© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2396.t1 |
| Gene name | |
| Location | scaffold_009:605807..608193 |
| Strand | - |
| Gene length (bp) | 2386 |
| Transcript length (bp) | 2331 |
| Coding sequence length (bp) | 2331 |
| Protein length (aa) | 777 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08608 | Wyosine_form | Wyosine base formation | 8.7E-24 | 629 | 697 |
| PF04055 | Radical_SAM | Radical SAM superfamily | 7.7E-21 | 445 | 618 |
| PF00258 | Flavodoxin_1 | Flavodoxin | 3.0E-07 | 124 | 292 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051536 | iron-sulfur cluster binding | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0010181 | FMN binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0043168 | anion binding | No |
| GO:0051540 | metal cluster binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2396.t1 MEGSGNEGLLAFWHSYRLPVLLALATLLVLVRAYRKLQPKSKIATASSIPSSPRSHSPEKLEKTISNSTEKDVGT DSKPSVVEKDASQKQAGPKRVTGKKPLKVAGRRRGSDQEPAVSFIQPIIFFASLTANTERYAQVLLEELRAAARD RADPDNRERGLLPPQIHDLSYVDFDDYFISAPKPPSTSPGTRYVYCMLIPTYNIDTILNTFLGHLDETHHDFRID TAPLSGLAGYSVFGFGDKEGWPTEEEGFCSQAKELDRWMAKLTGRKRAYPLGFGDVKSDAESALKEWSRGLQDIL GEIVENGGLGEGVPGSGDPLESDEEDLDDEGSESDKANGRKRNKNQSVVDLEDIKFSSDAASGSPIPVDFTTGGK SPAPATEKEMVPKTSPTYASLTKQGYTIVGSHSGVKICRWTKSALRGRGSCYKFSFYGIRSHLCMEATPSLSCSN KCIFCWRHGTNPVGTTWRWKVDDPELIFNGVKEGHYKKIKMMRGVPGVRAERFAEAMRIRHCALSLVGEPIFYPH INRFLDMLHSEHISSFLVCNAQHPDQLETLHRVTQLYVSIDASNRESLRKIDRPLHRDFWERFQRCLDILREKRH YQRTVFRLTLVKGFNIDDEVIGYANLVEKALPCFVEIKGVTYCGTSTSAGAGLTMQNVPFYEEVQQFVTSLNAEL ERRGLKYGIAAEHAHSCCALIASERFHVNGKWHSRIDYDRFFQLLEKEKADGTSFTPEDYMRETEDWALWGNGGF DPNDERVYKKGKKKAIQAAAATEAQG* |
| Coding | >Ani_SJS100_1|g2396.t1 ATGGAGGGATCTGGAAACGAAGGTCTTTTGGCCTTCTGGCATTCCTACCGCTTGCCTGTCCTCCTCGCTCTCGCT ACCCTTCTCGTTCTCGTTCGCGCCTATCGTAAACTGCAGCCCAAGTCCAAGATTGCTACTGCCTCCTCTATCCCG TCGTCGCCTCGCAGCCATTCCCCGGAGAAACTTGAAAAGACCATCAGCAACTCTACGGAGAAGGATGTCGGAACC GACTCAAAGCCCTCGGTCGTGGAGAAGGACGCGTCGCAAAAGCAGGCCGGTCCGAAGCGGGTCACAGGAAAGAAG CCGCTAAAGGTTGCTGGCCGACGCAGAGGTTCTGACCAGGAACCGGCTGTCTCCTTCATCCAACCCATTATCTTC TTCGCTTCGTTGACCGCAAACACCGAGAGATATGCCCAAGTGTTGCTGGAAGAATTGCGTGCTGCTGCGCGCGAT CGGGCCGATCCTGACAATCGGGAACGAGGCCTCCTTCCCCCTCAAATTCATGACCTGTCGTATGTCGATTTTGAC