Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2418.t1
Gene name
Locationscaffold_010:67863..68823
Strand+
Gene length (bp)960
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00179 UQ_con Ubiquitin-conjugating enzyme 6.2E-20 9 120

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

Domain # Start End Length
1 253 270 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2418.t1
MATKAAFKRLTREYQNIQKNPPPYIVAHPSESNILEWHYILTGPPGTPYENGQYWGTLMFPPEYPFAPPAIRMHT
PSGRFQPSTRLCLSISDFHPKSFNPAWEVSTILIGLLSFMTSEEMTTGSVSASEAERRVLAARSRWWNSTGGGSH
VSATPGVTPTAKGINNVKAGDGGLKFRSEWPELDQENWRWMKDSRIDTNTGQLMPDPSATRCSPETSALRRRPNG
SAPGLGAVMEGGHVAREAGQSWVRRNKIWLGFAILFGYALLTRLVKDVQG*
Coding >Ani_SJS100_1|g2418.t1
ATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTACATT
GTGGCACATCCGTCAGAGTCCAACATACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAA
AATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCACACT
CCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCC
GCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGCGTG
AGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCAT
GTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTGAAG
TTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACT
GGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAACGGT
AGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGC
AACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAAGGC
TAA
Transcript >Ani_SJS100_1|g2418.t1
ATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTACATT
GTGGCACATCCGTCAGAGTCCAACATACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAA
AATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCACACT
CCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCC
GCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGCGTG
AGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCAT
GTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTGAAG
TTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACT
GGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAACGGT
AGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGC
AACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAAGGC
TAA
Gene >Ani_SJS100_1|g2418.t1
ATGGCGACAAAAGCGGCTTTCAAGCGCGTGCGTTGCGCCCTTTCAAAATGCGGTCATTTTATTGCATTGTATAAC
TAACAGATGAACAGCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGT
CAGAGTCCAACATACTCGAGTACGTCATTTACAACAGACTATCACCACCTGCGTCGCTTGTTTGCGACTAAAGTT
GACCTTTCATTCAGATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAAAATGGCCAGTATTGGGGT
ACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCACACTCCTAGCGGTCGTTTTCAA
CCATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCCGCATGGGAGGTTTCTACC
ATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGCGTGAGTGCATCGGAGGCAGAG
CGACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCATGTCAGTGCCACCCCAGGA
GTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTGAAGTTTCGCTCGGAGTGGCCA
GAGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACTGGCCAGCTCATGCCTGAT
CCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAACGGTAGCGCCCCGGGACTCGGT
GCGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGCAACAAGATCTGGCTTGGG
TTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAAGGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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