Protein ID | Ani_SJS100_1|g2562.t1 |
Gene name | |
Location | scaffold_010:509347..511736 |
Strand | - |
Gene length (bp) | 2389 |
Transcript length (bp) | 2205 |
Coding sequence length (bp) | 2205 |
Protein length (aa) | 735 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04547 | Anoctamin | Calcium-activated chloride channel | 1.9E-96 | 174 | 625 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 183 | 205 | 22 |
2 | 210 | 232 | 22 |
3 | 286 | 308 | 22 |
4 | 323 | 345 | 22 |
5 | 372 | 394 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2562.t1 MGLFAGHGALDQAELDNFGVDWVIHYSFEDVELSQAIQEFRTLIHDLQEAHLQVQVRHGYGASLLVCIRVPPDLL GNLVHKSRVKDWLHGIIHEFPEGGDEGETDADTPAEALRSVYHAVTWQKHLGGAGITPKVGQWKNITAAIPLHDR SANAELLRKWSRTIFLTAEDLDAIRALYGEKVAFYFAFIHCYSCFLIFPAVWGVFSWFYLGPYSITCAVVTCIWG IVFIEYWKTRELDLSLRWNVKDVGFLKVNRPEWVWDREFQNPHTGETIRVFSAHRQFARQLLMIPFATVASLALG SLIILSFALEILVSEVYNGPMKAYLEFLPTVLFSLSLPSITNILTEFAKRLTDYENYRTQDQYDLAQTAKTFVMH FITAFLPTLLTAFVYVPFGSRIAPYLDTLRSYGLLSANLAREIHIDTSRLQQEVIYLSATAQILNFGEEIVLPYV KQTLMHKWRDWREGRDSSRPRGYSQRTDQLLVDAPEEAGFLSRVRDEIDADEYDVHEDILEMCVQFGSLALFGVA WPLVSLGFLANNWLELRGDFFKLSLECQRPAPIRADSIGPSLLGLEVLSWLGTLSTAAIVYLYRAGLQEVNMSSL LLTLLLAEWAYVGVRFIVRSGLERISFISLRREESKRYAMRKRFLEATSGRVSPRAKPRVRFQDRVSVFSSSTDV PGTKEDFLHPGHHHEMGRGGRFWSWAPNETADAGVRLIKALNTNMDGSKTGPVKGAKGA* |
Coding | >Ani_SJS100_1|g2562.t1 ATGGGTCTCTTTGCTGGACACGGAGCCCTCGACCAGGCCGAACTGGATAATTTCGGCGTCGATTGGGTCATCCAC TACTCGTTCGAGGATGTCGAGCTCTCCCAGGCGATTCAAGAGTTTCGTACTTTAATCCACGACCTTCAAGAAGCG CATCTCCAGGTTCAAGTCCGTCATGGCTATGGCGCCTCCCTACTCGTCTGCATTCGTGTTCCACCTGATCTGTTA GGCAACCTGGTACACAAATCTCGTGTCAAGGACTGGCTCCATGGAATCATCCACGAATTCCCTGAGGGCGGAGAC GAGGGCGAAACTGACGCCGACACTCCTGCGGAGGCCCTCAGATCTGTTTACCATGCGGTGACATGGCAAAAGCAT CTTGGAGGCGCTGGAATTACCCCCAAGGTGGGCCAATGGAAGAATATTACGGCGGCTATTCCTCTGCATGACCGC TCCGCCAACGCGGAGCTGCTCCGGAAATGGAGTCGGACTATTTTCTTGACGGCCGAGGATCTTGACGCCATTCGC GCATTGTATGGCGAGAAGGTTGCTTTCTACTTTGCCTTCATCCATTGCTATTCCTGTTTCTTGATCTTTCCGGCC GTCTGGGGCGTCTTCTCATGGTTTTACCTGGGCCCCTATTCGATTACGTGTGCGGTGGTGACTTGCATCTGGGGG ATCGTGTTTATCGAATACTGGAAAACCCGCGAGCTCGATCTGAGCTTGCGCTGGAACGTCAAGGACGTAGGATTC