Protein ID | Ani_SJS100_1|g2398.t1 |
Gene name | |
Location | scaffold_010:4623..6733 |
Strand | + |
Gene length (bp) | 2110 |
Transcript length (bp) | 1830 |
Coding sequence length (bp) | 1830 |
Protein length (aa) | 610 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08637 | NCA2 | ATP synthase regulation protein NCA2 | 3.0E-98 | 333 | 605 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 52 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 485 | 507 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2398.t1 MYAINNRAYGLDTHFDKLWRRINDDAHPKSLEFYEHASQANYPIENVAKLEKFMDSLSMTSKSQPLLQTERLLKI IAEYPEDVVNGDYTSSDVKVFMTHVVDTSWLVAAKAAVQTLGIILNTLSDDVLSLNDEMLYWDSVLESPWSLGLY MIQNSPVVLWSRFRKAWRHANSTNNRRTPGQTGWMKFYESVPKSDVRQKRKTLSSLKDMNASSIGILIRKSFSRE VGDEYSGDDSYGMFNESWQVNVLEGVALMKLLLEDPEKESATWNYEEHINMAINQEVSSMRMHYCTGLSSEGPRF VMSQLGYILEKLLPAYAKASATTINNAGRPHYLLLRNKRHELLEWVANFGSTTIEFWNNWVVDPIHRLIGTIRHD EKSEIALMSRNSLEADRASLERMVVDFILDRCEPNKNDYDAFDTHVITAKVREGDLTPVLKAYENDLRSPFVGTI KGDLVRALLIQIQKTKVDVEIAIGGIDALLKSQELVFGFIGLTPGIMVSYATLRWLYSLLGSRRGLRTGKQQDQL RHALRVVHRTLTSSVPTPGDTLAFRDYGLLICNAEVLLSKARTILKGADLRSFQEDINELVERDTIDRQLKVVER MGWVYSRWI* |
Coding | >Ani_SJS100_1|g2398.t1 ATGTATGCGATCAACAACAGAGCGTACGGTCTGGATACACATTTTGATAAATTGTGGCGGCGAATAAACGATGAT GCCCATCCGAAATCGCTAGAGTTCTACGAACATGCAAGTCAAGCGAACTACCCCATTGAGAATGTCGCAAAACTG GAGAAGTTTATGGACTCACTTTCCATGACATCCAAGTCTCAACCATTATTGCAGACGGAGAGGCTTTTAAAAATA ATTGCCGAATACCCTGAGGATGTGGTCAATGGCGATTACACGTCCTCAGACGTGAAAGTATTCATGACACACGTC GTAGACACTTCTTGGCTCGTAGCTGCCAAGGCTGCAGTGCAGACTCTCGGGATTATACTGAATACACTATCGGAT GATGTACTCTCCCTCAACGACGAGATGCTCTATTGGGACAGCGTTTTGGAATCCCCCTGGTCACTAGGGCTTTAT ATGATCCAGAATTCACCAGTGGTGCTTTGGAGCCGATTTCGAAAAGCCTGGCGCCATGCTAACTCTACGAACAAC CGCCGGACGCCCGGCCAAACCGGTTGGATGAAATTCTACGAATCTGTTCCGAAGTCAGATGTACGACAGAAGCGG AAGACCCTGAGCTCATTGAAGGATATGAACGCTAGTAGCATCGGGATCCTCATAAGGAAGAGTTTCTCCCGCGAA GTGGGCGATGAATATTCAGGCGACGATAGCTATGGCATGTTTAATGAGAGCTGGCAGGTCAACGTTCTTGAGGGT GTGGCTTTGATGAAATTGCTCCTCGAAGATCCGGAAAAGGAAAGTGCCACATGGAATTACGAAGAGCACATAAAC ATGGCGATCAATCAAGAAGTCTCGTCGATGCGCATGCATTACTGCACTGGTCTATCCTCTGAGGGTCCGAGATTC GTCATGAGCCAATTGGGCTATATACTTGAAAAGCTTCTACCGGCCTATGCTAAAGCTTCAGCCACAACAATCAAC AACGCTGGTCGCCCTCATTACCTACTTTTAAGGAATAAACGCCATGAGCTCTTGGAATGGGTTGCCAATTTCGGT TCAACCACGATCGAGTTTTGGAACAATTGGGTTGTAGACCCAATTCACAGGCTTATCGGAACTATAAGGCATGAT GAAAAGAGTGAAATTGCACTGATGAGTAGAAACAGCTTGGAAGCCGATCGAGCGAGTCTGGAAAGGATGGTTGTG