Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2574.t1
Gene name
Locationscaffold_010:548238..549105
Strand-
Gene length (bp)867
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 5.9E-32 33 151

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2574.t1
MKFTAALFTLLATSVMANPTKVAREPTLVERDAASITSVLSDINTQVQALDSAINSYSGGDPSKVESASSSLVSE
INSGVSTVNGGSELSATDALTITGPVQDLTKEVQTTIDDLISKKSDFVSAGAGATVYSQLQKQYTASKNLADAIT
SKVPSSLSSIASSLSSGITDAIQKGVDAYKDVATSSASSSSEASSATSAASTADATTDATTAATTAASTTESSAA
STSSSPVIPSSPNSSASASATPSSSASASASASPSLYTGAANVERFSYTLGGAAVAAAIAIAV*
Coding >Ani_SJS100_1|g2574.t1
ATGAAGTTCACCGCTGCCTTGTTCACTCTGTTGGCCACCAGTGTCATGGCCAACCCCACCAAGGTTGCTCGCGAG
CCTACCCTCGTCGAGCGTGACGCTGCCTCCATCACGAGCGTCCTCTCCGACATTAACACCCAGGTGCAGGCTCTT
GATTCGGCCATCAACTCTTACTCTGGAGGCGACCCCTCCAAGGTTGAGTCCGCCTCTTCCTCTTTGGTCTCGGAG
ATCAACTCTGGTGTCTCCACTGTCAACGGAGGCTCTGAGCTCAGCGCCACCGATGCTCTCACTATCACTGGCCCC
GTTCAGGACCTCACCAAGGAGGTGCAGACCACCATTGATGATCTGATTTCGAAGAAATCCGACTTCGTGTCTGCC
GGCGCCGGTGCCACTGTCTACTCCCAGCTGCAGAAGCAGTATACTGCTTCCAAGAACCTGGCCGATGCCATCACC
TCCAAGGTCCCGTCCTCTCTGTCTAGCATCGCCAGCTCCTTGTCTTCCGGTATCACCGACGCCATTCAGAAGGGT
GTCGATGCCTACAAGGACGTGGCTACCTCTTCCGCTAGCTCCTCCTCTGAGGCCTCCAGTGCTACCTCCGCTGCC
TCTACTGCCGATGCCACTACCGATGCCACTACTGCTGCCACCACTGCTGCCTCCACCACTGAGAGCTCTGCTGCT
TCCACCAGCTCCAGCCCCGTCATCCCCAGCTCTCCCAACAGCTCTGCTTCTGCTTCCGCCACTCCCAGCAGCTCT
GCCTCCGCTTCTGCCTCTGCCTCTCCCTCCCTTTACACCGGTGCTGCCAACGTGGAGCGCTTCAGCTACACCCTG
GGTGGTGCTGCTGTTGCTGCTGCCATTGCCATCGCTGTCTAA
Transcript >Ani_SJS100_1|g2574.t1
ATGAAGTTCACCGCTGCCTTGTTCACTCTGTTGGCCACCAGTGTCATGGCCAACCCCACCAAGGTTGCTCGCGAG
CCTACCCTCGTCGAGCGTGACGCTGCCTCCATCACGAGCGTCCTCTCCGACATTAACACCCAGGTGCAGGCTCTT
GATTCGGCCATCAACTCTTACTCTGGAGGCGACCCCTCCAAGGTTGAGTCCGCCTCTTCCTCTTTGGTCTCGGAG
ATCAACTCTGGTGTCTCCACTGTCAACGGAGGCTCTGAGCTCAGCGCCACCGATGCTCTCACTATCACTGGCCCC
GTTCAGGACCTCACCAAGGAGGTGCAGACCACCATTGATGATCTGATTTCGAAGAAATCCGACTTCGTGTCTGCC
GGCGCCGGTGCCACTGTCTACTCCCAGCTGCAGAAGCAGTATACTGCTTCCAAGAACCTGGCCGATGCCATCACC
TCCAAGGTCCCGTCCTCTCTGTCTAGCATCGCCAGCTCCTTGTCTTCCGGTATCACCGACGCCATTCAGAAGGGT
GTCGATGCCTACAAGGACGTGGCTACCTCTTCCGCTAGCTCCTCCTCTGAGGCCTCCAGTGCTACCTCCGCTGCC
TCTACTGCCGATGCCACTACCGATGCCACTACTGCTGCCACCACTGCTGCCTCCACCACTGAGAGCTCTGCTGCT
TCCACCAGCTCCAGCCCCGTCATCCCCAGCTCTCCCAACAGCTCTGCTTCTGCTTCCGCCACTCCCAGCAGCTCT
GCCTCCGCTTCTGCCTCTGCCTCTCCCTCCCTTTACACCGGTGCTGCCAACGTGGAGCGCTTCAGCTACACCCTG
GGTGGTGCTGCTGTTGCTGCTGCCATTGCCATCGCTGTCTAA
Gene >Ani_SJS100_1|g2574.t1
ATGAAGTTCACCGCTGCCTTGTTCACTCTGTTGGCCACCAGTGTCATGGCCAACCCCACCAAGGTTGCTCGCGAG
CCTACCCTCGTCGAGCGTGACGCTGCCTCCATCACGAGCGTCCTCTCCGACATTAACACCCAGGTGCAGGCTCTT
GATTCGGCCATCAACTCTTACTCTGGAGGCGACCCCTCCAAGGTTGAGTCCGCCTCTTCCTCTTTGGTCTCGGAG
ATCAACTCTGGTGTCTCCACTGTCAACGGAGGCTCTGAGCTCAGCGCCACCGATGCTCTCACTATCACTGGCCCC
GTTCAGGACCTCACCAAGGAGGTGCAGACCACCATTGATGATCTGATTTCGAAGAAATCCGACTTCGTGTCTGCC
GGCGCCGGTGCCACTGTCTACTCCCAGCTGCAGAAGCAGTATACTGCTTCCAAGAACCTGGCCGATGCCATCACC
TCCAAGGTCCCGTCCTCTCTGTCTAGCATCGCCAGCTCCTTGTCTTCCGGTATCACCGACGCCATTCAGAAGGGT
GTCGATGCCTACAAGGACGTGGCTACCTCTTCCGCTAGCTCCTCCTCTGAGGCCTCCAGTGCTACCTCCGCTGCC
TCTACTGCCGATGCCACTACCGATGCCACTACTGCTGCCACCACTGCTGCCTCCACCACTGAGAGCTCTGCTGCT
TCCACCAGCTCCAGCCCCGTCATCCCCAGCTCTCCCAACAGCTCTGCTTCTGCTTCCGCCACTCCCAGCAGCTCT
GCCTCCGCTTCTGCCTCTGCCTCTCCCTCCCTTTACACCGGTGCTGCCAACGTGGAGCGCTTCAGCTACACCCTG
GGTGGTGCTGCTGTTGCTGCTGCCATTGCCATCGCTGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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