© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2596.t1 |
| Gene name | |
| Location | scaffold_011:28856..29978 |
| Strand | + |
| Gene length (bp) | 1122 |
| Transcript length (bp) | 1008 |
| Coding sequence length (bp) | 1008 |
| Protein length (aa) | 336 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00348 | polyprenyl_synt | Polyprenyl synthetase | 3.8E-24 | 56 | 272 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008299 | isoprenoid biosynthetic process | Yes |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006720 | isoprenoid metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2596.t1 MAALPDVASIPLPLVATLGIAPLVFYLVLDRFGPLWPNSKTFLIGKKKPETVTSFECPYAYIRQIYGKHHWNPFV QKLSPRLKDEDPAKYKMVLEIMDAIHLCLMLVDDITDNSDYRKGKPAAHRIYGPSETANRAYYRVTQILNETVQR FPKLAKFLLQNLEEILEGQDLSLIWRRDGLGSLSTVPEERVAAYRKMASLKTGALFRLLGQLVMEDQSMDGTMTT LAWCSQLQNDCKNVYSSEYAKAKGALAEDLRNRELSYPIILALEAPEGHWVASALETSSPRNIRKALAVIQSERV RNACFRELKSASASVQDWLAIWGRNEKMNLKSQQT* |
| Coding | >Ani_SJS100_1|g2596.t1 ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTGCCCCTCTAGTTTTC TATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACTGGAATCCATTCGTG CAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT CACCTGTGTTTGATGCTAGTTGACGATATAACCGACAATAGCGACTACCGAAAAGGCAAGCCAGCAGCTCACCGG ATATATGGCCCTTCAGAGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGG TTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCGAGGGCCAAGACCTGTCACTGATCTGG CGACGAGATGGGCTGGGTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTG AAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACCAATCGATGGACGGGACGATGACTACT CTTGCGTGGTGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGCTAAGGCCAAGGGAGCA CTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGG GTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGATTCAGAGCGAGAGAGTG CGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAAC GAGAAGATGAATCTAAAGAGCCAGCAGACATAG |
| Transcript | >Ani_SJS100_1|g2596.t1 ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTGCCCCTCTAGTTTTC TATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACTGGAATCCATTCGTG CAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT CACCTGTGTTTGATGCTAGTTGACGATATAACCGACAATAGCGACTACCGAAAAGGCAAGCCAGCAGCTCACCGG ATATATGGCCCTTCAGAGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGG TTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCGAGGGCCAAGACCTGTCACTGATCTGG CGACGAGATGGGCTGGGTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTG AAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACCAATCGATGGACGGGACGATGACTACT CTTGCGTGGTGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGCTAAGGCCAAGGGAGCA CTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGG GTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGATTCAGAGCGAGAGAGTG CGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAAC GAGAAGATGAATCTAAAGAGCCAGCAGACATAG |
| Gene | >Ani_SJS100_1|g2596.t1 ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTGCCCCTCTAGTTTTC TATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACTGGAATCCATTCGTG CAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT CACCTGTGTTTGATGCTAGTTGACGATGTATGTATACCGTGGGCCTATATAAATACACTCTAACATCAAGCAGAT AACCGACAATAGCGACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCAAACCG CGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACA AAATCTGGAAGAGATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTTTCGAC CGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGG GCAATTGGTGATGGAGGACCAATCGATGGACGGGACGATGACTACTCTTGCGTATGGCTCGCTTGGTTTATTGCA TATCACACCAAGTCTAGCTGAAGCTGAAGCTGACCTTGAGATAGGTGGTGCTCTCAGCTGCAGAACGATTGCAAA AATGTCTACTCATCCGAATATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATAT CCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAAT ATCCGCAAGGCACTTGCCGTGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGT GCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAAGATGAATCTAAAGAGCCAGCAGACATAG |