Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2354.t1
Gene name
Locationscaffold_009:491925..492668
Strand+
Gene length (bp)743
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 21 40 19
2 55 77 22
3 90 112 22
4 127 149 22
5 169 186 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2354.t1
MNWTVIPRDDSLPSMTITVRIIVLVLAIPTTFVCGLRLYLRKFVLNSWGLDDWMVMIALVMVNGFSTLAFTITYY
GLGKKTKDVPDADLLVWWKIYYAALCSYLLVAASVKTSLTVFIMRLFPTHSISIAGKSILGFLAVFTLAGTLALA
FQCRPVRAGFDKTIPDAKCYSVNTSFAILMAQGVIMF*
Coding >Ani_SJS100_1|g2354.t1
ATGAACTGGACGGTCATACCACGAGATGATAGTCTACCTTCGATGACTATTACTGTTCGCATCATAGTCCTCGTC
CTTGCTATTCCAACTACCTTTGTTTGCGGTCTCCGGCTCTACTTACGGAAATTTGTTTTGAACTCATGGGGACTG
GATGACTGGATGGTAATGATCGCTCTTGTCATGGTGAATGGTTTCTCGACGCTTGCATTTACGATCACCTACTAT
GGCCTCGGAAAAAAGACCAAGGATGTTCCAGATGCAGACCTGCTGGTTTGGTGGAAGATCTACTATGCGGCGCTC
TGCAGCTACTTGCTTGTTGCTGCATCGGTCAAAACAAGCCTCACTGTGTTTATAATGCGGCTTTTCCCCACCCAC
AGTATAAGCATCGCTGGCAAGTCCATTTTGGGATTTCTAGCAGTCTTCACGCTCGCAGGAACCTTGGCTTTGGCA
TTCCAGTGTCGACCCGTTCGCGCTGGATTCGACAAAACCATCCCAGATGCGAAATGTTACAGTGTCAACACTTCC
TTTGCCATCCTCATGGCGCAAGGTGTCATTATGTTTTGA
Transcript >Ani_SJS100_1|g2354.t1
ATGAACTGGACGGTCATACCACGAGATGATAGTCTACCTTCGATGACTATTACTGTTCGCATCATAGTCCTCGTC
CTTGCTATTCCAACTACCTTTGTTTGCGGTCTCCGGCTCTACTTACGGAAATTTGTTTTGAACTCATGGGGACTG
GATGACTGGATGGTAATGATCGCTCTTGTCATGGTGAATGGTTTCTCGACGCTTGCATTTACGATCACCTACTAT
GGCCTCGGAAAAAAGACCAAGGATGTTCCAGATGCAGACCTGCTGGTTTGGTGGAAGATCTACTATGCGGCGCTC
TGCAGCTACTTGCTTGTTGCTGCATCGGTCAAAACAAGCCTCACTGTGTTTATAATGCGGCTTTTCCCCACCCAC
AGTATAAGCATCGCTGGCAAGTCCATTTTGGGATTTCTAGCAGTCTTCACGCTCGCAGGAACCTTGGCTTTGGCA
TTCCAGTGTCGACCCGTTCGCGCTGGATTCGACAAAACCATCCCAGATGCGAAATGTTACAGTGTCAACACTTCC
TTTGCCATCCTCATGGCGCAAGGTGTCATTATGTTTTGA
Gene >Ani_SJS100_1|g2354.t1
ATGAACTGGACGGTCATACCACGAGATGATAGTCTACCTTCGATGACTATTACTGTTCGCATCATAGTCCTCGTC
CTTGCTATTCCAACTACCTTTGTTTGCGGTCTCCGGGTGTGTACCTGACCCTTGATAGGGCTGACGAAGCACAAC
TCATTTAATAATCTGAATCATAGCTCTACTTACGGAAATTTGTTTTGAACTCATGGGGACTGGATGACTGGATGG
TAATGATCGCTCTTGTTAGTCTTCCCAAATGCTCGAGCAGTGGGCGACGGATTACTGAGCCACAACAGGTCATGG
TGAATGGTTTCTCGACGCTTGCATTTACGATCACCTACTATGGCCTCGGAAAAAAGACCAAGGATGTTCCAGATG
CAGACCTGCTGGTTTGGTGGAAGGTACGCTAAAAGCTAACACATACTCTAAATTGGACAGCGGTTGAGGTGACAG
GATATAATTAGATCTACTATGCGGCGCTCTGCAGCTACTTGCTTGTTGCTGCATCGGTCAAAACAAGCCTCACTG
TGTTTATAATGCGGCTTTTCCCCACCCACAGTATAAGCATCGCTGGCAAGTCCATTTTGGGATTTCTAGCAGTCT
TCACGCTCGCAGGAACCTTGGCTTTGGCATTCCAGTGTCGACCCGTTCGCGCTGGATTCGACAAAACCATCCCAG
ATGCGAAATGTTACAGTGTCAACACTTCCTTTGCCATCCTCATGGCGCAAGGTGTCATTATGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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