© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2395.t1 |
| Gene name | |
| Location | scaffold_009:598477..599956 |
| Strand | - |
| Gene length (bp) | 1479 |
| Transcript length (bp) | 1233 |
| Coding sequence length (bp) | 1233 |
| Protein length (aa) | 411 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 31 | 19 |
| 2 | 44 | 66 | 22 |
| 3 | 86 | 108 | 22 |
| 4 | 120 | 142 | 22 |
| 5 | 174 | 196 | 22 |
| 6 | 208 | 230 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2395.t1 MAKDDRSLEVKAVAAAFMSVACVTVILRCYVRGWIVRAFGWDDWAMVVAMGFYAMFSGCMIGGSLYGTGRRFKDL DAHQRVTAMEYWWFCEIAYCFAAVACKISVCIFLMRITVRRLHIWILWTVMVLTVVAGMVFMFIMLLQCKPLAYF WTRKAFNPDIHGHCMDIQIVIAMTYVYSGFAALCDFTVGILPIFLVRKLHMKHKTKMAVVGILSMACIASSATII RIPWVHTFADWDFLYATVEIALWSNIECGLGITAGSLATLRPLLRKWLGSSADHNYDASPFPGPSGSRPLGKSGG MGRSHDRPYPLGSLDEAAVQNRLRPDKLAVTVTTIQSQVDPDTRLWRGGSSNSSEERLTGSSGNAERTHGTIPEG TDLELGMGLGIHRTFEVTQTSSGGTSRTVGVREHV* |
| Coding | >Ani_SJS100_1|g2395.t1 ATGGCTAAGGATGACCGCAGCCTCGAGGTCAAGGCGGTTGCGGCCGCCTTTATGTCGGTTGCGTGTGTGACTGTG ATACTACGATGCTATGTGCGTGGATGGATCGTGCGAGCATTCGGCTGGGATGACTGGGCCATGGTGGTGGCCATG GGCTTCTACGCCATGTTCTCCGGGTGCATGATTGGAGGCAGTCTTTACGGTACTGGACGACGTTTCAAAGACTTG GATGCGCATCAGCGTGTAACCGCCATGGAGTACTGGTGGTTTTGTGAGATCGCATATTGTTTTGCAGCCGTTGCC TGTAAAATCTCCGTCTGCATTTTCTTGATGCGCATTACTGTTCGACGCCTCCACATCTGGATCCTCTGGACCGTC ATGGTTTTGACCGTCGTTGCTGGCATGGTCTTCATGTTCATCATGTTGCTACAGTGCAAGCCACTCGCCTACTTC TGGACTCGCAAGGCCTTTAACCCGGACATTCACGGCCACTGCATGGACATTCAAATCGTCATCGCCATGACCTAC GTGTACAGTGGGTTCGCGGCGTTGTGTGATTTCACCGTCGGCATTCTGCCTATCTTCCTTGTACGCAAGTTGCAT ATGAAGCATAAAACGAAAATGGCTGTGGTGGGAATTCTGAGTATGGCATGCATCGCCTCCTCTGCTACCATCATC CGTATCCCCTGGGTACATACCTTCGCGGATTGGGACTTCCTCTACGCAACCGTTGAAATCGCCCTCTGGTCCAAC ATCGAATGCGGCCTCGGTATCACCGCCGGCAGTCTCGCCACCCTCCGTCCCCTTCTCCGCAAATGGCTCGGCTCC AGCGCCGACCACAACTACGACGCATCCCCCTTTCCCGGTCCCTCCGGCTCCCGACCGCTCGGCAAGAGCGGTGGC ATGGGACGCAGTCACGACCGACCGTACCCGCTAGGCTCGCTCGACGAAGCCGCCGTGCAGAACCGTCTCCGGCCG GACAAACTGGCCGTGACCGTGACGACGATCCAGAGCCAGGTGGACCCCGATACGCGACTCTGGCGCGGCGGGTCA TCGAACAGCAGCGAGGAACGGCTGACGGGGTCCTCGGGGAACGCAGAGCGGACGCATGGAACTATCCCCGAGGGG ACTGATTTGGAATTAGGCATGGGTCTGGGTATCCATCGGACGTTTGAAGTGACGCAGACTTCCTCGGGAGGAACG TCACGTACTGTAGGAGTGAGGGAGCATGTCTGA |
