGGGATATGAGCTACCCAAGAAATACCTG AGGCAGCGCATGGCGGAATTGATCATCTGCCTATTACCATTGATGACCATCTCGTGGCTGGCAACTTCTGCCTGT GTGAAGCTTGTGATCCCACACATATCCTTTCTCTCAGCACTCATTATCAGCGCTTGTGTAACCTGCACAGATCCA GTTCTATCCCAGGCAATTGCTAAGGGTCCTTTTGCCGACAACTTCGTCCGCCGACCGCTACGGGAATTCATCTCC GCCGAGGCAGGTGGGAACGACGGCTTCGGGTTTCCACTCTTGTTACTGGGGGTCTCGTTCTTGCGATATGCCGAA GCACCGGCCAATACCCTCAGCTTGGAAGAGTTTGACCTGGAACGGGGAGTTCCAGATGTACTCGGGACAACTGGA GTCGGACGTTTCGGCGGCGGCGCAGGCGTGGCACTCAAACACTGGGCTATTGAAGGAGTTCTATACATGATCCTA TTAGGCGCAGCATATGGTGCATTTGTGGGGTTCGTGTGCCAGCTGCTGCTGAAGAAAGCATCCAAACACAGGTGG ATTGATTATGAAAGCTTTACACTTGTCCCAGTGGCAATTGGGCTGCTCCTTGTTGGCACCTGCGGCTGTTTCGGC TCCGATGAGACGCTCGCTTGCTTTGTCGCTGGGTGTGTCTTGAACTGGAACGGGATTTATCACGAAGAAATTCAA GCCCGACATGATTCGTTCAACTCGACCATGGAGACCTTGCTGAATTTCGCAGCGTTCATGTTCCTGGGGGCGACC ATGCCGTGGGCATACTTCCAACGTCCCCATGATACGGGGATCACGCTCTGGCGGCTGTTTGCATTAGGTTTCATG ATCTTGGTGTTTCGGCGCATCCCAGCTATTCTTATGGGATATCGCTTCATGCCCAAAGTCTGCAGCGACTGGAAG GAGGCACTCTTTCTAGGCCACTTTGGGCCAATTGGAATCGGTGCAGTCTCGTACGTGGAGTATACCCGTCGACTC TTCCCTCCTCCCGGACAAAGTGACGAAGAGATCAACAGCATGACTGCTGCGATGGTGCCAGTCGTCTACTGGCTA GTTCTATTCTCCATCGTAGTCCACGGCATATCTGTCCCTGCTCTCAACGCACTCTACAGTCTTCTCAAAGTACCC CGTATCTGCGATCATCCAGTCACCGTCGTCCTTCTCTCAGAGAACGAGCCTCTACCCAACAACAGCACGATGGAT CCCCAACGCCACTCGATGGTCCTCAATAACCGGTTCTCGCGGCCATCAGAGAGCGACGATGAACAAGACGAGGAG AATAAAGAGGACACGGAAACCATGCTTCGGTCGAGAGAGGATAGTCCTGATCGAAGTATAGAGCGACTCTCGACG CAGTCCGAAAGGTCGAATACTCGAACCGTGGATATGAGGACTATGGTGTAA |
| Transcript | >Ani_SJS100_1|g2603.t1 ATGTTGCATCCGATTCTTGACATTAGCAATTTTAATCTAGTGCTTTCTGTTACAGGCTTTTACATCCTCCTGTTC GGCTTCGTCTCCTTAAAGGTCAAACAAAGGTGGTACCTTGGTGAAGCTCTGCCTGCCTTCGTTGTTGGAATCTGC TTTGGGCCAGCTGGTGCCAAATTGTTGAATGTTTCTCAATGGGGAGGTGACAGTGACAACGAGACTAGCGAGATA GCCTATGGCTTGACACGTCTAGTCATTGGCGTTCAGTTAGTCAAAGTGGGATATGAGCTACCCAAGAAATACCTG