© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2325.t1 |
| Gene name | |
| Location | scaffold_009:408368..411050 |
| Strand | + |
| Gene length (bp) | 2682 |
| Transcript length (bp) | 2094 |
| Coding sequence length (bp) | 2094 |
| Protein length (aa) | 698 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02386 | TrkH | Cation transport protein | 6.0E-97 | 262 | 669 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 85 | 107 | 22 |
| 4 | 291 | 313 | 22 |
| 5 | 326 | 348 | 22 |
| 6 | 363 | 385 | 22 |
| 7 | 425 | 447 | 22 |
| 8 | 462 | 481 | 19 |
| 9 | 488 | 507 | 19 |
| 10 | 576 | 594 | 18 |
| 11 | 601 | 623 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2325.t1 MTSRGWRQLLSRSIIAMLPPFNFLTLHYVYFIATSLICSVIFWGSSTPRRSVSYTDSLFLCISAMTGAGLNTVDL SSLNSFQQSILFALLLLGHAILISITVLFVRMGAFQAKFKGISLERARKALQQQLVGQDTILEPIQESVASEEHY QLAKIDGATLDVKHAVTAGAAPADKCNDVRDDDQIRWVDDDQVTLSHMRARQKHHHHHRVFPMVGVGARLDLNNH PRDAAPRMTQNDGDTDLPALKGLIKGTQKYFRSKGSIARNSQFHGLTPEERERLGGVEYKAVSLLLVIVALYWIL FLICGIIGMGTWIAVNHPDIPRSNGLSPFWTGAFFAVSAFVNSGMSLLDANMTAFQTNAYPLLTMAFLILSGNTL YPCFLRFIIWAMRCLIPDKPSWATWKVTLDFILDHPRRVYTNLFPRRHTWYLLGTIIILNAIDWAGFEVLSIGNK EIESLPTGYRVLDGLFQACAVRAGGFYVVTIADLRQGLLVLYVLMMYVSAYPVLVTMRNTNVYEERSLGIYAHDN TDDETEEKASPNMLIQLVRHHLLGRQDASTPEASRSYFVHQQLRSQLSHDLWWIALAVFLIAIAESGNYSRMPVA YSTLNIIFEVVSAYGCVGISVGFPSSNASFCSSWHTISKLILAAVMLRGRHRGLPVAIDRAVMLPNESLEWAEEE DAAMRREQSRAWGSDKMPVGSV* |
| Coding | >Ani_SJS100_1|g2325.t1 ATGACTTCTCGAGGCTGGCGGCAGCTTCTGAGTCGAAGCATAATTGCCATGCTTCCGCCATTCAACTTCCTCACG CTTCATTATGTATACTTCATTGCGACGTCTTTGATATGCAGCGTCATATTCTGGGGTTCCTCGACTCCGCGGCGC AGTGTTTCATACACAGACTCCCTATTTCTATGCATCAGTGCCATGACGGGTGCTGGCTTAAATACCGTCGACCTG TCTTCCCTGAATTCGTTCCAACAGTCTATCCTCTTCGCACTCTTACTGTTGGGGCATGCTATTCTCATCTCAATA ACGGTGCTCTTCGTCAGGATGGGCGCGTTTCAAGCCAAATTTAAAGGCATATCACTTGAACGTGCCCGTAAAGCA CTACAGCAACAACTGGTAGGACAAGACACCATACTTGAACCAATCCAAGAGAGTGTTGCCAGCGAGGAACACTAT CAGCTGGCGAAGATTGACGGTGCTACCCTTGATGTCAAGCACGCGGTGACAGCAGGAGCTGCACCCGCAGATAAG TGCAACGACGTGCGAGATGACGACCAGATCCGATGGGTCGACGATGATCAAGTCACCCTCAGCCATATGAGGGCA CGTCAAAAGCACCATCATCACCACCGCGTTTTCCCCATGGTAGGCGTTGGGGCCCGTCTTGACTTGAACAACCAC