CTAAAGGTGAACCGACCAGAATGGGTTTGGGACCGAGAATTCCAAAACCCGCACACCGGCGAGACCATCCGCGTG TTTTCGGCTCATAGGCAGTTTGCTCGCCAACTCCTGATGATCCCCTTTGCGACCGTGGCGAGCTTGGCATTGGGG AGCCTGATCATCCTATCATTTGCTCTGGAAATCTTGGTCTCGGAAGTATACAATGGCCCAATGAAGGCTTACCTG GAGTTTCTGCCGACCGTTCTGTTTTCGCTCTCCTTGCCCTCCATCACCAATATCCTGACGGAGTTTGCGAAGCGC TTGACCGACTACGAGAACTACCGCACGCAGGATCAATACGACCTGGCACAGACGGCCAAGACATTTGTGATGCAC TTTATTACGGCCTTTTTGCCCACGCTACTTACCGCATTTGTGTACGTCCCGTTTGGAAGCAGGATTGCTCCCTAT CTTGACACTCTGCGCTCTTACGGGCTCCTTTCTGCCAATCTTGCCCGCGAAATCCACATCGACACTTCCCGACTG CAACAGGAAGTGATCTATCTATCCGCGACCGCTCAGATCCTGAACTTCGGCGAGGAAATTGTGCTTCCCTATGTC AAGCAAACCTTGATGCACAAGTGGCGCGACTGGCGCGAAGGTCGGGACTCTTCGCGTCCTCGCGGCTACTCTCAG AGAACGGACCAACTCCTAGTGGACGCTCCGGAAGAAGCTGGTTTCCTTTCTCGTGTCCGTGACGAAATCGACGCG GACGAATACGACGTTCATGAAGATATTCTCGAGATGTGCGTGCAGTTCGGCTCTCTCGCTCTCTTTGGGGTTGCA TGGCCTTTGGTGTCACTGGGCTTCCTGGCCAACAACTGGCTGGAACTACGGGGCGACTTCTTCAAATTGAGCTTG GAGTGCCAAAGACCTGCCCCCATCCGCGCCGACTCGATCGGACCATCTCTCCTGGGTCTAGAAGTTCTCAGCTGG CTCGGTACCTTGTCCACAGCTGCCATCGTGTACCTCTACCGCGCTGGTCTCCAGGAAGTTAACATGTCGTCCCTT CTTCTTACCCTTCTCCTTGCCGAATGGGCCTACGTTGGCGTTCGCTTCATCGTGCGGAGCGGACTTGAAAGAATT AGCTTCATATCCCTTCGTCGCGAGGAGTCGAAGCGATACGCCATGCGCAAACGCTTCTTGGAAGCCACCTCGGGC CGGGTGTCCCCTCGGGCTAAACCGCGGGTTCGGTTCCAGGACCGGGTTAGCGTTTTCTCCTCGTCCACTGATGTC CCTGGTACTAAGGAAGACTTCCTGCATCCAGGGCATCACCATGAAATGGGCCGCGGAGGACGGTTCTGGTCGTGG GCTCCCAATGAGACAGCGGACGCAGGCGTTCGGCTGATCAAGGCCCTGAACACTAACATGGATGGTTCGAAGACC GGGCCTGTAAAGGGCGCCAAGGGCGCTTGA |
Transcript | >Ani_SJS100_1|g2562.t1 ATGGGTCTCTTTGCTGGACACGGAGCCCTCGACCAGGCCGAACTGGATAATTTCGGCGTCGATTGGGTCATCCAC TACTCGTTCGAGGATGTCGAGCTCTCCCAGGCGATTCAAGAGTTTCGTACTTTAATCCACGACCTTCAAGAAGCG CATCTCCAGGTTCAAGTCCGTCATGGCTATGGCGCCTCCCTACTCGTCTGCATTCGTGTTCCACCTGATCTGTTA GGCAACCTGGTACACAAATCTCGTGTCAAGGACTGGCTCCATGGAATCATCCACGAATTCCCTGAGGGCGGAGAC GAGGGCGAAACTGACGCCGACACTCCTGCGGAGGCCCTCAGATCTGTTTACCATGCGGTGACATGGCAAAAGCAT CTTGGAGGCGCTGGAATTACCCCCAAGGTGGGCCAATGGAAGAATATTACGGCGGCTATTCCTCTGCATGACCGC TCCGCCAACGCGGAGCTGCTCCGGAAATGGAGTCGGACTATTTTCTTGACGGCCGAGGATCTTGACGCCATTCGC