AGGCAGCGCATGGCGGAATTGATCATCTGCCTATTACCATTGATGACCATCTCGTGGCTGGCAACTTCTGCCTGT GTGAAGCTTGTGATCCCACACATATCCTTTCTCTCAGCACTCATTATCAGCGCTTGTGTAACCTGCACAGATCCA GTTCTATCCCAGGCAATTGCTAAGGGTCCTTTTGCCGACAACTTCGTCCGCCGACCGCTACGGGAATTCATCTCC GCCGAGGCAGGTGGGAACGACGGCTTCGGGTTTCCACTCTTGTTACTGGGGGTCTCGTTCTTGCGATATGCCGAA GCACCGGCCAATACCCTCAGCTTGGAAGAGTTTGACCTGGAACGGGGAGTTCCAGATGTACTCGGGACAACTGGA GTCGGACGTTTCGGCGGCGGCGCAGGCGTGGCACTCAAACACTGGGCTATTGAAGGAGTTCTATACATGATCCTA TTAGGCGCAGCATATGGTGCATTTGTGGGGTTCGTGTGCCAGCTGCTGCTGAAGAAAGCATCCAAACACAGGTGG ATTGATTATGAAAGCTTTACACTTGTCCCAGTGGCAATTGGGCTGCTCCTTGTTGGCACCTGCGGCTGTTTCGGC TCCGATGAGACGCTCGCTTGCTTTGTCGCTGGGTGTGTCTTGAACTGGAACGGGATTTATCACGAAGAAATTCAA GCCCGACATGATTCGTTCAACTCGACCATGGAGACCTTGCTGAATTTCGCAGCGTTCATGTTCCTGGGGGCGACC ATGCCGTGGGCATACTTCCAACGTCCCCATGATACGGGGATCACGCTCTGGCGGCTGTTTGCATTAGGTTTCATG ATCTTGGTGTTTCGGCGCATCCCAGCTATTCTTATGGGATATCGCTTCATGCCCAAAGTCTGCAGCGACTGGAAG GAGGCACTCTTTCTAGGCCACTTTGGGCCAATTGGAATCGGTGCAGTCTCGTACGTGGAGTATACCCGTCGACTC TTCCCTCCTCCCGGACAAAGTGACGAAGAGATCAACAGCATGACTGCTGCGATGGTGCCAGTCGTCTACTGGCTA GTTCTATTCTCCATCGTAGTCCACGGCATATCTGTCCCTGCTCTCAACGCACTCTACAGTCTTCTCAAAGTACCC CGTATCTGCGATCATCCAGTCACCGTCGTCCTTCTCTCAGAGAACGAGCCTCTACCCAACAACAGCACGATGGAT CCCCAACGCCACTCGATGGTCCTCAATAACCGGTTCTCGCGGCCATCAGAGAGCGACGATGAACAAGACGAGGAG AATAAAGAGGACACGGAAACCATGCTTCGGTCGAGAGAGGATAGTCCTGATCGAAGTATAGAGCGACTCTCGACG CAGTCCGAAAGGTCGAATACTCGAACCGTGGATATGAGGACTATGGTGTAA |
| Gene | >Ani_SJS100_1|g2603.t1 ATGTTGCATCCGATTCTTGACATTAGCAATTTTAATCTAGTGCTTTCTGTTACAGGTGAGCAGAAGAAGTTCTAG TAATCCTTTCTACGAAGGGAACTAATACCCCACCAAGGCTTTTACATCCTCCTGTTCGGCTTCGTCTCCTTAAAG GTCAAACAAAGGTGGTACCTTGGTGAAGCTCGTATGATTCTGTATGATCCTACATTAGACAATGTGATGCTAAAG CCTCTCAGTGCCTGCCTTCGTTGTTGGAATCTGCTTTGGGCCAGCTGGTGCCAAATTGTTGAATGTTTCTCAATG