Protein ID | Ani_SJS100_1|g2599.t1 |
Gene name | |
Location | scaffold_011:37620..38627 |
Strand | - |
Gene length (bp) | 1007 |
Transcript length (bp) | 948 |
Coding sequence length (bp) | 948 |
Protein length (aa) | 316 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 6.8E-16 | 27 | 115 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 3.1E-14 | 123 | 217 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.6E-18 | 226 | 310 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 40 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 129 | 151 | 22 |
3 | 186 | 208 | 22 |
4 | 228 | 245 | 17 |
5 | 291 | 313 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2599.t1 MASPTAAKEPQPAVDFLHHPYTRAALPFVNGGLAGMTATVVIQPIDMIKVRLQLAGEGVRTGPRPSAFGVARDII ASGKALDLYTGLSAGLLRQAVYTTARLGFFDTFSKTLNKRAEAANRSVTFAERAGAGLAAGGIAAMIGNPADLAL VRMQSDGLKPPEARANYRSVMDALFRISKHEGVPALWAGAFPTVIRAMALNVGQLTFFAESKAQLKKHTSLSTQN QTFAASAIAGFFASFLSLPFDFVKTRLQKQQKDPKTGRLPYKGVLDCARKVVQEEGWLRFYRGFGTYYVRIAPHA MVTLIVADYLNLITK* |
Coding | >Ani_SJS100_1|g2599.t1 ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCATCACCCTTACACCCGTGCTGCT CTTCCCTTCGTGAATGGTGGCCTGGCCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTTTGGCGTGGCCCGCGACATCATT GCCTCAGGCAAAGCACTTGATCTGTACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACCACCGCC CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGCCGCCAACCGCAGCGTCACCTTC GCCGAACGTGCCGGTGCCGGTCTAGCTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCGCTCCGTCATGGACGCGCTCTTC CGCATCTCCAAGCACGAAGGTGTCCCGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCACACTAGCCTGTCGACTCAGAAC CAGACCTTTGCCGCGTCCGCTATCGCGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGGCGTCTTGGATTGCGCGCGCAAG GTCGTCCAGGAGGAGGGCTGGTTGCGGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG ATGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTACCAAGTAG |
Transcript | >Ani_SJS100_1|g2599.t1 ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCATCACCCTTACACCCGTGCTGCT CTTCCCTTCGTGAATGGTGGCCTGGCCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTTTGGCGTGGCCCGCGACATCATT GCCTCAGGCAAAGCACTTGATCTGTACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACCACCGCC CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGCCGCCAACCGCAGCGTCACCTTC GCCGAACGTGCCGGTGCCGGTCTAGCTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCGCTCCGTCATGGACGCGCTCTTC CGCATCTCCAAGCACGAAGGTGTCCCGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCACACTAGCCTGTCGACTCAGAAC CAGACCTTTGCCGCGTCCGCTATCGCGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGGCGTCTTGGATTGCGCGCGCAAG GTCGTCCAGGAGGAGGGCTGGTTGCGGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG ATGGTGACGCTTATCGTGGCCGATTATCTGAACTTGATTACCAAGTAG |
Gene | >Ani_SJS100_1|g2599.t1 ATGGCCTCCCCCACCGCGGCCAAAGAGCCCCAGCCCGCCGTCGATTTCCTCCATCACCCTTACACCCGTGCTGCT CTTCCCTTCGTGAATGGTGGCCTGGCCGGCATGACCGCCACGGTCGTGATCCAGCCCATCGACATGATCAAAGTC CGTTTGCAGCTCGCCGGTGAAGGTGTGCGCACCGGTCCCCGCCCGTCTGCCTTTGGCGTGGCCCGCGACATCATT GCCTCAGGCAAAGCACTTGATCTGTACACCGGTCTGTCGGCTGGACTGCTGCGCCAGGCCGTTTACACCACCGCC CGCCTGGGTTTCTTCGACACCTTCAGCAAGACTCTCAACAAGCGTGCCGAAGCCGCCAACCGCAGCGTCACCTTC GCCGAACGTGCCGGTGCCGGTCTAGCTGCCGGAGGTATTGCCGCCATGATTGGCAACCCGGCCGATCTGGCACTG GTGCGTATGCAGTCAGACGGTCTCAAACCTCCCGAGGCGCGGGCCAACTACCGCTCCGTCATGGACGCGCTCTTC CGCATCTCCAAGCACGAAGGTGTCCCGGCTCTGTGGGCTGGTGCTTTCCCTACCGTCATCCGTGCCATGGCGCTC AACGTCGGCCAGTTGACCTTCTTTGCCGAGTCCAAGGCGCAGCTGAAGAAGCACACTAGCCTGTCGACTCAGAAC CAGACCTTTGCCGCGTCCGCTATCGCGGGATTCTTTGCCAGTTTCCTCTCCCTGCCTTTCGACTTTGTCAAGACT CGCCTGCAGAAGCAGCAGAAGGATCCGAAGACCGGTCGGCTCCCCTACAAGGGCGTCTTGGATTGCGCGCGCAAG GTCGTCCAGGAGGAGGGCTGGTTGCGGTTCTACCGCGGTTTCGGAACGTACTATGTGCGGATCGCTCCTCATGCG TTAGTGTCCCCACCATTTTCTATCAGACTAGTGCCCTTGGCTAACCCCAGACCCACAGGATGGTGACGCTTATCG TGGCCGATTATCTGAACTTGATTACCAAGTAG |