GCATTGTATGGCGAGAAGGTTGCTTTCTACTTTGCCTTCATCCATTGCTATTCCTGTTTCTTGATCTTTCCGGCC GTCTGGGGCGTCTTCTCATGGTTTTACCTGGGCCCCTATTCGATTACGTGTGCGGTGGTGACTTGCATCTGGGGG ATCGTGTTTATCGAATACTGGAAAACCCGCGAGCTCGATCTGAGCTTGCGCTGGAACGTCAAGGACGTAGGATTC CTAAAGGTGAACCGACCAGAATGGGTTTGGGACCGAGAATTCCAAAACCCGCACACCGGCGAGACCATCCGCGTG TTTTCGGCTCATAGGCAGTTTGCTCGCCAACTCCTGATGATCCCCTTTGCGACCGTGGCGAGCTTGGCATTGGGG AGCCTGATCATCCTATCATTTGCTCTGGAAATCTTGGTCTCGGAAGTATACAATGGCCCAATGAAGGCTTACCTG GAGTTTCTGCCGACCGTTCTGTTTTCGCTCTCCTTGCCCTCCATCACCAATATCCTGACGGAGTTTGCGAAGCGC TTGACCGACTACGAGAACTACCGCACGCAGGATCAATACGACCTGGCACAGACGGCCAAGACATTTGTGATGCAC TTTATTACGGCCTTTTTGCCCACGCTACTTACCGCATTTGTGTACGTCCCGTTTGGAAGCAGGATTGCTCCCTAT CTTGACACTCTGCGCTCTTACGGGCTCCTTTCTGCCAATCTTGCCCGCGAAATCCACATCGACACTTCCCGACTG CAACAGGAAGTGATCTATCTATCCGCGACCGCTCAGATCCTGAACTTCGGCGAGGAAATTGTGCTTCCCTATGTC AAGCAAACCTTGATGCACAAGTGGCGCGACTGGCGCGAAGGTCGGGACTCTTCGCGTCCTCGCGGCTACTCTCAG AGAACGGACCAACTCCTAGTGGACGCTCCGGAAGAAGCTGGTTTCCTTTCTCGTGTCCGTGACGAAATCGACGCG GACGAATACGACGTTCATGAAGATATTCTCGAGATGTGCGTGCAGTTCGGCTCTCTCGCTCTCTTTGGGGTTGCA TGGCCTTTGGTGTCACTGGGCTTCCTGGCCAACAACTGGCTGGAACTACGGGGCGACTTCTTCAAATTGAGCTTG GAGTGCCAAAGACCTGCCCCCATCCGCGCCGACTCGATCGGACCATCTCTCCTGGGTCTAGAAGTTCTCAGCTGG CTCGGTACCTTGTCCACAGCTGCCATCGTGTACCTCTACCGCGCTGGTCTCCAGGAAGTTAACATGTCGTCCCTT CTTCTTACCCTTCTCCTTGCCGAATGGGCCTACGTTGGCGTTCGCTTCATCGTGCGGAGCGGACTTGAAAGAATT AGCTTCATATCCCTTCGTCGCGAGGAGTCGAAGCGATACGCCATGCGCAAACGCTTCTTGGAAGCCACCTCGGGC CGGGTGTCCCCTCGGGCTAAACCGCGGGTTCGGTTCCAGGACCGGGTTAGCGTTTTCTCCTCGTCCACTGATGTC CCTGGTACTAAGGAAGACTTCCTGCATCCAGGGCATCACCATGAAATGGGCCGCGGAGGACGGTTCTGGTCGTGG GCTCCCAATGAGACAGCGGACGCAGGCGTTCGGCTGATCAAGGCCCTGAACACTAACATGGATGGTTCGAAGACC GGGCCTGTAAAGGGCGCCAAGGGCGCTTGA |
Gene | >Ani_SJS100_1|g2562.t1 ATGGGTCTCTTTGCTGGACACGGAGCCCTCGACCAGGCCGAACTGGATAATTTCGGCGTCGATTGGGTCATCCAC TACTCGTTCGAGGATGTCGGTAAGTAATCATCCTTCCCGATTCCATCCGGCTGAACCCGATCTCACACCCTCTTC TTCCCTCCAGAGCTCTCCCAGGCGATTCAAGAGTTTCGTACTTTAATCCACGACCTTCAAGAAGCGCATCTCCAG GTTCAAGTCCGTCATGGCTATGGCGCCTCCCTACTCGTCTGCATTCGTGTTCCACCTGATCTGTTAGGCAACCTG GTACACAAATCTCGGTACGGCTGATTGGTAACAACATATGGCGCGTGGTCGGGAAAGCTAACGGCGTGTAGTGTC