© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2424.t1 |
| Gene name | |
| Location | scaffold_010:81348..82985 |
| Strand | - |
| Gene length (bp) | 1637 |
| Transcript length (bp) | 1440 |
| Coding sequence length (bp) | 1440 |
| Protein length (aa) | 480 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03595 | SLAC1 | Voltage-dependent anion channel | 3.2E-77 | 100 | 441 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 100 | 122 | 22 |
| 2 | 135 | 157 | 22 |
| 3 | 172 | 194 | 22 |
| 4 | 206 | 228 | 22 |
| 5 | 238 | 260 | 22 |
| 6 | 273 | 295 | 22 |
| 7 | 310 | 332 | 22 |
| 8 | 353 | 375 | 22 |
| 9 | 388 | 410 | 22 |
| 10 | 417 | 439 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2424.t1 MTPDRLFPRHLRSPGDDGYRTPTIEDTQNDLAENSGGDSYFHPRGSIISQAHTSALDAIHSSSYRKSEGDGDEGV DGMAYPQSEAETRPSGLGWKKRIRHITWAFFTLTMATGGIANVLYFVPYRFRGLETIGIIFFLANLFLYLLIWCL LITRFYLYPYTFKASFLHPTESLFVPASLVSFGTILINISQYGPDHTGPWLTYAVGILFWIDAALAVISSAAIYL ILWSTQTFTIAQMTPIWIFPAYPMLIIGPHAGILSSKLEPARSLRIIIGGTTIQGVGFLVSLMVYSAFIYRLMSQ KLPRENVRPGMFVSVGPSAFTVSGIVNMAAHAKRSFPEDFMGNGALAADIVKVVANFSCLWLWGLAIFFFFIASF AHWSAIGPGRMVFSMAWFSFVFPNTALITATFAIGKAFSCKAISIIGCAMVFPLILMYIFVFYMMVRAIVHRQIL WPQKGEDKDEGGFEVNRIKPESPGEITPV* |
| Coding | >Ani_SJS100_1|g2424.t1 ATGACTCCGGATCGCTTGTTTCCTAGACACTTGAGAAGCCCAGGGGATGATGGCTACCGAACTCCAACCATTGAA GATACGCAAAATGACCTTGCAGAAAATTCTGGCGGGGATTCTTATTTCCACCCAAGAGGATCTATAATAAGCCAA GCCCATACCTCGGCATTAGACGCCATTCACAGCTCTTCATATCGCAAGTCAGAAGGAGATGGGGACGAGGGTGTG GATGGCATGGCTTATCCCCAGAGTGAAGCTGAAACCAGACCATCTGGTCTTGGGTGGAAGAAGCGTATTCGTCAC ATTACCTGGGCATTTTTCACCCTGACTATGGCAACGGGAGGCATCGCAAATGTTTTGTACTTTGTACCCTATAGA TTTCGCGGCTTGGAAACCATTGGAATCATCTTCTTTCTAGCCAACTTATTCCTCTACCTCTTAATCTGGTGTCTT TTGATCACACGATTCTACCTATACCCTTACACTTTCAAAGCATCTTTTCTACACCCGACAGAATCCTTATTTGTT CCAGCTTCGCTGGTCTCTTTCGGGACGATCCTGATCAATATCTCACAGTATGGACCCGACCATACAGGGCCCTGG CTCACATATGCGGTTGGAATCCTCTTTTGGATTGACGCAGCCCTGGCAGTCATCTCTTCTGCCGCTATCTACCTC