© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g2393.t1 |
| Gene name | |
| Location | scaffold_009:593489..594953 |
| Strand | + |
| Gene length (bp) | 1464 |
| Transcript length (bp) | 1233 |
| Coding sequence length (bp) | 1233 |
| Protein length (aa) | 411 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00150 | Cellulase | Cellulase (glycosyl hydrolase family 5) | 5.1E-56 | 35 | 299 |
| PF00734 | CBM_1 | Fungal cellulose binding domain | 7.3E-12 | 379 | 406 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005576 | extracellular region | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0030248 | cellulose binding | Yes |
| GO:0071704 | organic substance metabolic process | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0005488 | binding | No |
| GO:0030246 | carbohydrate binding | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0030247 | polysaccharide binding | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2393.t1 MKTLSLAAVLLVQAWTANSSPRAKRSSGFQWFGSNESGAEFGSGNIPGTLGTDYIWPDATAIATLHSAGMNIFRV PFLMERLVPDELTGAADATYMADLKATVQTITDLGAYAVVDPHNFGRYYGNIITSTSDFAAFWTTVASEFTDNDL VIFDTNNEFHDEDQTLVLDLNQAAITAIRATGATTQYIFVEGNSYTGAWTWTTTNTNLVNLTDPNDHLIYEMHQY LDSDGSGTSSTCVSSTIGAERIADATTWLKENGKQAVLGEFAGGANSVCEEAVTGMLDAMVDASDVWLGGMWWSA GPWWGDYIFSLEPDDGIAYEYYLGVLEGYTPGSSSGSSGGSTTSAVASASSTSSAGSTTSKVTTTTAATATSTAV AAHYAQCGGEGWTGATTCADGYTCTVENEWYSQCL* |
| Coding | >Ani_SJS100_1|g2393.t1 ATGAAGACTCTCTCCCTTGCAGCTGTCTTGCTCGTCCAAGCCTGGACTGCGAACAGCAGCCCGAGGGCTAAGCGG TCGTCTGGCTTCCAATGGTTCGGCAGCAACGAATCCGGCGCCGAATTTGGCTCCGGGAATATCCCCGGCACTTTG GGCACGGATTACATCTGGCCTGATGCGACGGCTATTGCGACGCTGCATAGTGCCGGGATGAATATCTTTCGTGTG CCGTTCCTGATGGAGCGGTTGGTGCCGGATGAGTTGACTGGTGCCGCGGATGCGACGTATATGGCTGATCTGAAG GCTACGGTGCAAACCATCACAGACCTTGGTGCTTATGCGGTGGTGGATCCGCATAATTTTGGGAGATACTACGGC AACATCATCACCTCAACCAGCGACTTTGCGGCCTTCTGGACAACAGTAGCCAGCGAGTTCACCGACAATGACCTT GTCATCTTCGATACCAACAACGAATTCCACGACGAAGACCAAACCCTCGTGCTCGATCTCAATCAAGCCGCCATC ACCGCCATCCGCGCCACCGGTGCCACAACGCAATATATCTTCGTCGAAGGCAATTCCTACACCGGCGCCTGGACC TGGACCACCACCAACACGAACCTCGTCAACCTGACCGACCCCAACGACCATCTCATCTACGAAATGCACCAGTAC CTGGACAGCGATGGCTCCGGGACGAGTTCGACGTGCGTCAGCTCGACAATTGGTGCGGAGCGCATTGCTGATGCC ACAACCTGGTTGAAAGAGAATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTGTATGTGAG GAGGCGGTTACAGGCATGTTGGATGCGATGGTGGATGCTAGTGATGTTTGGCTGGGGGGCATGTGGTGGTCTGCT GGGCCTTGGTGGGGGGATTATATCTTCTCGTTGGAGCCCGATGATGGAATTGCTTATGAGTATTATTTGGGGGTG TTGGAGGGGTATACGCCTGGTTCATCTTCGGGATCATCTGGAGGGAGTACAACAAGTGCCGTGGCGAGTGCTAGT AGTACGTCGTCTGCTGGGAGTACTACGAGCAAAGTGACTACTACTACTGCTGCGACTGCTACATCGACGGCTGTA GCTGCGCACTATGCTCAGTGTGGTGGGGAGGGCTGGACTGGGGCGACGACTTGTGCGGATGGATATACCTGCACA GTAGAAAATGAGTGGTATTCGCAGTGTTTGTAG |
