Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2599.t1
Gene name
Locationscaffold_011:37620..38627
Strand-
Gene length (bp)1007
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 6.8E-16 27 115
PF00153 Mito_carr Mitochondrial carrier protein 3.1E-14 123 217
PF00153 Mito_carr Mitochondrial carrier protein 2.6E-18 226 310

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 129 151 22
3 186 208 22
4 228 245 17
5 291 313 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2599.t1
MASPTAAKEPQPAVDFLHHPYTRAALPFVNGGLAGMTATVVIQPIDMIKVRLQLAGEGVRTGPRPSAFGVARDII
ASGKALDLYTGLSAGLLRQAVYTTARLGFFDTFSKTLNKRAEAANRSVTFAERAGAGLAAGGIAAMIGNPADLAL
VRMQSDGLKPPEARANYRSVMDALFRISKHEGVPALWAGAFPTVIRAMALNVGQLTFFAESKAQLKKHTSLSTQN
QTFAASAIAGFFASFLSLPFDFVKTRLQKQQKDPKTGRLPYKGVLDCARKVVQEEGWLRFYRGFGTYYVRIAPHA
MVTLIVADYLNLITK*
Coding >Ani_SJS100_1|g2599.t1
ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCATCACCCTTACACCCGTGCTGCT
CTTCCCTTCGTGAATGGTGGCCTGGCCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC
CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTTTGGCGTGGCCCGCGACATCATT
GCCTCAGGCAAAGCACTTGATCTGTACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACCACCGCC
CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGCCGCCAACCGCAGCGTCACCTTC
GCCGAACGTGCCGGTGCCGGTCTAGCTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG
GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCGCTCCGTCATGGACGCGCTCTTC
CGCATCTCCAAGCACGAAGGTGTCCCGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC
AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCACACTAGCCTGTCGACTCAGAAC
CAGACCTTTGCCGCGTCCGCTATCGCGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT
CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGGCGTCTTGGATTGCGCGCGCAAG
GTCGTCCAGGAGGAGGGCTGGTTGCGGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG
ATGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTACCAAGTAG
Transcript >Ani_SJS100_1|g2599.t1
ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCATCACCCTTACACCCGTGCTGCT
CTTCCCTTCGTGAATGGTGGCCTGGCCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC
CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTTTGGCGTGGCCCGCGACATCATT
GCCTCAGGCAAAGCACTTGATCTGTACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACCACCGCC
CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGCCGCCAACCGCAGCGTCACCTTC
GCCGAACGTGCCGGTGCCGGTCTAGCTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG
GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCGCTCCGTCATGGACGCGCTCTTC
CGCATCTCCAAGCACGAAGGTGTCCCGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC
AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCACACTAGCCTGTCGACTCAGAAC
CAGACCTTTGCCGCGTCCGCTATCGCGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT
CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGGCGTCTTGGATTGCGCGCGCAAG
GTCGTCCAGGAGGAGGGCTGGTTGCGGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG
ATGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTACCAAGTAG
Gene >Ani_SJS100_1|g2599.t1
ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCATCACCCTTACACCCGTGCTGCT
CTTCCCTTCGTGAATGGTGGCCTGGCCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC
CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTTTGGCGTGGCCCGCGACATCATT
GCCTCAGGCAAAGCACTTGATCTGTACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACCACCGCC
CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGCCGCCAACCGCAGCGTCACCTTC
GCCGAACGTGCCGGTGCCGGTCTAGCTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG
GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCGCTCCGTCATGGACGCGCTCTTC
CGCATCTCCAAGCACGAAGGTGTCCCGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC
AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCACACTAGCCTGTCGACTCAGAAC
CAGACCTTTGCCGCGTCCGCTATCGCGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT
CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGGCGTCTTGGATTGCGCGCGCAAG
GTCGTCCAGGAGGAGGGCTGGTTGCGGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG
TTAGTGTCCCCACCATTTTCTATCAGACTAGTGCCCTTGGCTAACCCCAGACCCACAGGATGGTGACGCTTATCG
TGGCCGATTATCTGAACTTGATTACCAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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