© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2590.t1 |
| Gene name | |
| Location | scaffold_011:12575..14152 |
| Strand | - |
| Gene length (bp) | 1577 |
| Transcript length (bp) | 1518 |
| Coding sequence length (bp) | 1518 |
| Protein length (aa) | 506 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02628 | COX15-CtaA | Cytochrome oxidase assembly protein | 9.4E-117 | 109 | 466 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0016653 | oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | Yes |
| GO:0006784 | heme A biosynthetic process | Yes |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0033014 | tetrapyrrole biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0006779 | porphyrin-containing compound biosynthetic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0042168 | heme metabolic process | No |
| GO:0046148 | pigment biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0046160 | heme a metabolic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0006783 | heme biosynthetic process | No |
| GO:0033013 | tetrapyrrole metabolic process | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0005575 | cellular_component | No |
| GO:0003824 | catalytic activity | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0042440 | pigment metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0006778 | porphyrin-containing compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 109 | 131 | 22 |
| 2 | 193 | 212 | 19 |
| 3 | 219 | 241 | 22 |
| 4 | 261 | 283 | 22 |
| 5 | 319 | 341 | 22 |
| 6 | 390 | 412 | 22 |
| 7 | 425 | 447 | 22 |
| 8 | 452 | 474 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2590.t1 MASLGPSVPLLRSLSPRLSRELFTCRQCLVRTQNHATKSAFRRQFSALPFTQNANSRANSALQSRTRKLFASSLK RSASGSATAEAIAAQGEAAKAKSSFPDVSDKKVAYWLLASAASVFGIVVFGGLTRLTESGLSITEWRPVTGSLPP MNAEDWESEFSKYRASPEFQLLNPHMTLSEFKSIYYMEWIHRLWGRFVGLSFVLPAAYFVAAKKVSKPMALRLAG IAGLIGFQGFIGWWMVKSGLKDDLFAPGSHPRVSQYRLTAHLGAAFVCYTAMLWNGLAILRSHRLLADPEAGIKL LDALRDPKLKIFRRSVAALAALVFVTAMSGALVAGLDAGLIYNEFPFMGNGLAPPKSELFDERYSRHEDRSDLWW RNMLENPSLVQLDHRALAITTFTSIMALLAYTRGSPTMKRLLPPAAKKGVHGVVAFACMQVGLGISTLLYLVPTP LASAHQAGSLFLLTWVLVLGSRIWHPSRTAKLLQMAAKARGQALANAAAHAPRRV* |
