Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g23.t1
Gene name
Locationscaffold_001:66620..67550
Strand+
Gene length (bp)930
Transcript length (bp)831
Coding sequence length (bp)831
Protein length (aa) 277

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 50 72 22
3 76 98 22
4 140 162 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g23.t1
MGFGGVLLRASNLSIRVLQFLAAAVILGIFSYFLAVLSRHDQDIPRWMKAVEGLSGAATLYGILGILFTCCLGGV
AFFAFLAIVLDVCFIGAMVAIAIMTRHGTQSCSGRVTTPLGSGNSSDDSPSGTSYGYACELEKASFAVSIIGIVF
FLISILLQVLYARYHKHEKRFGPSPANGYTSGTTRGFAFWRRNKNNPDTASADDMLPSHPLPRDVELGANGTTAA
EKEDGLNGTNVGATTGSGGYMPWRSNVNGGTTTAGQTGTYGYGNSAYTGNY*
Coding >Ani_SJS100_1|g23.t1
ATGGGCTTCGGCGGCGTTCTTTTGCGCGCTTCCAACCTCTCCATCCGTGTTCTCCAATTCCTCGCCGCAGCTGTC
ATTCTCGGCATCTTTTCCTACTTTCTTGCTGTCCTTTCTCGACATGACCAGGATATCCCGCGCTGGATGAAAGCC
GTCGAGGGTCTGTCCGGCGCTGCGACCCTCTATGGCATCCTCGGTATCCTATTCACTTGCTGCCTTGGCGGCGTC
GCCTTCTTCGCCTTCCTCGCCATTGTCCTCGATGTCTGCTTCATCGGTGCCATGGTCGCCATTGCTATCATGACC
CGTCATGGCACGCAAAGCTGCTCTGGTCGCGTGACCACCCCTCTCGGGTCTGGTAATAGCAGTGATGACTCACCG
TCAGGGACAAGCTATGGCTACGCCTGCGAACTGGAGAAAGCCTCCTTTGCGGTGTCCATTATTGGGATCGTCTTC
TTCCTGATCTCAATTCTTCTTCAAGTCCTCTACGCCCGATATCACAAGCACGAGAAGCGCTTTGGCCCCTCCCCC
GCAAACGGCTACACCTCCGGCACTACCCGGGGCTTCGCTTTCTGGAGAAGAAACAAGAACAACCCCGACACTGCT
AGTGCTGATGACATGCTGCCTTCGCATCCATTGCCCAGGGATGTGGAGCTTGGTGCGAACGGCACAACGGCAGCA
GAGAAGGAAGATGGCTTGAATGGTACCAATGTCGGCGCTACTACCGGCAGTGGTGGATATATGCCGTGGAGAAGC
AATGTGAATGGTGGTACTACCACTGCGGGACAGACTGGGACTTACGGATATGGAAATTCGGCATATACGGGGAAT
TATTAA
Transcript >Ani_SJS100_1|g23.t1
ATGGGCTTCGGCGGCGTTCTTTTGCGCGCTTCCAACCTCTCCATCCGTGTTCTCCAATTCCTCGCCGCAGCTGTC
ATTCTCGGCATCTTTTCCTACTTTCTTGCTGTCCTTTCTCGACATGACCAGGATATCCCGCGCTGGATGAAAGCC
GTCGAGGGTCTGTCCGGCGCTGCGACCCTCTATGGCATCCTCGGTATCCTATTCACTTGCTGCCTTGGCGGCGTC
GCCTTCTTCGCCTTCCTCGCCATTGTCCTCGATGTCTGCTTCATCGGTGCCATGGTCGCCATTGCTATCATGACC
CGTCATGGCACGCAAAGCTGCTCTGGTCGCGTGACCACCCCTCTCGGGTCTGGTAATAGCAGTGATGACTCACCG
TCAGGGACAAGCTATGGCTACGCCTGCGAACTGGAGAAAGCCTCCTTTGCGGTGTCCATTATTGGGATCGTCTTC
TTCCTGATCTCAATTCTTCTTCAAGTCCTCTACGCCCGATATCACAAGCACGAGAAGCGCTTTGGCCCCTCCCCC
GCAAACGGCTACACCTCCGGCACTACCCGGGGCTTCGCTTTCTGGAGAAGAAACAAGAACAACCCCGACACTGCT
AGTGCTGATGACATGCTGCCTTCGCATCCATTGCCCAGGGATGTGGAGCTTGGTGCGAACGGCACAACGGCAGCA
GAGAAGGAAGATGGCTTGAATGGTACCAATGTCGGCGCTACTACCGGCAGTGGTGGATATATGCCGTGGAGAAGC
AATGTGAATGGTGGTACTACCACTGCGGGACAGACTGGGACTTACGGATATGGAAATTCGGCATATACGGGGAAT
TATTAA
Gene >Ani_SJS100_1|g23.t1
ATGGGCTTCGGCGGCGTTCTTTTGCGCGCTTCCAACCTCTCCATCCGTGTTCTCCAATTCCTCGCCGCAGCTGTC
ATTCTCGGCATCTTTTCCTACTTTCTTGCTGTCCTTTCTCGACATGACCAGGATATCCCGCGCTGGATGAAAGCC
GTCGAGGGTCTGTCCGGCGCTGCGACCCTCTATGGCATCCTCGGTATCCTATTCACTTGCTGCCTTGGCGGCGTC
GCCTTCTTCGCCTTCCTCGCCATTGTCCTCGATGTCTGCTTCATCGGTGCCATGGTCGCCATTGCTATCATGACC
CGTCATGGCACGCAAAGCTGCTCTGGTCGCGTGACCACCCCTCTCGGGTCTGGTAATAGCAGTGATGACTCACCG
TCAGGGACAAGCTATGGCTACGCCTGCGAACTGGAGAAAGCCTCCTTTGCGGTGTCCATTATTGGGATGTAGGTT
CCTTCCTTCACCTACCCAGACCCTTCCTTCCTTGGCCGATCTTAAGGGCAACTAATGTAAAACTTTATGTGATGC
TAACAGCCCGTGTACAGCGTCTTCTTCCTGATCTCAATTCTTCTTCAAGTCCTCTACGCCCGATATCACAAGCAC
GAGAAGCGCTTTGGCCCCTCCCCCGCAAACGGCTACACCTCCGGCACTACCCGGGGCTTCGCTTTCTGGAGAAGA
AACAAGAACAACCCCGACACTGCTAGTGCTGATGACATGCTGCCTTCGCATCCATTGCCCAGGGATGTGGAGCTT
GGTGCGAACGGCACAACGGCAGCAGAGAAGGAAGATGGCTTGAATGGTACCAATGTCGGCGCTACTACCGGCAGT
GGTGGATATATGCCGTGGAGAAGCAATGTGAATGGTGGTACTACCACTGCGGGACAGACTGGGACTTACGGATAT
GGAAATTCGGCATATACGGGGAATTATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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