ATTCTATGGTCGACCCAGACATTTACAATTGCACAAATGACACCTATTTGGATCTTTCCTGCGTACCCAATGCTT ATAATTGGCCCTCATGCTGGGATCCTGAGCTCCAAACTTGAGCCTGCTCGCTCTTTGCGAATCATAATCGGTGGT ACCACTATCCAAGGCGTTGGCTTCTTGGTATCCCTGATGGTGTACTCGGCGTTTATTTACCGGCTGATGTCGCAA AAGCTGCCCCGAGAAAATGTCCGACCAGGTATGTTCGTGTCGGTTGGTCCCAGTGCCTTTACTGTGTCTGGGATT GTCAATATGGCCGCCCATGCCAAAAGAAGCTTCCCGGAGGATTTCATGGGCAATGGTGCATTAGCTGCAGACATT GTGAAAGTTGTTGCTAACTTTTCCTGCTTATGGCTATGGGGGCTAGCAATATTTTTCTTCTTCATTGCAAGCTTC GCACATTGGTCTGCCATTGGACCGGGCCGGATGGTCTTTTCCATGGCATGGTTCTCATTTGTGTTCCCAAATACA GCACTGATAACGGCGACCTTTGCAATTGGAAAGGCTTTCTCGTGCAAGGCAATATCCATCATCGGCTGCGCTATG GTATTTCCGCTTATCTTGATGTATATCTTCGTCTTCTATATGATGGTGCGTGCCATCGTGCATCGCCAAATACTC TGGCCTCAGAAGGGCGAAGATAAAGACGAAGGAGGCTTTGAGGTCAACCGAATCAAGCCTGAGTCACCAGGTGAA ATTACACCTGTATGA |
| Transcript | >Ani_SJS100_1|g2424.t1 ATGACTCCGGATCGCTTGTTTCCTAGACACTTGAGAAGCCCAGGGGATGATGGCTACCGAACTCCAACCATTGAA GATACGCAAAATGACCTTGCAGAAAATTCTGGCGGGGATTCTTATTTCCACCCAAGAGGATCTATAATAAGCCAA GCCCATACCTCGGCATTAGACGCCATTCACAGCTCTTCATATCGCAAGTCAGAAGGAGATGGGGACGAGGGTGTG GATGGCATGGCTTATCCCCAGAGTGAAGCTGAAACCAGACCATCTGGTCTTGGGTGGAAGAAGCGTATTCGTCAC ATTACCTGGGCATTTTTCACCCTGACTATGGCAACGGGAGGCATCGCAAATGTTTTGTACTTTGTACCCTATAGA TTTCGCGGCTTGGAAACCATTGGAATCATCTTCTTTCTAGCCAACTTATTCCTCTACCTCTTAATCTGGTGTCTT TTGATCACACGATTCTACCTATACCCTTACACTTTCAAAGCATCTTTTCTACACCCGACAGAATCCTTATTTGTT CCAGCTTCGCTGGTCTCTTTCGGGACGATCCTGATCAATATCTCACAGTATGGACCCGACCATACAGGGCCCTGG CTCACATATGCGGTTGGAATCCTCTTTTGGATTGACGCAGCCCTGGCAGTCATCTCTTCTGCCGCTATCTACCTC ATTCTATGGTCGACCCAGACATTTACAATTGCACAAATGACACCTATTTGGATCTTTCCTGCGTACCCAATGCTT ATAATTGGCCCTCATGCTGGGATCCTGAGCTCCAAACTTGAGCCTGCTCGCTCTTTGCGAATCATAATCGGTGGT ACCACTATCCAAGGCGTTGGCTTCTTGGTATCCCTGATGGTGTACTCGGCGTTTATTTACCGGCTGATGTCGCAA AAGCTGCCCCGAGAAAATGTCCGACCAGGTATGTTCGTGTCGGTTGGTCCCAGTGCCTTTACTGTGTCTGGGATT GTCAATATGGCCGCCCATGCCAAAAGAAGCTTCCCGGAGGATTTCATGGGCAATGGTGCATTAGCTGCAGACATT GTGAAAGTTGTTGCTAACTTTTCCTGCTTATGGCTATGGGGGCTAGCAATATTTTTCTTCTTCATTGCAAGCTTC GCACATTGGTCTGCCATTGGACCGGGCCGGATGGTCTTTTCCATGGCATGGTTCTCATTTGTGTTCCCAAATACA GCACTGATAACGGCGACCTTTGCAATTGGAAAGGCTTTCTCGTGCAAGGCAATATCCATCATCGGCTGCGCTATG GTATTTCCGCTTATCTTGATGTATATCTTCGTCTTCTATATGATGGTGCGTGCCATCGTGCATCGCCAAATACTC TGGCCTCAGAAGGGCGAAGATAAAGACGAAGGAGGCTTTGAGGTCAACCGAATCAAGCCTGAGTCACCAGGTGAA ATTACACCTGTATGA |