| Coding | >Ani_SJS100_1|g2590.t1 ATGGCATCCTTGGGGCCTTCCGTGCCCTTGCTGCGAAGCTTGTCTCCCCGGCTATCGAGGGAGCTCTTCACCTGC CGCCAATGTTTGGTCCGCACTCAAAATCACGCGACTAAATCCGCCTTCCGCAGACAATTCTCCGCCCTGCCCTTC ACCCAGAACGCCAACAGCAGAGCCAACTCTGCCCTGCAGTCGAGGACCAGAAAGCTTTTTGCGTCTAGCCTGAAA AGAAGTGCTTCCGGATCAGCAACAGCGGAGGCAATTGCTGCCCAGGGAGAAGCCGCGAAAGCCAAATCTAGCTTC CCGGATGTGAGCGATAAGAAAGTGGCCTACTGGCTACTGGCCAGCGCGGCCAGCGTGTTTGGCATTGTAGTTTTT GGCGGCCTTACCAGGTTGACTGAATCAGGTCTGAGTATCACCGAATGGCGCCCTGTCACCGGATCCCTTCCCCCC ATGAACGCCGAAGACTGGGAGTCAGAATTCTCCAAGTACCGTGCCTCCCCCGAATTTCAGCTTTTGAACCCGCAT ATGACCCTCTCCGAATTCAAGTCGATTTACTACATGGAATGGATCCACCGTCTCTGGGGCCGCTTTGTCGGCTTG TCGTTCGTCCTCCCGGCCGCATATTTCGTTGCTGCGAAAAAGGTTAGCAAGCCTATGGCTCTGCGTCTCGCTGGT ATCGCAGGCTTGATCGGATTTCAAGGTTTTATCGGCTGGTGGATGGTCAAGTCTGGCCTGAAGGATGATCTTTTC GCTCCCGGCAGCCACCCTCGTGTCAGCCAGTACCGTCTGACAGCGCATCTGGGTGCGGCTTTCGTCTGCTATACT GCTATGCTCTGGAACGGACTTGCTATCCTGCGCTCCCACCGATTGCTCGCCGACCCGGAAGCTGGAATCAAGCTT CTTGACGCGCTCCGTGATCCTAAGCTCAAGATCTTCCGTCGCTCCGTCGCCGCTTTGGCTGCATTGGTTTTCGTG ACTGCCATGTCGGGTGCCCTGGTCGCTGGCCTGGATGCTGGTCTCATCTATAACGAGTTCCCATTTATGGGTAAT GGCCTGGCTCCTCCTAAGTCTGAATTGTTTGATGAACGGTACTCTCGCCACGAGGACAGATCAGACCTGTGGTGG AGAAACATGCTGGAGAATCCTTCCCTGGTGCAACTGGACCACCGCGCTCTGGCCATAACTACCTTCACGAGCATC ATGGCTCTGTTGGCCTACACTCGCGGATCCCCCACCATGAAACGCCTTTTGCCCCCCGCTGCGAAGAAGGGTGTC CACGGTGTGGTCGCTTTCGCTTGCATGCAGGTTGGTCTGGGTATCTCGACGCTTCTTTACCTTGTTCCCACGCCT TTGGCCTCTGCCCACCAGGCGGGCAGTCTTTTCCTTCTTACCTGGGTGCTTGTCCTGGGAAGTCGTATCTGGCAC CCGTCTAGGACGGCTAAGCTGCTTCAGATGGCAGCCAAGGCCCGTGGACAGGCTCTCGCCAACGCCGCGGCCCAT GCGCCCCGGAGGGTATAA |
| Transcript | >Ani_SJS100_1|g2590.t1 ATGGCATCCTTGGGGCCTTCCGTGCCCTTGCTGCGAAGCTTGTCTCCCCGGCTATCGAGGGAGCTCTTCACCTGC CGCCAATGTTTGGTCCGCACTCAAAATCACGCGACTAAATCCGCCTTCCGCAGACAATTCTCCGCCCTGCCCTTC ACCCAGAACGCCAACAGCAGAGCCAACTCTGCCCTGCAGTCGAGGACCAGAAAGCTTTTTGCGTCTAGCCTGAAA AGAAGTGCTTCCGGATCAGCAACAGCGGAGGCAATTGCTGCCCAGGGAGAAGCCGCGAAAGCCAAATCTAGCTTC CCGGATGTGAGCGATAAGAAAGTGGCCTACTGGCTACTGGCCAGCGCGGCCAGCGTGTTTGGCATTGTAGTTTTT GGCGGCCTTACCAGGTTGACTGAATCAGGTCTGAGTATCACCGAATGGCGCCCTGTCACCGGATCCCTTCCCCCC ATGAACGCCGAAGACTGGGAGTCAGAATTCTCCAAGTACCGTGCCTCCCCCGAATTTCAGCTTTTGAACCCGCAT ATGACCCTCTCCGAATTCAAGTCGATTTACTACATGGAATGGATCCACCGTCTCTGGGGCCGCTTTGTCGGCTTG TCGTTCGTCCTCCCGGCCGCATATTTCGTTGCTGCGAAAAAGGTTAGCAAGCCTATGGCTCTGCGTCTCGCTGGT ATCGCAGGCTTGATCGGATTTCAAGGTTTTATCGGCTGGTGGATGGTCAAGTCTGGCCTGAAGGATGATCTTTTC GCTCCCGGCAGCCACCCTCGTGTCAGCCAGTACCGTCTGACAGCGCATCTGGGTGCGGCTTTCGTCTGCTATACT