Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2554.t1
Gene name
Locationscaffold_010:476277..477499
Strand-
Gene length (bp)1222
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.9E-22 34 145
PF00153 Mito_carr Mitochondrial carrier protein 1.4E-21 154 243
PF00153 Mito_carr Mitochondrial carrier protein 7.2E-17 264 346

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2554.t1
MQPVAHQSGGASGDPLPPSLPTEAIEEKASVSSLGSWNHLVAGATGGMVTAIVTSPLDVLRTRLQTDYYQTQGVN
RSIPTHAHVRQSFVRTSIRHFRETFGILFSIHRVEGWRGMFKGLGPSLTGVVPASAVKFYTYGNCKRLLPEILGC
DKDTTLVHAMSAACAGIATGSATNPIWVVKTRLQLDKAGARRYKNSLDCTKQILQQEGPKGLYRGLTASYLGTIE
TTLHLAMYERIKGLISKEVNLDKNSDSNKFVQGLALSGASGLSKLFACLIAYPHEVIRTRLRQAPMADGRQKYTS
ILQCARLILKEEGVIALYGGLTAHLLRTVPSAAITIGTYELVLKVLEGR*
Coding >Ani_SJS100_1|g2554.t1
ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATC
GAAGAGAAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGCTACCGGCGGCATGGTCACT
GCTATCGTTACGAGTCCTCTTGATGTTCTCCGCACGCGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAAC
CGCTCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTATCCGCCATTTTCGCGAGACGTTC
GGCATTCTCTTCTCTATCCATCGTGTTGAAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGT
GTCGTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCTGCTGCCGGAGATCTTGGGTTGC
GACAAGGATACTACTCTGGTACATGCCATGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCT
ATTTGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTACAAGAACAGTCTTGATTGTACC
AAGCAGATTCTGCAACAAGAGGGTCCCAAGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAA
ACAACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGAGGTCAATTTGGATAAGAACTCG
GATTCGAACAAGTTTGTTCAGGGCCTTGCTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATC
GCGTATCCCCATGAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAAGTATACTAGT
ATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAGTGATCGCGCTGTATGGAGGATTGACGGCACACCTT
CTCCGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGAGGGACGTTAA
Transcript >Ani_SJS100_1|g2554.t1
ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATC
GAAGAGAAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGCTACCGGCGGCATGGTCACT
GCTATCGTTACGAGTCCTCTTGATGTTCTCCGCACGCGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAAC
CGCTCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTATCCGCCATTTTCGCGAGACGTTC
GGCATTCTCTTCTCTATCCATCGTGTTGAAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGT
GTCGTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCTGCTGCCGGAGATCTTGGGTTGC
GACAAGGATACTACTCTGGTACATGCCATGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCT
ATTTGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTACAAGAACAGTCTTGATTGTACC
AAGCAGATTCTGCAACAAGAGGGTCCCAAGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAA
ACAACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGAGGTCAATTTGGATAAGAACTCG
GATTCGAACAAGTTTGTTCAGGGCCTTGCTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATC
GCGTATCCCCATGAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAAGTATACTAGT
ATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAGTGATCGCGCTGTATGGAGGATTGACGGCACACCTT
CTCCGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGAGGGACGTTAA
Gene >Ani_SJS100_1|g2554.t1
ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATC
GAAGAGAAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGCGTGAGTTGATTCAATGCTA
TCATTGAGAAGCTGAATACTGACGTTTTATTATAGTACCGGCGGCATGGTCACTGCTATCGTTACGAGTCCTCTT
GATGTTCTCCGCACGCGGTAGGATAAGCCTTCAACTCAAGCAACAACCCAGCTTTGCATGCTAACGTATCTTGTG
CTTCCTAGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGCTCAATTCCCACACACGCGCACGTTCGT
CAGTCATTCGTTCGGACTTCTATCCGCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTGAA
GGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTCGTCCCGGCCAGTGCGGTGAAGTTCTAC
ACATACGGAAACTGCAAACGCCTGCTGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCATG
TCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATTTGGGTGGTCAAAACTCGTCTTCAGTTG
GATAAGGCTGGTGCTCGCCGGTACAAGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCAAG
GGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACAACACTGCATCTGGCCATGTATGAGCGC
ATCAAGGGACTTATTTCCAAGGAGGTCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTGCT
CTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCGTATCCCCATGAGGTGAGTTGACGCGTC
GCGAATCCCAGCATATGCATCTTCTGACATTTTGCAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGA
CGGTCGCCAGAAGTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAGTGATCGCGCTGTA
TGGAGGATTGACGGCACACCTTCTCCGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCT
CAAGGTCCTTGAGGGACGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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