GACTACTTCATCAGCGCCCCGAAGCCCCCATCGACCTCGCCAGGAACACGCTATGTCTATTGCATGCTGATCCCG ACTTACAACATCGATACGATCTTGAACACCTTCCTTGGTCACCTTGATGAAACTCATCATGACTTCCGCATTGAT ACTGCGCCCCTGTCCGGTCTCGCTGGCTATTCTGTCTTCGGATTTGGCGACAAGGAAGGGTGGCCTACTGAAGAG GAAGGCTTCTGCTCACAGGCGAAGGAACTGGACCGCTGGATGGCGAAACTTACAGGCAGGAAGAGGGCCTACCCT CTTGGGTTTGGTGATGTAAAGAGCGATGCGGAATCGGCCTTGAAGGAGTGGTCCCGTGGCCTACAGGATATTCTC GGTGAAATCGTCGAAAATGGCGGCCTAGGTGAAGGTGTTCCTGGTAGCGGTGATCCGCTCGAAAGTGATGAGGAG GATTTGGACGACGAAGGTTCGGAGTCCGACAAAGCAAACGGTCGGAAGCGGAACAAGAATCAATCGGTGGTCGAC CTGGAAGATATCAAATTCAGCTCGGATGCTGCATCCGGATCCCCTATCCCCGTGGACTTCACTACGGGCGGAAAG TCTCCTGCGCCCGCTACTGAAAAAGAGATGGTGCCCAAGACCTCGCCGACCTATGCCTCTCTGACGAAGCAAGGA TATACGATTGTTGGTTCGCACTCTGGCGTCAAGATCTGTCGTTGGACCAAGTCTGCCCTGCGTGGTCGTGGCTCC TGTTATAAGTTTTCGTTCTACGGTATTCGCTCTCACCTGTGCATGGAGGCAACTCCTTCGCTTTCTTGCAGCAAT AAATGTATCTTCTGCTGGCGTCACGGTACTAACCCTGTCGGCACCACTTGGCGCTGGAAGGTGGACGATCCGGAA CTCATCTTCAATGGAGTTAAGGAGGGTCATTACAAGAAGATCAAGATGATGCGTGGTGTTCCGGGTGTGCGTGCG GAGCGATTCGCCGAAGCTATGCGGATCCGTCACTGTGCTCTCAGTTTGGTCGGCGAGCCGATCTTCTATCCCCAT ATCAATCGTTTCCTGGACATGTTGCACAGCGAACACATCTCCAGTTTCCTTGTCTGCAATGCCCAACACCCTGAC CAGCTTGAAACGTTGCATCGGGTGACGCAACTCTATGTCTCCATCGATGCGAGTAACCGCGAGAGCCTACGCAAG ATCGATCGACCTCTGCACCGCGATTTCTGGGAGCGCTTCCAGCGCTGCTTGGATATCCTCCGGGAAAAGCGCCAT TACCAGCGGACGGTGTTCCGTCTTACGCTGGTCAAGGGTTTCAACATTGACGATGAGGTGATTGGATATGCCAAC CTGGTCGAAAAGGCCCTGCCTTGCTTTGTTGAAATCAAGGGCGTGACATACTGTGGTACTAGCACCAGCGCCGGA GCTGGACTGACCATGCAGAACGTTCCTTTCTATGAGGAGGTTCAGCAGTTTGTCACCTCTCTCAACGCAGAGCTG GAGCGCCGTGGTCTGAAGTATGGTATCGCCGCTGAACACGCTCACAGTTGTTGCGCGCTGATCGCGTCCGAGCGG TTCCACGTCAATGGCAAATGGCATTCTCGGATCGATTACGATAGGTTCTTCCAGCTCTTGGAGAAGGAGAAGGCC GACGGTACCTCGTTCACGCCGGAGGATTACATGAGGGAAACCGAGGACTGGGCGCTGTGGGGTAACGGAGGTTTC GATCCGAACGATGAGCGTGTCTACAAGAAGGGCAAGAAGAAGGCCATTCAGGCTGCTGCTGCTACTGAAGCTCAG GGATGA |
| Transcript | >Ani_SJS100_1|g2396.t1 ATGGAGGGATCTGGAAACGAAGGTCTTTTGGCCTTCTGGCATTCCTACCGCTTGCCTGTCCTCCTCGCTCTCGCT ACCCTTCTCGTTCTCGTTCGCGCCTATCGTAAACTGCAGCCCAAGTCCAAGATTGCTACTGCCTCCTCTATCCCG TCGTCGCCTCGCAGCCATTCCCCGGAGAAACTTGAAAAGACCATCAGCAACTCTACGGAGAAGGATGTCGGAACC GACTCAAAGCCCTCGGTCGTGGAGAAGGACGCGTCGCAAAAGCAGGCCGGTCCGAAGCGGGTCACAGGAAAGAAG CCGCTAAAGGTTGCTGGCCGACGCAGAGGTTCTGACCAGGAACCGGCTGTCTCCTTCATCCAACCCATTATCTTC