GACTTCATTCTTGATCGTTGTGAACCGAACAAAAATGATTATGATGCCTTTGATACTCATGTCATCACGGCTAAA GTTCGGGAAGGTGACTTGACACCAGTGCTGAAAGCATACGAAAATGACCTACGTAGTCCCTTTGTTGGGACCATT AAGGGTGATTTGGTGCGAGCACTTCTAATACAGATACAGAAGACAAAAGTAGATGTTGAGATTGCGATAGGGGGA ATTGACGCTCTGTTGAAAAGCCAAGAGCTGGTTTTCGGGTTTATTGGACTAACCCCAGGCATAATGGTGTCATAT GCGACTCTTCGTTGGCTTTACAGCTTGCTTGGCAGTCGAAGGGGCTTGCGAACGGGTAAGCAGCAGGACCAATTG AGGCATGCTTTGCGGGTTGTCCATCGGACTTTAACATCATCTGTCCCCACTCCTGGCGATACCCTCGCGTTTAGA GACTATGGTCTCCTCATATGCAATGCTGAAGTCCTACTTTCAAAGGCGCGGACCATACTGAAAGGCGCAGATCTC CGCTCATTTCAGGAAGACATTAATGAATTAGTCGAGCGAGATACAATTGACCGGCAACTCAAGGTTGTTGAAAGA ATGGGTTGGGTATACTCAAGATGGATCTGA |
Transcript | >Ani_SJS100_1|g2398.t1 ATGTATGCGATCAACAACAGAGCGTACGGTCTGGATACACATTTTGATAAATTGTGGCGGCGAATAAACGATGAT GCCCATCCGAAATCGCTAGAGTTCTACGAACATGCAAGTCAAGCGAACTACCCCATTGAGAATGTCGCAAAACTG GAGAAGTTTATGGACTCACTTTCCATGACATCCAAGTCTCAACCATTATTGCAGACGGAGAGGCTTTTAAAAATA ATTGCCGAATACCCTGAGGATGTGGTCAATGGCGATTACACGTCCTCAGACGTGAAAGTATTCATGACACACGTC GTAGACACTTCTTGGCTCGTAGCTGCCAAGGCTGCAGTGCAGACTCTCGGGATTATACTGAATACACTATCGGAT GATGTACTCTCCCTCAACGACGAGATGCTCTATTGGGACAGCGTTTTGGAATCCCCCTGGTCACTAGGGCTTTAT ATGATCCAGAATTCACCAGTGGTGCTTTGGAGCCGATTTCGAAAAGCCTGGCGCCATGCTAACTCTACGAACAAC CGCCGGACGCCCGGCCAAACCGGTTGGATGAAATTCTACGAATCTGTTCCGAAGTCAGATGTACGACAGAAGCGG AAGACCCTGAGCTCATTGAAGGATATGAACGCTAGTAGCATCGGGATCCTCATAAGGAAGAGTTTCTCCCGCGAA GTGGGCGATGAATATTCAGGCGACGATAGCTATGGCATGTTTAATGAGAGCTGGCAGGTCAACGTTCTTGAGGGT GTGGCTTTGATGAAATTGCTCCTCGAAGATCCGGAAAAGGAAAGTGCCACATGGAATTACGAAGAGCACATAAAC ATGGCGATCAATCAAGAAGTCTCGTCGATGCGCATGCATTACTGCACTGGTCTATCCTCTGAGGGTCCGAGATTC GTCATGAGCCAATTGGGCTATATACTTGAAAAGCTTCTACCGGCCTATGCTAAAGCTTCAGCCACAACAATCAAC AACGCTGGTCGCCCTCATTACCTACTTTTAAGGAATAAACGCCATGAGCTCTTGGAATGGGTTGCCAATTTCGGT TCAACCACGATCGAGTTTTGGAACAATTGGGTTGTAGACCCAATTCACAGGCTTATCGGAACTATAAGGCATGAT GAAAAGAGTGAAATTGCACTGATGAGTAGAAACAGCTTGGAAGCCGATCGAGCGAGTCTGGAAAGGATGGTTGTG GACTTCATTCTTGATCGTTGTGAACCGAACAAAAATGATTATGATGCCTTTGATACTCATGTCATCACGGCTAAA GTTCGGGAAGGTGACTTGACACCAGTGCTGAAAGCATACGAAAATGACCTACGTAGTCCCTTTGTTGGGACCATT AAGGGTGATTTGGTGCGAGCACTTCTAATACAGATACAGAAGACAAAAGTAGATGTTGAGATTGCGATAGGGGGA ATTGACGCTCTGTTGAAAAGCCAAGAGCTGGTTTTCGGGTTTATTGGACTAACCCCAGGCATAATGGTGTCATAT GCGACTCTTCGTTGGCTTTACAGCTTGCTTGGCAGTCGAAGGGGCTTGCGAACGGGTAAGCAGCAGGACCAATTG AGGCATGCTTTGCGGGTTGTCCATCGGACTTTAACATCATCTGTCCCCACTCCTGGCGATACCCTCGCGTTTAGA GACTATGGTCTCCTCATATGCAATGCTGAAGTCCTACTTTCAAAGGCGCGGACCATACTGAAAGGCGCAGATCTC CGCTCATTTCAGGAAGACATTAATGAATTAGTCGAGCGAGATACAATTGACCGGCAACTCAAGGTTGTTGAAAGA ATGGGTTGGGTATACTCAAGATGGATCTGA |