CCCCGAGATGCTGCGCCAAGAATGACCCAGAATGATGGAGATACAGATTTACCTGCCCTCAAAGGCCTTATCAAG GGCACACAAAAATACTTTAGGTCAAAAGGATCTATCGCACGAAATTCCCAGTTCCATGGGCTTACCCCTGAAGAG CGAGAGAGACTGGGAGGTGTCGAGTATAAGGCCGTTTCCTTACTACTGGTCATTGTTGCCCTCTACTGGATCCTG TTCCTCATTTGTGGTATCATTGGGATGGGTACCTGGATCGCAGTGAATCATCCAGATATACCTCGATCAAACGGC CTATCGCCTTTCTGGACAGGCGCATTTTTTGCTGTGTCTGCATTTGTGAACAGCGGCATGTCGCTCTTGGATGCG AATATGACTGCATTCCAGACAAATGCGTACCCTTTGCTTACCATGGCATTCTTGATTCTGTCTGGGAACACGCTT TACCCATGCTTCTTGCGGTTTATTATCTGGGCAATGAGATGCTTGATCCCAGATAAGCCGTCATGGGCGACATGG AAGGTTACTCTGGACTTCATCCTTGACCATCCTAGAAGGGTTTACACAAACCTCTTCCCGAGAAGACATACATGG TACTTGCTCGGTACCATTATCATCTTGAATGCGATCGACTGGGCTGGCTTCGAAGTCCTTTCAATCGGAAACAAG GAGATTGAAAGCTTGCCAACAGGGTATCGAGTCCTAGACGGACTGTTCCAGGCTTGTGCTGTACGAGCGGGAGGC TTCTACGTCGTTACGATTGCGGACCTCCGTCAGGGACTACTCGTTCTATATGTTCTCATGATGTATGTATCAGCA TACCCAGTGCTGGTTACCATGAGAAACACAAACGTATACGAAGAGCGCTCCCTCGGAATCTACGCTCACGACAAC ACGGACGACGAGACCGAAGAGAAGGCCTCACCAAACATGCTCATCCAATTAGTCCGACACCACCTCCTCGGCCGA CAAGATGCATCCACCCCCGAAGCATCCCGCAGTTACTTCGTCCACCAGCAACTGCGTTCCCAACTGAGCCATGAC CTTTGGTGGATCGCCCTCGCGGTCTTCCTCATTGCCATCGCGGAATCAGGAAACTACAGCCGCATGCCCGTGGCA TATTCGACCCTGAATATCATTTTCGAGGTCGTCTCCGCCTACGGTTGCGTCGGCATCAGTGTGGGCTTTCCGAGC TCGAATGCCTCGTTCTGTAGCTCCTGGCATACCATCAGCAAACTTATCTTGGCGGCTGTTATGCTGCGCGGTCGC CACAGGGGTCTTCCGGTCGCTATTGATCGCGCTGTCATGCTACCGAATGAGTCCCTTGAGTGGGCGGAGGAGGAA GATGCTGCTATGAGACGTGAGCAGTCTCGTGCTTGGGGGAGTGATAAGATGCCTGTGGGATCAGTTTAA |
| Transcript | >Ani_SJS100_1|g2325.t1 ATGACTTCTCGAGGCTGGCGGCAGCTTCTGAGTCGAAGCATAATTGCCATGCTTCCGCCATTCAACTTCCTCACG CTTCATTATGTATACTTCATTGCGACGTCTTTGATATGCAGCGTCATATTCTGGGGTTCCTCGACTCCGCGGCGC AGTGTTTCATACACAGACTCCCTATTTCTATGCATCAGTGCCATGACGGGTGCTGGCTTAAATACCGTCGACCTG TCTTCCCTGAATTCGTTCCAACAGTCTATCCTCTTCGCACTCTTACTGTTGGGGCATGCTATTCTCATCTCAATA ACGGTGCTCTTCGTCAGGATGGGCGCGTTTCAAGCCAAATTTAAAGGCATATCACTTGAACGTGCCCGTAAAGCA CTACAGCAACAACTGGTAGGACAAGACACCATACTTGAACCAATCCAAGAGAGTGTTGCCAGCGAGGAACACTAT CAGCTGGCGAAGATTGACGGTGCTACCCTTGATGTCAAGCACGCGGTGACAGCAGGAGCTGCACCCGCAGATAAG TGCAACGACGTGCGAGATGACGACCAGATCCGATGGGTCGACGATGATCAAGTCACCCTCAGCCATATGAGGGCA