© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g2391.t1 |
| Gene name | |
| Location | scaffold_009:589678..590530 |
| Strand | - |
| Gene length (bp) | 852 |
| Transcript length (bp) | 852 |
| Coding sequence length (bp) | 852 |
| Protein length (aa) | 284 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00551 | Formyl_trans_N | Formyl transferase | 1.1E-37 | 88 | 264 |
| PF01842 | ACT | ACT domain | 1.2E-08 | 3 | 64 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | Yes |
| GO:0009058 | biosynthetic process | Yes |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2391.t1 MSYILTLSCPDRPGIVHAVTAYLVQQNLNIIDSSQYGDPTSQRFFMRVHFKDESSPAKSLDDLRTAFQPTAESLT MTFQLVPASSKPRVLIMVSKIGHCLNDLLFRASTGQLPIEIPLIVSNHPDFATLAATYNIPFLHLPVTADTKPQQ EGRILELIREHNIDLVVLARYMQVLSPMLCEAMSGKIINIHHSFLPSFKGAKPYHQAFDRGVKIVGATAHFVTSD LDEGPIIEQNVVRVNHAMSPKELTHAGSNVESNVLATAVKYFAERRVLLNGHKTVVFN* |
| Coding | >Ani_SJS100_1|g2391.t1 ATGAGCTACATTCTCACCCTCTCCTGCCCCGACCGCCCGGGCATTGTCCACGCCGTGACCGCCTACCTGGTGCAA CAGAACCTCAACATCATCGACAGCAGCCAATACGGCGACCCGACCAGCCAGCGCTTCTTCATGCGCGTGCACTTC AAGGATGAATCCTCTCCCGCCAAGTCCCTCGACGACCTGCGCACCGCTTTCCAGCCCACCGCCGAGTCCCTGACC ATGACCTTCCAGCTCGTCCCCGCCTCCTCCAAGCCCCGCGTGTTGATCATGGTCTCTAAGATCGGCCACTGCCTC AACGACCTCCTCTTCCGCGCCTCGACTGGCCAGCTCCCCATCGAGATCCCCCTCATTGTTTCCAACCACCCCGAC TTCGCTACCCTGGCTGCTACCTACAACATCCCCTTCTTGCATCTCCCCGTGACCGCCGACACCAAGCCCCAGCAG GAGGGACGCATCTTGGAGCTGATCCGCGAACACAACATTGATCTGGTTGTCCTGGCCCGCTACATGCAAGTGCTG TCGCCTATGCTGTGCGAGGCCATGTCTGGAAAGATCATCAACATTCATCACAGTTTCTTGCCCAGTTTCAAGGGT GCTAAGCCTTACCACCAGGCTTTTGACCGCGGTGTCAAGATTGTCGGTGCTACGGCGCACTTTGTCACCAGTGAT TTGGATGAGGGTCCGATTATTGAGCAGAATGTTGTGCGTGTCAACCACGCTATGAGCCCCAAGGAGTTGACTCAT GCTGGATCCAACGTTGAGAGCAATGTCTTGGCTACGGCGGTGAAGTACTTCGCTGAGCGGAGAGTCCTGCTCAAC GGACACAAGACTGTTGTCTTCAACTAG |
| Transcript | >Ani_SJS100_1|g2391.t1 ATGAGCTACATTCTCACCCTCTCCTGCCCCGACCGCCCGGGCATTGTCCACGCCGTGACCGCCTACCTGGTGCAA CAGAACCTCAACATCATCGACAGCAGCCAATACGGCGACCCGACCAGCCAGCGCTTCTTCATGCGCGTGCACTTC AAGGATGAATCCTCTCCCGCCAAGTCCCTCGACGACCTGCGCACCGCTTTCCAGCCCACCGCCGAGTCCCTGACC ATGACCTTCCAGCTCGTCCCCGCCTCCTCCAAGCCCCGCGTGTTGATCATGGTCTCTAAGATCGGCCACTGCCTC AACGACCTCCTCTTCCGCGCCTCGACTGGCCAGCTCCCCATCGAGATCCCCCTCATTGTTTCCAACCACCCCGAC TTCGCTACCCTGGCTGCTACCTACAACATCCCCTTCTTGCATCTCCCCGTGACCGCCGACACCAAGCCCCAGCAG GAGGGACGCATCTTGGAGCTGATCCGCGAACACAACATTGATCTGGTTGTCCTGGCCCGCTACATGCAAGTGCTG TCGCCTATGCTGTGCGAGGCCATGTCTGGAAAGATCATCAACATTCATCACAGTTTCTTGCCCAGTTTCAAGGGT GCTAAGCCTTACCACCAGGCTTTTGACCGCGGTGTCAAGATTGTCGGTGCTACGGCGCACTTTGTCACCAGTGAT TTGGATGAGGGTCCGATTATTGAGCAGAATGTTGTGCGTGTCAACCACGCTATGAGCCCCAAGGAGTTGACTCAT GCTGGATCCAACGTTGAGAGCAATGTCTTGGCTACGGCGGTGAAGTACTTCGCTGAGCGGAGAGTCCTGCTCAAC GGACACAAGACTGTTGTCTTCAACTAG |
| Gene | >Ani_SJS100_1|g2391.t1 ATGAGCTACATTCTCACCCTCTCCTGCCCCGACCGCCCGGGCATTGTCCACGCCGTGACCGCCTACCTGGTGCAA CAGAACCTCAACATCATCGACAGCAGCCAATACGGCGACCCGACCAGCCAGCGCTTCTTCATGCGCGTGCACTTC AAGGATGAATCCTCTCCCGCCAAGTCCCTCGACGACCTGCGCACCGCTTTCCAGCCCACCGCCGAGTCCCTGACC ATGACCTTCCAGCTCGTCCCCGCCTCCTCCAAGCCCCGCGTGTTGATCATGGTCTCTAAGATCGGCCACTGCCTC AACGACCTCCTCTTCCGCGCCTCGACTGGCCAGCTCCCCATCGAGATCCCCCTCATTGTTTCCAACCACCCCGAC TTCGCTACCCTGGCTGCTACCTACAACATCCCCTTCTTGCATCTCCCCGTGACCGCCGACACCAAGCCCCAGCAG GAGGGACGCATCTTGGAGCTGATCCGCGAACACAACATTGATCTGGTTGTCCTGGCCCGCTACATGCAAGTGCTG TCGCCTATGCTGTGCGAGGCCATGTCTGGAAAGATCATCAACATTCATCACAGTTTCTTGCCCAGTTTCAAGGGT GCTAAGCCTTACCACCAGGCTTTTGACCGCGGTGTCAAGATTGTCGGTGCTACGGCGCACTTTGTCACCAGTGAT TTGGATGAGGGTCCGATTATTGAGCAGAATGTTGTGCGTGTCAACCACGCTATGAGCCCCAAGGAGTTGACTCAT GCTGGATCCAACGTTGAGAGCAATGTCTTGGCTACGGCGGTGAAGTACTTCGCTGAGCGGAGAGTCCTGCTCAAC GGACACAAGACTGTTGTCTTCAACTAG |