© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g2372.t1 |
| Gene name | |
| Location | scaffold_009:537572..538627 |
| Strand | + |
| Gene length (bp) | 1055 |
| Transcript length (bp) | 849 |
| Coding sequence length (bp) | 849 |
| Protein length (aa) | 283 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF17784 | Sulfotransfer_4 | Sulfotransferase domain | 9.1E-45 | 19 | 241 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 257 | 279 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2372.t1 MSRQVDRLAEPADKKKMRLIVASCSRTGTLGLHEALEMIGYTPYHMIDLMLKGRKPHIKAFTEGILAHNNRFSGI KRYETPDLDRWIGNCDCLMEIPSYIGLRALAGYIEDPDVKFIVTERSPNKWVKSFNNTVGEAILAGHKFPLNILR RFDSEVDQFFNLAEVMYWAYSDGTNPGHPNNEAALRKNYVEYIQEVKKTLPKDRLLVVSLEDGLGWEEICPFLDV PIPEEKYPRGNEPDRFHKIIEEYLEPKLKNSMINLGTFVATIAGIGGYVGWRLYRGL* |
| Coding | >Ani_SJS100_1|g2372.t1 ATGTCGCGCCAAGTTGACAGGCTGGCTGAGCCAGCCGACAAAAAGAAGATGCGGCTCATTGTAGCCAGCTGCAGC AGAACGGGTACTCTGGGTCTCCATGAAGCCCTAGAGATGATTGGATATACACCATATCACATGATCGACCTGATG CTCAAGGGTAGAAAGCCTCACATCAAAGCCTTCACAGAGGGCATCCTAGCTCATAATAATCGATTCTCTGGTATC AAGAGATACGAGACGCCAGACCTTGATCGATGGATAGGGAATTGTGACTGCTTGATGGAGATACCAAGCTATATT GGGCTCCGAGCCCTGGCTGGTTATATTGAAGACCCCGACGTCAAATTTATAGTGACTGAGCGCTCGCCTAACAAA TGGGTCAAATCGTTCAACAACACGGTTGGTGAAGCGATCTTGGCGGGCCACAAGTTTCCCCTCAACATTCTGAGG CGCTTTGACTCAGAAGTGGATCAGTTCTTCAATCTGGCCGAAGTGATGTACTGGGCCTATTCTGACGGAACAAAC CCCGGCCATCCGAACAACGAAGCGGCTCTTCGTAAGAACTATGTTGAATACATCCAAGAAGTGAAGAAGACACTG CCAAAAGATAGACTTCTTGTCGTCAGTCTTGAGGATGGACTGGGCTGGGAGGAGATCTGTCCATTCTTAGACGTG CCTATTCCTGAAGAGAAGTACCCCCGAGGCAATGAGCCAGACAGATTCCACAAAATTATTGAAGAGTATCTGGAG CCAAAATTGAAGAATTCCATGATCAACTTAGGCACATTTGTGGCCACAATCGCTGGGATAGGTGGCTATGTGGGC TGGAGGTTATATCGCGGGCTTTAG |
| Transcript | >Ani_SJS100_1|g2372.t1 ATGTCGCGCCAAGTTGACAGGCTGGCTGAGCCAGCCGACAAAAAGAAGATGCGGCTCATTGTAGCCAGCTGCAGC AGAACGGGTACTCTGGGTCTCCATGAAGCCCTAGAGATGATTGGATATACACCATATCACATGATCGACCTGATG CTCAAGGGTAGAAAGCCTCACATCAAAGCCTTCACAGAGGGCATCCTAGCTCATAATAATCGATTCTCTGGTATC AAGAGATACGAGACGCCAGACCTTGATCGATGGATAGGGAATTGTGACTGCTTGATGGAGATACCAAGCTATATT GGGCTCCGAGCCCTGGCTGGTTATATTGAAGACCCCGACGTCAAATTTATAGTGACTGAGCGCTCGCCTAACAAA TGGGTCAAATCGTTCAACAACACGGTTGGTGAAGCGATCTTGGCGGGCCACAAGTTTCCCCTCAACATTCTGAGG CGCTTTGACTCAGAAGTGGATCAGTTCTTCAATCTGGCCGAAGTGATGTACTGGGCCTATTCTGACGGAACAAAC CCCGGCCATCCGAACAACGAAGCGGCTCTTCGTAAGAACTATGTTGAATACATCCAAGAAGTGAAGAAGACACTG CCAAAAGATAGACTTCTTGTCGTCAGTCTTGAGGATGGACTGGGCTGGGAGGAGATCTGTCCATTCTTAGACGTG CCTATTCCTGAAGAGAAGTACCCCCGAGGCAATGAGCCAGACAGATTCCACAAAATTATTGAAGAGTATCTGGAG CCAAAATTGAAGAATTCCATGATCAACTTAGGCACATTTGTGGCCACAATCGCTGGGATAGGTGGCTATGTGGGC TGGAGGTTATATCGCGGGCTTTAG |
| Gene | >Ani_SJS100_1|g2372.t1 ATGTCGCGCCAAGTTGACAGGCTGGCTGAGCCAGCCGACAAAAAGAAGATGCGGCTCATTGTAGCCAGCTGCAGC AGGTAAGGAATTCCGTTGTCGGCTTAGATGCAGCCAGGCCTATCCTGGTAACAAGACGAACGTCTTTCGGACTGA CGGATGTCGATAACAGAACGGGTACTCTGGGTCTCCATGAAGCCCTAGAGATGATTGGATATACACCATATCACA TGATCGACCTGATGCTCAAGGGTAGAAAGCCTCACATCAAAGCCTTCACAGAGGGCATCCTAGCTCATAATAATC GATTCTCTGGTATCAAGAGATACGAGACGCCAGACCTTGATCGATGGATAGGGAATTGTGACGTTCGTTGACCTT GATATCCGCTGTAACCTTAACAGCCGTGCGCTGACTGCCAGGTGTACTAGTGCTTGATGGAGATACCAAGCTATA TTGGGCTCCGAGCCCTGGCTGGTTATATTGAAGACCCCGACGTCAAATTTATAGTGACTGAGCGCTCGCCTAACA AATGGGTCAAATCGTTCAACAACACGGTTGGTGAAGCGATCTTGGCGGGCCACAAGTTTCCCCTCAACATTCTGA GGCGCTTTGACTCAGAAGTGGATCAGTTCTTCAATCTGGCCGAAGTGATGTACTGGGCCTATTCTGACGGAACAA ACCCCGGCCATCCGAACAACGAAGCGGCTCTTCGTAAGAACTATGTTGAATAGTAAGAGTTGCTTTTGGCTTTGA CGGTGATATCTGGGCTGATCATAGGCAATAGCATCCAAGAAGTGAAGAAGACACTGCCAAAAGATAGACTTCTTG TCGTCAGTCTTGAGGATGGACTGGGCTGGGAGGAGATCTGTCCATTCTTAGACGTGCCTATTCCTGAAGAGAAGT ACCCCCGAGGCAATGAGCCAGACAGATTCCACAAAATTATTGAAGAGTATCTGGAGCCAAAATTGAAGAATTCCA TGATCAACTTAGGCACATTTGTGGCCACAATCGCTGGGATAGGTGGCTATGTGGGCTGGAGGTTATATCGCGGGC TTTAG |