AAGGACTGGCTCCATGGAATCATCCACGAATTCCCTGAGGGCGGAGACGAGGGCGAAACTGACGCCGACACTCCT GCGGAGGCCCTCAGATCTGTTTACCATGCGGTGACATGGCAAAAGCATCTTGGAGGCGCTGGAATTACCCCCAAG GTGGGCCAATGGAAGAATATTACGGCGGCTATTCCTCTGCATGACCGCTCCGCCAACGCGGAGCTGCTCCGGAAA TGGAGTCGGACTATTTTCTTGACGGCCGAGGATCTTGACGCCATTCGCGCATTGTATGGCGAGAAGGTGCGTGTA TCTCGGAGCTTGTTCTGATTTTCCCGAGCATGTTTGATTTTAACATTCCCAGGTTGCTTTCTACTTTGCCTTCAT CCATTGCTATTCCTGTTTCTTGATCTTTCCGGCCGTCTGGGGCGTCTTCTCATGGTTTTACCTGGGCCCCTATTC GATTACGTGTGCGGTGGTGACTTGCATCTGGGGGATCGTGTTTATCGAATACTGGAAAACCCGCGAGCTCGATCT GAGCTTGCGCTGGAACGTCAAGGACGTAGGATTCCTAAAGGTGAACCGACCAGAATGGGTTTGGGACCGAGAATT CCAAAACCCGCACACCGGCGAGACCATCCGCGTGTTTTCGGCTCATAGGCAGTTTGCTCGCCAACTCCTGATGAT CCCCTTTGCGACCGTGGCGAGCTTGGCATTGGGGAGCCTGATCATCCTATCATTTGCTCTGGAAATCTTGGTCTC GGAAGTATACAATGGCCCAATGAAGGCTTACCTGGAGTTTCTGCCGACCGTTCTGTTTTCGCTCTCCTTGCCCTC CATCACCAATATCCTGACGGAGTTTGCGAAGCGCTTGACCGACTACGAGAACTACCGCACGCAGGATCAATACGA CCTGGCACAGACGGCCAAGACATTTGTGATGCACTTTATTACGGCCTTTTTGCCCACGCTACTTACCGCATTTGT GTACGTCCCGTTTGGAAGCAGGATTGCTCCCTATCTTGACACTCTGCGCTCTTACGGGCTCCTTTCTGCCAATCT TGCCCGCGAAATCCACATCGACACTTCCCGACTGCAACAGGAAGTGATCTATCTATCCGCGACCGCTCAGATCCT GAACTTCGGCGAGGAAATTGTGCTTCCCTATGTCAAGCAAACCTTGATGCACAAGTGGCGCGACTGGCGCGAAGG TCGGGACTCTTCGCGTCCTCGCGGCTACTCTCAGAGAACGGACCAACTCCTAGTGGACGCTCCGGAAGAAGCTGG TTTCCTTTCTCGTGTCCGTGACGAAATCGACGCGGACGAATACGACGTTCATGAAGATATTCTCGAGATGTGCGT GCAGTTCGGCTCTCTCGCTCTCTTTGGGGTTGCATGGCCTTTGGTGTCACTGGGCTTCCTGGCCAACAACTGGCT GGAACTACGGGGCGACTTCTTCAAATTGAGCTTGGAGTGCCAAAGACCTGCCCCCATCCGCGCCGACTCGATCGG ACCATCTCTCCTGGGTCTAGAAGTTCTCAGCTGGCTCGGTACCTTGTCCACAGCTGCCATCGTGTACCTCTACCG CGCTGGTCTCCAGGAAGTTAACATGTCGTCCCTTCTTCTTACCCTTCTCCTTGCCGAATGGGCCTACGTTGGCGT TCGCTTCATCGTGCGGAGCGGACTTGAAAGAATTAGCTTCATATCCCTTCGTCGCGAGGAGTCGAAGCGATACGC CATGCGCAAACGCTTCTTGGAAGCCACCTCGGGCCGGGTGTCCCCTCGGGCTAAACCGCGGGTTCGGTTCCAGGA CCGGGTTAGCGTTTTCTCCTCGTCCACTGATGTCCCTGGTACTAAGGAAGACTTCCTGCATCCAGGGCATCACCA TGAAATGGGCCGCGGAGGACGGTTCTGGTCGTGGGCTCCCAATGAGACAGCGGACGCAGGCGTTCGGCTGATCAA GGCCCTGAACACTAACATGGATGGTTCGAAGACCGGGCCTGTAAAGGGCGCCAAGGGCGCTTGA |