TTCGCTTCGTTGACCGCAAACACCGAGAGATATGCCCAAGTGTTGCTGGAAGAATTGCGTGCTGCTGCGCGCGAT CGGGCCGATCCTGACAATCGGGAACGAGGCCTCCTTCCCCCTCAAATTCATGACCTGTCGTATGTCGATTTTGAC GACTACTTCATCAGCGCCCCGAAGCCCCCATCGACCTCGCCAGGAACACGCTATGTCTATTGCATGCTGATCCCG ACTTACAACATCGATACGATCTTGAACACCTTCCTTGGTCACCTTGATGAAACTCATCATGACTTCCGCATTGAT ACTGCGCCCCTGTCCGGTCTCGCTGGCTATTCTGTCTTCGGATTTGGCGACAAGGAAGGGTGGCCTACTGAAGAG GAAGGCTTCTGCTCACAGGCGAAGGAACTGGACCGCTGGATGGCGAAACTTACAGGCAGGAAGAGGGCCTACCCT CTTGGGTTTGGTGATGTAAAGAGCGATGCGGAATCGGCCTTGAAGGAGTGGTCCCGTGGCCTACAGGATATTCTC GGTGAAATCGTCGAAAATGGCGGCCTAGGTGAAGGTGTTCCTGGTAGCGGTGATCCGCTCGAAAGTGATGAGGAG GATTTGGACGACGAAGGTTCGGAGTCCGACAAAGCAAACGGTCGGAAGCGGAACAAGAATCAATCGGTGGTCGAC CTGGAAGATATCAAATTCAGCTCGGATGCTGCATCCGGATCCCCTATCCCCGTGGACTTCACTACGGGCGGAAAG TCTCCTGCGCCCGCTACTGAAAAAGAGATGGTGCCCAAGACCTCGCCGACCTATGCCTCTCTGACGAAGCAAGGA TATACGATTGTTGGTTCGCACTCTGGCGTCAAGATCTGTCGTTGGACCAAGTCTGCCCTGCGTGGTCGTGGCTCC TGTTATAAGTTTTCGTTCTACGGTATTCGCTCTCACCTGTGCATGGAGGCAACTCCTTCGCTTTCTTGCAGCAAT AAATGTATCTTCTGCTGGCGTCACGGTACTAACCCTGTCGGCACCACTTGGCGCTGGAAGGTGGACGATCCGGAA CTCATCTTCAATGGAGTTAAGGAGGGTCATTACAAGAAGATCAAGATGATGCGTGGTGTTCCGGGTGTGCGTGCG GAGCGATTCGCCGAAGCTATGCGGATCCGTCACTGTGCTCTCAGTTTGGTCGGCGAGCCGATCTTCTATCCCCAT ATCAATCGTTTCCTGGACATGTTGCACAGCGAACACATCTCCAGTTTCCTTGTCTGCAATGCCCAACACCCTGAC CAGCTTGAAACGTTGCATCGGGTGACGCAACTCTATGTCTCCATCGATGCGAGTAACCGCGAGAGCCTACGCAAG ATCGATCGACCTCTGCACCGCGATTTCTGGGAGCGCTTCCAGCGCTGCTTGGATATCCTCCGGGAAAAGCGCCAT TACCAGCGGACGGTGTTCCGTCTTACGCTGGTCAAGGGTTTCAACATTGACGATGAGGTGATTGGATATGCCAAC CTGGTCGAAAAGGCCCTGCCTTGCTTTGTTGAAATCAAGGGCGTGACATACTGTGGTACTAGCACCAGCGCCGGA GCTGGACTGACCATGCAGAACGTTCCTTTCTATGAGGAGGTTCAGCAGTTTGTCACCTCTCTCAACGCAGAGCTG GAGCGCCGTGGTCTGAAGTATGGTATCGCCGCTGAACACGCTCACAGTTGTTGCGCGCTGATCGCGTCCGAGCGG TTCCACGTCAATGGCAAATGGCATTCTCGGATCGATTACGATAGGTTCTTCCAGCTCTTGGAGAAGGAGAAGGCC GACGGTACCTCGTTCACGCCGGAGGATTACATGAGGGAAACCGAGGACTGGGCGCTGTGGGGTAACGGAGGTTTC GATCCGAACGATGAGCGTGTCTACAAGAAGGGCAAGAAGAAGGCCATTCAGGCTGCTGCTGCTACTGAAGCTCAG GGATGA |
