Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2472.t1
Gene name
Locationscaffold_010:238091..238544
Strand+
Gene length (bp)453
Transcript length (bp)222
Coding sequence length (bp)222
Protein length (aa) 74

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11022 ATP19 ATP synthase subunit K 7.6E-28 1 65

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2472.t1
MVVYYQIAGKQVGSHVLAMGVLGALFGGVGLATRGGSQPKPATPPIQASSKDEETFIQDFLKQVNGEEKKKDH*
Coding >Ani_SJS100_1|g2472.t1
ATGGTCGTCTACTACCAGATCGCCGGCAAGCAGGTCGGCTCCCACGTTCTCGCCATGGGCGTTCTCGGTGCTCTC
TTCGGCGGTGTTGGTCTCGCTACTCGTGGTGGTAGCCAGCCCAAGCCTGCCACCCCTCCCATCCAGGCTTCCTCC
AAGGATGAGGAGACCTTCATTCAGGACTTCTTGAAACAAGTGAACGGAGAAGAGAAAAAGAAAGACCATTAG
Transcript >Ani_SJS100_1|g2472.t1
ATGGTCGTCTACTACCAGATCGCCGGCAAGCAGGTCGGCTCCCACGTTCTCGCCATGGGCGTTCTCGGTGCTCTC
TTCGGCGGTGTTGGTCTCGCTACTCGTGGTGGTAGCCAGCCCAAGCCTGCCACCCCTCCCATCCAGGCTTCCTCC
AAGGATGAGGAGACCTTCATTCAGGACTTCTTGAAACAAGTGAACGGAGAAGAGAAAAAGAAAGACCATTAG
Gene >Ani_SJS100_1|g2472.t1
ATGGTCGTCTACTACCAGATCGCCGGCAAGCAGGTCGGCTCCCACGTTGTACGTCTCCGTTGCCGCCCTGTCTCA
ACCCTTCCCCTGTCCGGGACCAATCTCTGCCGAGGTCATAACATCGGCCGATGGCACACTCTGCCAGCTGCCTGG
GAACTCTCACACTGACTACTTGACTATGTATAGCTCGCCATGGGCGTTCTCGGTGCTCTCTTCGGCGGTGTTGGT
CTCGCTACTCGTGGTGGTAGCCAGCCCAAGCCTGCCACCCCTCCCATCCAGGCTTCCTCCAAGGATGAGGAGACC
TTCATTCAGTACGTCTCCACCTTTATAACAGATGAACCTATCTGCAATTAGGACTATGAAGGATATGGTTGGAAT
TTTTGAACTCAAGCTAATGTTTATAACAGGGACTTCTTGAAACAAGTGAACGGAGAAGAGAAAAAGAAAGACCAT
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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