| Gene | >Ani_SJS100_1|g2424.t1 ATGACTCCGGATCGCTTGTTTCCTAGACACTTGAGAAGCCCAGGGGATGATGGCTACCGAACTCCAACCATTGAA GATACGCAAAATGACCTTGCAGAAAATTCTGGCGGGGATTCTTATTTCCACCCAAGAGGATCTATAATAAGCCAA GCCCATACCTCGGCATTAGACGCCATTCACAGCTCTTCATATCGCAAGTCAGAAGGAGATGGGGACGAGGGTGTG GATGGCATGGCTTATCCCCAGAGTGAAGCTGAAACCAGACCATCTGGTCTTGGGTGGAAGAAGCGTATTCGTCAC ATTACCTGGGCATTTTTCACCCTGACTATGGCAACGGGAGGCATCGCAAATGTTTTGTACTTTGGTGAGTGCGTT CTTGTCCTACGATAGGTATAGGGTGAATGTACTGATTACCGGTATGAAATAGTACCCTATAGATTTCGCGGCTTG GAAACCATTGGAATCATCTTCTTTCTAGCCAACTTATTCCTCTACCTCTTAATCTGGTGTCTTTTGATCACACGA TTCTACCTATACCCTTACACTTTCAAAGCATCTTTTCTACACCCGACAGAATCCTTATTTGTTCCAGCTTCGCTG GTCTCTTTCGGGACGATCCTGATCAATATCTCACAGTATGGACCCGACCATACAGGGCCCTGGCTCACATATGCG GTTGGAATCCTCTTTTGGATTGACGCAGCCCTGGCAGTCATCTCTTCTGCCGCTATCTACCTCATTCTGTGAGTA CAAAGACTCCTGACATTAATCTTGTGAGCCTAAAATTTAAGCAGGACAACTAATGCGCTGTAGATGGTCGACCCA GACATTTACAATTGCACAAATGACACCTATTTGGATCTTTCCTGCGTACCCAATGCTTATAATTGGCCCTCATGC TGGGATCCTGAGCTCCAAACTTGAGCCTGCTCGCTCTTTGCGAATCATAATCGGTGGTACCACTATCCAAGGCGT TGGCTTCTTGGTATCCCTGATGGTGTACTCGGCGTTTATTTACCGGCTGATGTCGCAAAAGCTGCCCCGAGAAAA TGTCCGACCAGGTATGTTCGTGTCGGTTGGTCCCAGTGCCTTTACTGTGTCTGGGATTGTCAATATGGCCGCCCA TGCCAAAAGAAGCTTCCCGGAGGATTTCATGGGCAATGGTGCATTAGCTGCAGACATTGTGAAAGTTGTTGCTAA CTTTTCCTGCTTATGGCTATGGGGGTAAGGATGACCGGCCCACCTACATTGATAAATTCTACGAGGTCCGTACTA ATGCATGACTCAGGCTAGCAATATTTTTCTTCTTCATTGCAAGCTTCGCACATTGGTCTGCCATTGGACCGGGCC GGATGGTCTTTTCCATGGCATGGTTCTCATTTGTGTTCCCAAATACAGCACTGATAACGGCGACCTTTGCAATTG GAAAGGCTTTCTCGTGCAAGGCAATATCCATCATCGGCTGCGCTATGGTATTTCCGCTTATCTTGATGTATATCT TCGTCTTCTATATGATGGTGCGTGCCATCGTGCATCGCCAAATACTCTGGCCTCAGAAGGGCGAAGATAAAGACG AAGGAGGCTTTGAGGTCAACCGAATCAAGCCTGAGTCACCAGGTGAAATTACACCTGTATGA |