GGGAGGTGACAGTGACAACGAGACTAGCGAGATAGCCTATGTGAGACTACCGGGAAAACACCGGGAGAAATTGTG CTGACTTTTTAGGGCTTGACACGTCTAGTCATTGGCGTTCAGTTAGTCAAAGTGGGATATGAGCTACCCAAGAAA TACCTGAGGCAGCGCATGGCGGAATTGATCATCTGCCTATTACCATTGATGACCATCTCGTGGCTGGCAACTTCT GCCTGTGTGAAGCTTGTGATCCCACACATATCCTTTGTATGTCTACCCCTTTTCTCTATCTGTGCTAGCTCTGAA AGCGACTAATCACCCCACGAAAGCTCTCAGCACTCATTATCAGCGCTTGTGTAACCTGCACAGATCCAGTTCTAT CCCAGGCAATTGCTAAGGGTCCTTTTGCCGACAACTTCGTCCGCCGACCGCTACGGGAATTCATCTCCGCCGAGG CAGGTGGGAACGACGGCTTCGGGTTTCCACTCTTGTTACTGGGGGTCTCGTTCTTGCGATATGCCGAAGCACCGG CCAATACCCTCAGCTTGGAAGAGTTTGACCTGGAACGGGGAGTTCCAGATGTACTCGGGACAACTGGAGTCGGAC GTTTCGGCGGCGGCGCAGGCGTGGCACTCAAACACTGGGCTATTGAAGGAGTTCTATACATGATCCTATTAGGCG CAGCATATGGTGCATTTGTGGGGTTCGTGTGCCAGCTGCTGCTGAAGAAAGCATCCAAACACAGGTGGATTGATT ATGAAAGCTTTACACTTGTCCCAGTGGCAATTGGGCTGCTCCTTGTTGGCACCTGCGGCTGTTTCGGCTCCGATG AGACGCTCGCTTGCTTTGTCGCTGGGTGTGTCTTGAACTGGAACGGGATTTATCACGAAGAAATTCAAGCCCGAC ATGATTCGTTCAACTCGACCATGGAGACCTTGCTGAATTTCGCAGCGTTCATGTTCCTGGGGGCGACCATGCCGT GGGCATACTTCCAACGTCCCCATGATACGGGGATCACGCTCTGGCGGCTGTTTGCATTAGGTTTCATGATCTTGG TGTTTCGGCGCATCCCAGCTATTCTTATGGGATATCGCTTCATGCCCAAAGTCTGCAGCGACTGGAAGGAGGCAC TCTTTCTAGGCCACTTTGGGCCAATTGGTAAGCTTGCAGGCGCTTTTTTGAACCTCCCATGCTAAGACACATATA TAGGAATCGGTGCAGTCTCGTACGTGGAGTATACCCGTCGACTCTTCCCTCCTCCCGGACAAAGTGACGAAGAGA TCAACAGCATGACTGCTGCGATGGTGCCAGGTATGTCTGCATTGCACTCCGAATCGGCAGAATAATCTCTAACCA ACGGTGATACAGTCGTCTACTGGCTAGTTCTATTCTCCATCGTAGTCCACGGCATATCTGTCCCTGCTCTCAACG CACTCTACAGTCTTCTCAAAGTACCCCGTATCTGCGATCATCCAGTCACCGTCGTCCTTCTCTCAGAGAACGAGC CTCTACCCAACAACAGCACGATGGATCCCCAACGCCACTCGATGGTCCTCAATAACCGGTTCTCGCGGCCATCAG AGAGCGACGATGAACAAGACGAGGAGAATAAAGAGGACACGGAAACCATGCTTCGGTCGAGAGAGGATAGTCCTG ATCGAAGTATAGAGCGACTCTCGACGCAGTCCGAAAGGTCGAATACTCGAACCGTGGATATGAGGACTATGGTGT AA |