| Transcript | >Ani_SJS100_1|g2393.t1 ATGAAGACTCTCTCCCTTGCAGCTGTCTTGCTCGTCCAAGCCTGGACTGCGAACAGCAGCCCGAGGGCTAAGCGG TCGTCTGGCTTCCAATGGTTCGGCAGCAACGAATCCGGCGCCGAATTTGGCTCCGGGAATATCCCCGGCACTTTG GGCACGGATTACATCTGGCCTGATGCGACGGCTATTGCGACGCTGCATAGTGCCGGGATGAATATCTTTCGTGTG CCGTTCCTGATGGAGCGGTTGGTGCCGGATGAGTTGACTGGTGCCGCGGATGCGACGTATATGGCTGATCTGAAG GCTACGGTGCAAACCATCACAGACCTTGGTGCTTATGCGGTGGTGGATCCGCATAATTTTGGGAGATACTACGGC AACATCATCACCTCAACCAGCGACTTTGCGGCCTTCTGGACAACAGTAGCCAGCGAGTTCACCGACAATGACCTT GTCATCTTCGATACCAACAACGAATTCCACGACGAAGACCAAACCCTCGTGCTCGATCTCAATCAAGCCGCCATC ACCGCCATCCGCGCCACCGGTGCCACAACGCAATATATCTTCGTCGAAGGCAATTCCTACACCGGCGCCTGGACC TGGACCACCACCAACACGAACCTCGTCAACCTGACCGACCCCAACGACCATCTCATCTACGAAATGCACCAGTAC CTGGACAGCGATGGCTCCGGGACGAGTTCGACGTGCGTCAGCTCGACAATTGGTGCGGAGCGCATTGCTGATGCC ACAACCTGGTTGAAAGAGAATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTGTATGTGAG GAGGCGGTTACAGGCATGTTGGATGCGATGGTGGATGCTAGTGATGTTTGGCTGGGGGGCATGTGGTGGTCTGCT GGGCCTTGGTGGGGGGATTATATCTTCTCGTTGGAGCCCGATGATGGAATTGCTTATGAGTATTATTTGGGGGTG TTGGAGGGGTATACGCCTGGTTCATCTTCGGGATCATCTGGAGGGAGTACAACAAGTGCCGTGGCGAGTGCTAGT AGTACGTCGTCTGCTGGGAGTACTACGAGCAAAGTGACTACTACTACTGCTGCGACTGCTACATCGACGGCTGTA GCTGCGCACTATGCTCAGTGTGGTGGGGAGGGCTGGACTGGGGCGACGACTTGTGCGGATGGATATACCTGCACA GTAGAAAATGAGTGGTATTCGCAGTGTTTGTAG |
| Gene | >Ani_SJS100_1|g2393.t1 ATGAAGACTCTCTCCCTTGCAGCTGTCTTGCTCGTCCAAGCCTGGACTGCGAACAGCAGCCCGAGGGCTAAGCGG TCGTCTGGCTTCCAATGTACCTCTTCCTTCTTCACTACCTATTTGGGAGACACATATTGATAAGTGAACAGGGTT CGGCAGCAACGAATCCGGCGCCGAATTTGGCTCCGGGAATATCCCCGGCACTTTGGGCACGGATTACATCTGGCC TGATGCGACGGCTATTGCGACGCTGCATAGTGCCGGGATGAATATCTTTCGTGTGCCGTTCCTGATGGAGCGGTT GGTGCCGGATGAGTTGACTGGTGCCGCGGATGCGACGTATATGGCTGATCTGAAGGCTGTAAGTTCCCCTTATGA TAATAAGATGCACTGTGTCTGATTACAATGGTGGTAATGATGTAGACGGTGCAAACCATCACAGACCTTGGTGCT TATGCGGTGGTGGATCCGCATAATTTTGGGAGATAGTATGTCCTTCCTTCCCTTCCTTCACCTTCCTGTGGTATG GAACTAATGTGATACTGTCCAGCTACGGCAACATCATCACCTCAACCAGCGACTTTGCGGCCTTCTGGACAACAG TAGCCAGCGAGTTCACCGACAATGACCTTGTCATCTTCGATACCAGTACGTACCCTACCTTCCCCCAATCTCCCA CATACTAACATGATGTAAATAGACAACGAATTCCACGACGAAGACCAAACCCTCGTGCTCGATCTCAATCAAGCC GCCATCACCGCCATCCGCGCCACCGGTGCCACAACGCAATATATCTTCGTCGAAGGCAATTCCTACACCGGCGCC TGGACCTGGACCACCACCAACACGAACCTCGTCAACCTGACCGACCCCAACGACCATCTCATCTACGAAATGCAC CAGTACCTGGACAGCGATGGCTCCGGGACGAGTTCGACGTGCGTCAGCTCGACAATTGGTGCGGAGCGCATTGCT GATGCCACAACCTGGTTGAAAGAGAATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTGTA TGTGAGGAGGCGGTTACAGGCATGTTGGATGCGATGGTGGATGCTAGTGATGTTTGGCTGGGGGGCATGTGGTGG TCTGCTGGGCCTTGGTGGGGGGATTATATCTTCTCGTTGGAGCCCGATGATGGAATTGCTTATGAGTATTATTTG GGGGTGTTGGAGGGGTATACGCCTGGTTCATCTTCGGGATCATCTGGAGGGAGTACAACAAGTGCCGTGGCGAGT GCTAGTAGTACGTCGTCTGCTGGGAGTACTACGAGCAAAGTGACTACTACTACTGCTGCGACTGCTACATCGACG GCTGTAGCTGCGCACTATGCTCAGTGTGGTGGGGAGGGCTGGACTGGGGCGACGACTTGTGCGGATGGATATACC TGCACAGTAGAAAATGAGTGGTATTCGCAGTGTTTGTAG |