| Transcript | >Ani_SJS100_1|g2395.t1 ATGGCTAAGGATGACCGCAGCCTCGAGGTCAAGGCGGTTGCGGCCGCCTTTATGTCGGTTGCGTGTGTGACTGTG ATACTACGATGCTATGTGCGTGGATGGATCGTGCGAGCATTCGGCTGGGATGACTGGGCCATGGTGGTGGCCATG GGCTTCTACGCCATGTTCTCCGGGTGCATGATTGGAGGCAGTCTTTACGGTACTGGACGACGTTTCAAAGACTTG GATGCGCATCAGCGTGTAACCGCCATGGAGTACTGGTGGTTTTGTGAGATCGCATATTGTTTTGCAGCCGTTGCC TGTAAAATCTCCGTCTGCATTTTCTTGATGCGCATTACTGTTCGACGCCTCCACATCTGGATCCTCTGGACCGTC ATGGTTTTGACCGTCGTTGCTGGCATGGTCTTCATGTTCATCATGTTGCTACAGTGCAAGCCACTCGCCTACTTC TGGACTCGCAAGGCCTTTAACCCGGACATTCACGGCCACTGCATGGACATTCAAATCGTCATCGCCATGACCTAC GTGTACAGTGGGTTCGCGGCGTTGTGTGATTTCACCGTCGGCATTCTGCCTATCTTCCTTGTACGCAAGTTGCAT ATGAAGCATAAAACGAAAATGGCTGTGGTGGGAATTCTGAGTATGGCATGCATCGCCTCCTCTGCTACCATCATC CGTATCCCCTGGGTACATACCTTCGCGGATTGGGACTTCCTCTACGCAACCGTTGAAATCGCCCTCTGGTCCAAC ATCGAATGCGGCCTCGGTATCACCGCCGGCAGTCTCGCCACCCTCCGTCCCCTTCTCCGCAAATGGCTCGGCTCC AGCGCCGACCACAACTACGACGCATCCCCCTTTCCCGGTCCCTCCGGCTCCCGACCGCTCGGCAAGAGCGGTGGC ATGGGACGCAGTCACGACCGACCGTACCCGCTAGGCTCGCTCGACGAAGCCGCCGTGCAGAACCGTCTCCGGCCG GACAAACTGGCCGTGACCGTGACGACGATCCAGAGCCAGGTGGACCCCGATACGCGACTCTGGCGCGGCGGGTCA TCGAACAGCAGCGAGGAACGGCTGACGGGGTCCTCGGGGAACGCAGAGCGGACGCATGGAACTATCCCCGAGGGG ACTGATTTGGAATTAGGCATGGGTCTGGGTATCCATCGGACGTTTGAAGTGACGCAGACTTCCTCGGGAGGAACG TCACGTACTGTAGGAGTGAGGGAGCATGTCTGA |
| Gene | >Ani_SJS100_1|g2395.t1 ATGGCTAAGGATGACCGCAGCCTCGAGGTCAAGGCGGTTGCGGCCGCCTTTATGTCGGTTGCGTGTGTGACTGTG ATACTACGATGCTATGTGCGTGGATGGATCGTGCGAGCATTCGGCTGGGATGACTGGGCCATGGTGGTGGCCATG GTACGTCTCATCCCTGTATTGACATTCTTTCAACACATGGTGTTCTAATCAGCAGCATGTCTAGGGCTTCTACGC CATGTTCTCCGGGTGCATGATTGGAGGCAGTCTTTACGGTACTGGACGACGTTTCAAAGACTTGGATGCGCATCA GCGTGTAACCGCCATGGAGGTCGGTAACTCCTATTCCTCTTAATTCCACTACATTCAACCTAACATGGGCCGAAT ATAGTACTGGTGGTTTTGTGAGATCGCATATTGTTTTGCAGCCGTTGCCTGTAAAATCTCCGTCTGCATTTTCTT GATGCGCATTACTGTTCGACGCCTCCACATCTGGATCCTCTGGACCGTCATGGTTTTGACCGTCGTTGCTGGCAT GGTCTTCATGTTCATCATGTTGCTACAGTGCAAGCCACTCGCCTACTTCTGGACTCGCAAGGCCTTTAACCCGGA CATTCACGGCCACTGCATGGACATTCAAATCGTCATCGCCATGACCTACGTGTACAGTGGGTTCGCGGCGTTGTG TGATTTCACCGTCGGCATTCTGCCTATCTTCCTTGTACGCAAGTTGCATATGAAGCATAAAACGAAAATGGCTGT GGTGGGAATTCTGAGTATGGCATGCATGTATGTTCCCCTCGCTGCATAGCCGATGAAATGAAACTAACGAACCTC CAACAGCGCCTCCTCTGCTACCATCATCCGTATCCCCTGGGTACATACCTTCGCGGATTGGGACTTCCTCTGTAC GCCTGCCCCAACCTCTCCCCCAAAACACACCCCCACACAAGCCCTCTTACTAACCTCAACCCAGACGCAACCGTT GAAATCGCCCTCTGGTCCAACATCGAATGCGGCCTCGGTATCACCGCCGGCAGTCTCGCCACCCTCCGTCCCCTT CTCCGCAAATGGCTCGGCTCCAGCGCCGACCACAACTACGACGCATCCCCCTTTCCCGGTCCCTCCGGCTCCCGA CCGCTCGGCAAGAGCGGTGGCATGGGACGCAGTCACGACCGACCGTACCCGCTAGGCTCGCTCGACGAAGCCGCC GTGCAGAACCGTCTCCGGCCGGACAAACTGGCCGTGACCGTGACGACGATCCAGAGCCAGGTGGACCCCGATACG CGACTCTGGCGCGGCGGGTCATCGAACAGCAGCGAGGAACGGCTGACGGGGTCCTCGGGGAACGCAGAGCGGACG CATGGAACTATCCCCGAGGGGACTGATTTGGAATTAGGCATGGGTCTGGGTATCCATCGGACGTTTGAAGTGACG CAGACTTCCTCGGGAGGAACGTCACGTACTGTAGGAGTGAGGGAGCATGTCTGA |