CGTCAAAAGCACCATCATCACCACCGCGTTTTCCCCATGGTAGGCGTTGGGGCCCGTCTTGACTTGAACAACCAC CCCCGAGATGCTGCGCCAAGAATGACCCAGAATGATGGAGATACAGATTTACCTGCCCTCAAAGGCCTTATCAAG GGCACACAAAAATACTTTAGGTCAAAAGGATCTATCGCACGAAATTCCCAGTTCCATGGGCTTACCCCTGAAGAG CGAGAGAGACTGGGAGGTGTCGAGTATAAGGCCGTTTCCTTACTACTGGTCATTGTTGCCCTCTACTGGATCCTG TTCCTCATTTGTGGTATCATTGGGATGGGTACCTGGATCGCAGTGAATCATCCAGATATACCTCGATCAAACGGC CTATCGCCTTTCTGGACAGGCGCATTTTTTGCTGTGTCTGCATTTGTGAACAGCGGCATGTCGCTCTTGGATGCG AATATGACTGCATTCCAGACAAATGCGTACCCTTTGCTTACCATGGCATTCTTGATTCTGTCTGGGAACACGCTT TACCCATGCTTCTTGCGGTTTATTATCTGGGCAATGAGATGCTTGATCCCAGATAAGCCGTCATGGGCGACATGG AAGGTTACTCTGGACTTCATCCTTGACCATCCTAGAAGGGTTTACACAAACCTCTTCCCGAGAAGACATACATGG TACTTGCTCGGTACCATTATCATCTTGAATGCGATCGACTGGGCTGGCTTCGAAGTCCTTTCAATCGGAAACAAG GAGATTGAAAGCTTGCCAACAGGGTATCGAGTCCTAGACGGACTGTTCCAGGCTTGTGCTGTACGAGCGGGAGGC TTCTACGTCGTTACGATTGCGGACCTCCGTCAGGGACTACTCGTTCTATATGTTCTCATGATGTATGTATCAGCA TACCCAGTGCTGGTTACCATGAGAAACACAAACGTATACGAAGAGCGCTCCCTCGGAATCTACGCTCACGACAAC ACGGACGACGAGACCGAAGAGAAGGCCTCACCAAACATGCTCATCCAATTAGTCCGACACCACCTCCTCGGCCGA CAAGATGCATCCACCCCCGAAGCATCCCGCAGTTACTTCGTCCACCAGCAACTGCGTTCCCAACTGAGCCATGAC CTTTGGTGGATCGCCCTCGCGGTCTTCCTCATTGCCATCGCGGAATCAGGAAACTACAGCCGCATGCCCGTGGCA TATTCGACCCTGAATATCATTTTCGAGGTCGTCTCCGCCTACGGTTGCGTCGGCATCAGTGTGGGCTTTCCGAGC TCGAATGCCTCGTTCTGTAGCTCCTGGCATACCATCAGCAAACTTATCTTGGCGGCTGTTATGCTGCGCGGTCGC CACAGGGGTCTTCCGGTCGCTATTGATCGCGCTGTCATGCTACCGAATGAGTCCCTTGAGTGGGCGGAGGAGGAA GATGCTGCTATGAGACGTGAGCAGTCTCGTGCTTGGGGGAGTGATAAGATGCCTGTGGGATCAGTTTAA |
| Gene | >Ani_SJS100_1|g2325.t1 ATGACTTGTGAGTCGGTCTTTGCTTAAATGCCTCTTGCCTTTTATTTCCCGCTGTAGTCCTTCAACATGGCCTGC ATCTTTGCCCCTTGCATGTCATCATGGCTACGAAAGCAGCCACAAGCATCTAAGAAAGAGGAGAAGGATTACTAT ATCCACCATCTCAGATCCCACAATCTAGTGGTTCTCAATTACTGACATGACGGATCCCTAGCTCGAGGCTGGCGG CAGCTTCTGAGTCGAAGCATAATTGCCATGCTTCCGCCATTCAACTTCCTCACGCTTCATTATGTATACTTCATT GCGACGTCTTTGATATGCAGCGTCATATTCTGGGGTTCCTCGACTCCGCGGCGCAGTGTTTCATACACAGACTCC CTATTTCTATGCATCAGTGCCATGACGGGTGCTGGCTTAAATACCGTATGTTGCTTTCCCATCCCTCGATAGAGC TAGTAAAGTAACTCGTAACAGGTCGACCTGTCTTCCCTGAATTCGTTCCAACAGTCTATCCTCTTCGCACTCTTA CTGTTGGGGCATGCTATTCTCATCTCAATAACGGTGCTCTTCGTCAGGATGGGCGCGTTTCAAGCCAAATTTAAA