GCTATGCTCTGGAACGGACTTGCTATCCTGCGCTCCCACCGATTGCTCGCCGACCCGGAAGCTGGAATCAAGCTT CTTGACGCGCTCCGTGATCCTAAGCTCAAGATCTTCCGTCGCTCCGTCGCCGCTTTGGCTGCATTGGTTTTCGTG ACTGCCATGTCGGGTGCCCTGGTCGCTGGCCTGGATGCTGGTCTCATCTATAACGAGTTCCCATTTATGGGTAAT GGCCTGGCTCCTCCTAAGTCTGAATTGTTTGATGAACGGTACTCTCGCCACGAGGACAGATCAGACCTGTGGTGG AGAAACATGCTGGAGAATCCTTCCCTGGTGCAACTGGACCACCGCGCTCTGGCCATAACTACCTTCACGAGCATC ATGGCTCTGTTGGCCTACACTCGCGGATCCCCCACCATGAAACGCCTTTTGCCCCCCGCTGCGAAGAAGGGTGTC CACGGTGTGGTCGCTTTCGCTTGCATGCAGGTTGGTCTGGGTATCTCGACGCTTCTTTACCTTGTTCCCACGCCT TTGGCCTCTGCCCACCAGGCGGGCAGTCTTTTCCTTCTTACCTGGGTGCTTGTCCTGGGAAGTCGTATCTGGCAC CCGTCTAGGACGGCTAAGCTGCTTCAGATGGCAGCCAAGGCCCGTGGACAGGCTCTCGCCAACGCCGCGGCCCAT GCGCCCCGGAGGGTATAA |
| Gene | >Ani_SJS100_1|g2590.t1 ATGGCATCCTTGGGGCCTTCCGTGCCCTTGCTGCGAAGCTTGTCTCCCCGGCTATCGAGGGAGCTCTTCACCTGC CGCCAATGTTTGGTCCGCACTCAAAATCACGCGACTAAATCCGCCTTCCGCAGACAATTCTCCGCCCTGCCCTTC ACCCAGAACGCCAACAGCAGAGCCAACTCTGCCCTGCAGTCGAGGACCAGAAAGCTTTTTGCGTCTAGCCTGAAA AGAAGTGCTTCCGGATCAGCAACAGCGGAGGCAATTGCTGCCCAGGGAGAAGCCGCGAAAGCCAAATCTAGCTTC CCGGATGTGAGCGATAAGAAAGTGGCCTACTGGCTACTGGCCAGCGCGGCCAGCGTGTTTGGCATTGTAGTTTTT GGCGGCCTTACCAGGTTGACTGAATCAGGGTATGGTCCTTCCATCCATTGCTATATTTCGGACCAATGCTAACGC AGCCATTTTATAGTCTGAGTATCACCGAATGGCGCCCTGTCACCGGATCCCTTCCCCCCATGAACGCCGAAGACT GGGAGTCAGAATTCTCCAAGTACCGTGCCTCCCCCGAATTTCAGCTTTTGAACCCGCATATGACCCTCTCCGAAT TCAAGTCGATTTACTACATGGAATGGATCCACCGTCTCTGGGGCCGCTTTGTCGGCTTGTCGTTCGTCCTCCCGG CCGCATATTTCGTTGCTGCGAAAAAGGTTAGCAAGCCTATGGCTCTGCGTCTCGCTGGTATCGCAGGCTTGATCG GATTTCAAGGTTTTATCGGCTGGTGGATGGTCAAGTCTGGCCTGAAGGATGATCTTTTCGCTCCCGGCAGCCACC CTCGTGTCAGCCAGTACCGTCTGACAGCGCATCTGGGTGCGGCTTTCGTCTGCTATACTGCTATGCTCTGGAACG GACTTGCTATCCTGCGCTCCCACCGATTGCTCGCCGACCCGGAAGCTGGAATCAAGCTTCTTGACGCGCTCCGTG ATCCTAAGCTCAAGATCTTCCGTCGCTCCGTCGCCGCTTTGGCTGCATTGGTTTTCGTGACTGCCATGTCGGGTG CCCTGGTCGCTGGCCTGGATGCTGGTCTCATCTATAACGAGTTCCCATTTATGGGTAATGGCCTGGCTCCTCCTA AGTCTGAATTGTTTGATGAACGGTACTCTCGCCACGAGGACAGATCAGACCTGTGGTGGAGAAACATGCTGGAGA ATCCTTCCCTGGTGCAACTGGACCACCGCGCTCTGGCCATAACTACCTTCACGAGCATCATGGCTCTGTTGGCCT ACACTCGCGGATCCCCCACCATGAAACGCCTTTTGCCCCCCGCTGCGAAGAAGGGTGTCCACGGTGTGGTCGCTT TCGCTTGCATGCAGGTTGGTCTGGGTATCTCGACGCTTCTTTACCTTGTTCCCACGCCTTTGGCCTCTGCCCACC AGGCGGGCAGTCTTTTCCTTCTTACCTGGGTGCTTGTCCTGGGAAGTCGTATCTGGCACCCGTCTAGGACGGCTA AGCTGCTTCAGATGGCAGCCAAGGCCCGTGGACAGGCTCTCGCCAACGCCGCGGCCCATGCGCCCCGGAGGGTAT AA |