Gene | >Ani_SJS100_1|g2398.t1 ATGTATGCGATCAACAAGTAAGCAACGCAGTTATATTGCTAGCATAGGGAGTATTTGACATTCTCACAGCAGAGC GTACGGTCTGGATACACATTTTGATAAATTGTGGCGGCGAATAAACGATGATGCCCATCCGAAATCGCTAGAGTT CTACGAACATGCAAGTCAAGCGAACTACCCCATTGAGAATGTCGCAAAACTGGAGAAGTTTATGGACTCACTTTC CATGACATCCAAGTCTCAACCATTATTGCAGACGGAGAGGCTTTTAAAAATAATTGCCGAATACCCTGAGGATGT GGTCAATGGCGATTACACGTCCTCAGACGTGAAAGTATTCATGACACACGTCGTAGACACTTCTTGGCTCGTAGC TGCCAAGGCTGCAGTGCAGACTCTCGGGATTATACTGAATACACTATCGGATGATGTACTCTCCCTCAACGACGA GATGCTCTATTGGGACAGCGTTTTGGAATCCCCCTGGTCACTAGGGCTTTATATGATCCAGAATTCACCAGTGGT GCTTTGGAGCCGATTTCGAAAAGCCTGGCGCCATGCTAACTCTACGAACAACCGCCGGACGCCCGGCCAAACCGG TTGGATGAAATTCTACGAATCTGTTCGTCAGTGCATCCTTCCACAAAGGTTGCATTTTTGGCGGGGAAGGATGTT ATCACCGCTCTCAACAGCGAAGTCAGATGTACGACAGAAGCGGAAGACCCTGAGCTCATTGAAGGATATGAACGC TAGTAGCATCGGGATCCTCATAAGGAAGAGTTTCTCCCGCGAAGTGGGCGATGAATATTCAGGCGACGATAGCTA TGGCATGTTTAATGAGAGCTGGCAGGTCAACGTTCTTGAGGGTGTGGCTTTGATGAAATTGCTCCTCGAAGATCC GGAAAAGGAAAGTGCCACATGGAATTACGAAGAGCACATAAACATGGCGATCAATCAAGAAGTCTCGTCGATGCG CATGCATTACTGCACTGGTCTATCCTCTGAGGGTCCGAGATTCGTCATGAGCCAATTGGGCTATATACTTGAAAA GCTTCTACCGGCCTATGCTAAAGCTTCAGCCACAACAATCAACAACGCTGGTCGCCCTCATTACCTAGTACGTTT TTGGTTACCCTTAACCCTTGCACTATTTTCAACAAGTACATCACTGGAGCTTTTAAGGAATAAACGCCATGAGCT CTTGGAATGGGTTGCCAATTTCGGTTCAACCACGATCGAGTTTTGGAACAATTGGGTTGTAGACCCAATTCACAG GCTTATCGGAACTATAAGGCATGATGAAAAGAGTGAAATTGCACTGATGAGTAGAAACAGCTTGGAAGCCGATCG AGCGAGTCTGGAAAGGATGGTTGTGGACTTCATTCTTGATCGTTGTGAACCGAACAAAAATGATTATGATGCCTT TGATACTCATGTCATCACGGCTAAAGTTCGGGAAGGTGACTTGACACCAGTGCTGAAAGCATACGAAAATGACCT ACGTAGTCCCTTTGTTGGGACCATTAAGGGTGATTTGGTGCGAGCACTTCTAATACAGATACAGAAGACAAAAGT AGATGTTGAGATTGCGATAGGGGGAATTGACGCTCTGTTGAAAAGCCAAGAGCTGGTTTTCGGGTAAGAATTCTG GCCAGGAATACCAGGGTAGGCATTGACTTTTCACAGGTTTATTGGACTAACCCCAGGCATAATGGTGTCATATGC GACTCTTCGTTGGCTTTACAGCTTGCTTGGCAGTCGAAGGGGCTTGCGAACGGGTAAGCAGCAGGACCAATTGAG GCATGCTTTGCGGTAAGTTTTGGCCTAGCTTAAAGGAACAATTCAATCCAGGCCTAATTATTGCTGTAGGGTTGT CCATCGGACTTTAACATCATCTGTCCCCACTCCTGGCGATACCCTCGCGTTTAGAGACTATGGTCTCCTCATATG CAATGCTGAAGTCCTACTTTCAAAGGCGCGGACCATACTGAAAGGCGCAGATCTCCGCTCATTTCAGGAAGACAT TAATGAATTAGTCGAGCGAGATACAATTGACCGGCAACTCAAGGTTGTTGAAAGAATGGGTTGGGTATACTCAAG ATGGATCTGA |