| Gene | >Ani_SJS100_1|g2396.t1 ATGGAGGGATCTGGAAACGAAGGTAAATATGCTTTCCCTCTGCGCTCGTGCAAGTACTAATGGTTCATTCTGCTT AGGTCTTTTGGCCTTCTGGCATTCCTACCGCTTGCCTGTCCTCCTCGCTCTCGCTACCCTTCTCGTTCTCGTTCG CGCCTATCGTAAACTGCAGCCCAAGTCCAAGATTGCTACTGCCTCCTCTATCCCGTCGTCGCCTCGCAGCCATTC CCCGGAGAAACTTGAAAAGACCATCAGCAACTCTACGGAGAAGGATGTCGGAACCGACTCAAAGCCCTCGGTCGT GGAGAAGGACGCGTCGCAAAAGCAGGCCGGTCCGAAGCGGGTCACAGGAAAGAAGCCGCTAAAGGTTGCTGGCCG ACGCAGAGGTTCTGACCAGGAACCGGCTGTCTCCTTCATCCAACCCATTATCTTCTTCGCTTCGTTGACCGCAAA CACCGAGAGATATGCCCAAGTGTTGCTGGAAGAATTGCGTGCTGCTGCGCGCGATCGGGCCGATCCTGACAATCG GGAACGAGGCCTCCTTCCCCCTCAAATTCATGACCTGTCGTATGTCGATTTTGACGACTACTTCATCAGCGCCCC GAAGCCCCCATCGACCTCGCCAGGAACACGCTATGTCTATTGCATGCTGATCCCGACTTACAACATCGATACGAT CTTGAACACCTTCCTTGGTCACCTTGATGAAACTCATCATGACTTCCGCATTGATACTGCGCCCCTGTCCGGTCT CGCTGGCTATTCTGTCTTCGGATTTGGCGACAAGGAAGGGTGGCCTACTGAAGAGGAAGGCTTCTGCTCACAGGC GAAGGAACTGGACCGCTGGATGGCGAAACTTACAGGCAGGAAGAGGGCCTACCCTCTTGGGTTTGGTGATGTAAA GAGCGATGCGGAATCGGCCTTGAAGGAGTGGTCCCGTGGCCTACAGGATATTCTCGGTGAAATCGTCGAAAATGG CGGCCTAGGTGAAGGTGTTCCTGGTAGCGGTGATCCGCTCGAAAGTGATGAGGAGGATTTGGACGACGAAGGTTC GGAGTCCGACAAAGCAAACGGTCGGAAGCGGAACAAGAATCAATCGGTGGTCGACCTGGAAGATATCAAATTCAG CTCGGATGCTGCATCCGGATCCCCTATCCCCGTGGACTTCACTACGGGCGGAAAGTCTCCTGCGCCCGCTACTGA AAAAGAGATGGTGCCCAAGACCTCGCCGACCTATGCCTCTCTGACGAAGCAAGGATATACGATTGTTGGTTCGCA CTCTGGCGTCAAGATCTGTCGTTGGACCAAGTCTGCCCTGCGTGGTCGTGGCTCCTGTTATAAGTTTTCGTTCTA CGGTATTCGCTCTCACCTGTGCATGGAGGCAACTCCTTCGCTTTCTTGCAGCAATAAATGTATCTTCTGCTGGCG TCACGGTACTAACCCTGTCGGCACCACTTGGCGCTGGAAGGTGGACGATCCGGAACTCATCTTCAATGGAGTTAA GGAGGGTCATTACAAGAAGATCAAGATGATGCGTGGTGTTCCGGGTGTGCGTGCGGAGCGATTCGCCGAAGCTAT GCGGATCCGTCACTGTGCTCTCAGTTTGGTCGGCGAGCCGATCTTCTATCCCCATATCAATCGTTTCCTGGACAT GTTGCACAGCGAACACATCTCCAGTTTCCTTGTCTGCAATGCCCAACACCCTGACCAGCTTGAAACGTTGCATCG GGTGACGCAACTCTATGTCTCCATCGATGCGAGTAACCGCGAGAGCCTACGCAAGATCGATCGACCTCTGCACCG CGATTTCTGGGAGCGCTTCCAGCGCTGCTTGGATATCCTCCGGGAAAAGCGCCATTACCAGCGGACGGTGTTCCG TCTTACGCTGGTCAAGGGTTTCAACATTGACGATGAGGTGATTGGATATGCCAACCTGGTCGAAAAGGCCCTGCC TTGCTTTGTTGAAATCAAGGGCGTGACATACTGTGGTACTAGCACCAGCGCCGGAGCTGGACTGACCATGCAGAA CGTTCCTTTCTATGAGGAGGTTCAGCAGTTTGTCACCTCTCTCAACGCAGAGCTGGAGCGCCGTGGTCTGAAGTA TGGTATCGCCGCTGAACACGCTCACAGTTGTTGCGCGCTGATCGCGTCCGAGCGGTTCCACGTCAATGGCAAATG GCATTCTCGGATCGATTACGATAGGTTCTTCCAGCTCTTGGAGAAGGAGAAGGCCGACGGTACCTCGTTCACGCC GGAGGATTACATGAGGGAAACCGAGGACTGGGCGCTGTGGGGTAACGGAGGTTTCGATCCGAACGATGAGCGTGT CTACAAGAAGGGCAAGAAGAAGGCCATTCAGGCTGCTGCTGCTACTGAAGCTCAGGGATGA |