GGCATATCACTTGAACGTGCCCGTAAAGCACTACAGCAACAACTGGTAGGACAAGACACCATACTTGAACCAATC CAAGAGAGTGTTGCCAGCGAGGAACACTATCAGCTGGCGAAGATTGACGGTGCTACCCTTGATGTCAAGCACGCG GTGACAGCAGGAGCTGCACCCGCAGATAAGTGCAACGACGTGCGAGATGACGACCAGATCCGATGGGTCGACGAT GATCAAGTCACCCTCAGCCATATGAGGGCACGTCAAAAGCACCATCATCACCACCGCGTTTTCCCCATGGTAGGC GTTGGGGCCCGTCTTGACTTGAACAACCACCCCCGAGATGCTGCGCCAAGAATGACCCAGAATGATGGAGATACA GATTTACCTGCCCTCAAAGGCCTTATCAAGGGCACACAAAAATACTTTAGGTCAAAAGGATCTATCGCACGAAAT TCCCAGTTCCATGGGCTTACCCCTGAAGAGCGAGAGAGACTGGGAGGTGTCGAGTATAAGGCCGTTTCCTTACTA CTGGTCATTGTTGCCCTCTACTGGATCCTGTTCCTCATTTGTGGTATCATTGGGATGGGTACCTGGATCGCAGTG AATCATCCAGATATACCTCGATCAAACGGCCTATCGCCTTTCTGGACAGGCGCATTTTTTGCTGTGTCTGCATTT GTGAACAGCGGCATGTCGCTCTTGGATGCGAATATGACTGCATTCCAGACAAAGTATGATCTCCCCTGTGTGCAT TGTGTCTGAAAGCATGCTGATTGTTATATAGTGCGTACCCTTTGCTTACCATGGCATTCTTGATTCTGTCTGGGA ACACGCTTTACCCATGCTTCTTGCGGTTTATTATCTGGGCAATGAGATGCTTGATCCCAGATAAGCCGTCATGGG CGACATGGAAGGTTACTCTGGACTTCATCCTTGACCATCCTAGAAGGGTATGCCGCCGGATTCCAGGTTTCTTCA CAGTTTTCTACGCTAACCTAAGCGCAGGTTTACACAAACCTCTTCCCGAGAAGACATACATGGTACTTGCTCGGT ACCATTATCATCTTGAATGCGATCGACTGGGCTGGCTTCGAAGTCCTTTCAATCGGAAACAAGGAGATTGAAAGC TTGCCAACAGGGTATCGAGTCCTAGACGGACTGTTCCAGGCTTGTGGTTCGTATACAACTTAACTTTGCTGTGGG TCAAATCTTCATCTGACACACTGTGTTGTCCAGCTGTACGAGCGGGAGGCTTCTACGTCGTTACGATTGCGGACC TCCGTCAGGGACTACTCGTTCTATATGGTAAGCACTTGTTTCCCCAAGCTTTAATCAGAATTATACTAACGTTCC ACAGTTCTCATGATGGTCAGTATATTAGTAGTTTGTAGTCGACACAGATCAAACTAACCTTATATGTATGTAGTA TGTATCAGCATACCCAGTGCTGGTTACCATGAGGTCAGTAACAATCGCTCCTCTCCTTCCTCCCAACCACCCACT AACGACCACAGAAACACAAACGTATACGAAGAGCGCTCCCTCGGAATCTACGCTCACGACAACACGGACGACGAG ACCGAAGAGAAGGCCTCACCAAACATGCTCATCCAATTAGTCCGACACCACCTCCTCGGCCGACAAGATGCATCC ACCCCCGAAGCATCCCGCAGTTACTTCGTCCACCAGCAACTGCGTTCCCAACTGAGCCATGACCTTTGGTGGATC GCCCTCGCGGTCTTCCTCATTGCCATCGCGGAATCAGGAAACTACAGCCGCATGCCCGTGGCATATTCGACCCTG AATATCATTTTCGAGGTCGTCTCCGCCTACGGTTGCGTCGGCATCAGTGTGGGCTTTCCGAGCTCGAATGCCTCG TTCTGTAGCTCCTGGCATACCATCAGCAAACTTATCTTGGCGGCTGTTATGCTGCGCGGTCGCCACAGGGGTCTT CCGGTCGCTATTGATCGCGCTGTCATGCTACCGAATGAGTCCCTTGAGTGGGCGGAGGAGGAAGATGCTGCTATG AGACGTGAGCAGTCTCGTGCTTGGGGGAGTGATAAGATGCCTGTGGGATCAGTTTAA |