Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2494.t1
Gene name
Locationscaffold_010:307480..308465
Strand+
Gene length (bp)985
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 7 25 18
2 258 280 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2494.t1
MRSMSRLFILCLLLLLGTVTSAWPWRPHGELLRRADTTAAESATTGAAATTESASKTEAATKTAAATGTDTTATA
TGTNTKSATKTGTASGKSSGSSSNSTTSVSINPAAGAGGISMLIPTEGATSYYKIGDFVTLEWNYTSLTISPTAV
NVVASCSLNSATYTISSNMTMSPTGKVVWDTKKYQANATVPLLTASYTLIVWDASKAITETASAGYLSAASSYIF
GMYSSQPYTPLNGFVCATCSGAFSELERLGMKFTFGMFAITVLSFTWFAGGFGLFST*
Coding >Ani_SJS100_1|g2494.t1
ATGCGTTCCATGTCTCGTCTGTTTATTCTGTGCCTCCTCTTGCTGTTGGGGACGGTAACTTCGGCCTGGCCATGG
CGGCCACATGGTGAATTGTTGCGACGAGCTGATACTACCGCAGCTGAGAGCGCAACCACTGGAGCCGCCGCTACC
ACCGAGAGTGCATCGAAGACCGAGGCAGCGACCAAGACCGCCGCCGCAACAGGAACCGATACCACGGCCACGGCC
ACCGGCACCAATACCAAGTCAGCTACCAAAACAGGCACAGCTAGCGGCAAGTCCTCTGGCTCTTCCTCAAACAGC
ACAACGAGTGTTTCTATCAACCCCGCTGCCGGTGCTGGTGGTATCTCTATGCTCATTCCCACCGAGGGAGCCACA
TCCTACTACAAGATTGGCGATTTTGTGACATTGGAATGGAACTACACCTCGTTGACCATCAGCCCAACGGCTGTC
AACGTCGTCGCGTCCTGCAGTTTGAACAGTGCCACCTACACCATCTCGTCCAACATGACCATGTCGCCTACCGGA
AAGGTGGTCTGGGACACCAAGAAGTACCAGGCCAACGCGACTGTTCCGCTGTTGACAGCATCGTACACGTTGATC
GTTTGGGATGCCAGCAAGGCCATCACTGAGACGGCTAGTGCCGGTTATCTCAGTGCTGCTAGCAGTTACATTTTC
GGAATGTACAGCTCGCAGCCGTACACTCCGCTCAATGGATTTGTCTGCGCTACCTGCAGCGGCGCTTTCTCCGAG
CTCGAACGGCTAGGGATGAAATTCACTTTTGGCATGTTCGCCATCACCGTCCTGTCCTTCACCTGGTTCGCCGGG
GGCTTCGGTCTCTTCTCCACATGA
Transcript >Ani_SJS100_1|g2494.t1
ATGCGTTCCATGTCTCGTCTGTTTATTCTGTGCCTCCTCTTGCTGTTGGGGACGGTAACTTCGGCCTGGCCATGG
CGGCCACATGGTGAATTGTTGCGACGAGCTGATACTACCGCAGCTGAGAGCGCAACCACTGGAGCCGCCGCTACC
ACCGAGAGTGCATCGAAGACCGAGGCAGCGACCAAGACCGCCGCCGCAACAGGAACCGATACCACGGCCACGGCC
ACCGGCACCAATACCAAGTCAGCTACCAAAACAGGCACAGCTAGCGGCAAGTCCTCTGGCTCTTCCTCAAACAGC
ACAACGAGTGTTTCTATCAACCCCGCTGCCGGTGCTGGTGGTATCTCTATGCTCATTCCCACCGAGGGAGCCACA
TCCTACTACAAGATTGGCGATTTTGTGACATTGGAATGGAACTACACCTCGTTGACCATCAGCCCAACGGCTGTC
AACGTCGTCGCGTCCTGCAGTTTGAACAGTGCCACCTACACCATCTCGTCCAACATGACCATGTCGCCTACCGGA
AAGGTGGTCTGGGACACCAAGAAGTACCAGGCCAACGCGACTGTTCCGCTGTTGACAGCATCGTACACGTTGATC
GTTTGGGATGCCAGCAAGGCCATCACTGAGACGGCTAGTGCCGGTTATCTCAGTGCTGCTAGCAGTTACATTTTC
GGAATGTACAGCTCGCAGCCGTACACTCCGCTCAATGGATTTGTCTGCGCTACCTGCAGCGGCGCTTTCTCCGAG
CTCGAACGGCTAGGGATGAAATTCACTTTTGGCATGTTCGCCATCACCGTCCTGTCCTTCACCTGGTTCGCCGGG
GGCTTCGGTCTCTTCTCCACATGA
Gene >Ani_SJS100_1|g2494.t1
ATGCGTTCCATGTCTCGTCTGTTTATTCTGTGCCTCCTCTTGCTGTTGGGGACGGTAACTTCGGCCTGGCCATGG
CGGCCACATGGTGAATTGTTGCGACGAGCTGGTTAGTTCCGTCTTTTGGCATTACCTTCTACCACTGTCCTATTT
TTTTTATCGTGCTTCGTGTGTGATGTGTTGCTGATTCGCGAAGATACTACCGCAGCTGAGAGCGCAACCACTGGA
GCCGCCGCTACCACCGAGAGTGCATCGAAGACCGAGGCAGCGACCAAGACCGCCGCCGCAACAGGAACCGATACC
ACGGCCACGGCCACCGGCACCAATACCAAGTCAGCTACCAAAACAGGCACAGCTAGCGGCAAGTCCTCTGGCTCT
TCCTCAAACAGCACAACGAGTGTTTCTATCAACCCCGCTGCCGGTGCTGGTGGTATCTCTATGCTCATTCCCACC
GAGGGAGCCACATCCTACTACAAGATTGGCGATTTTGTGACATTGGAATGGAACTACACCTCGTTGACCATCAGC
CCAACGGCTGTCAACGTCGTCGCGTCCTGCAGTTTGAACAGTGCCACCTACACCATCTCGTCCAACATGACCATG
TCGCCTACCGGAAAGGTGGTCTGGGACACCAAGAAGTACCAGGCCAACGCGACTGTTCCGCTGTTGACAGCATCG
TACACGTTGATCGTTTGGGATGCCAGCAAGGCCATCACTGAGACGGCTAGTGCCGGTTATCTCAGTGCTGCTAGC
AGTTACATTTTCGGAATGTACAGCTCGCAGCCGTACACTCCGCTCAATGGTATGTTATCGCCTCTATATATCGTA
ATGAACCTGCTAACTCCCGACAGGATTTGTCTGCGCTACCTGCAGCGGCGCTTTCTCCGAGCTCGAACGGCTAGG
GATGAAATTCACTTTTGGCATGTTCGCCATCACCGTCCTGTCCTTCACCTGGTTCGCCGGGGGCTTCGGTCTCTT
CTCCACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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