Protein ID | Ani_SJS100_1|g2268.t1 |
Gene name | |
Location | scaffold_009:218898..220432 |
Strand | + |
Gene length (bp) | 1534 |
Transcript length (bp) | 1458 |
Coding sequence length (bp) | 1458 |
Protein length (aa) | 486 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03972 | MmgE_PrpD | MmgE/PrpD N-terminal domain | 1.9E-72 | 19 | 266 |
PF19305 | MmgE_PrpD_C | MmgE/PrpD C-terminal domain | 1.1E-32 | 293 | 463 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 64 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2268.t1 MTTLTPTPANSTSTPITHTLSTWLEDLTPESIPVEVRERAKYLILDGLACALLGARLPWSVKAHDAITTIEGQGK CTVIGWNETLSPNAAALLNSTFLQGFDLDDIHVEAPIHTMSVILPAILAAAEQEHGGSTRPISGNDFITATVAGC ETGPRVGYALGGTHMLTIGWHCGAIFGPAASAAAVSKLLNLPAAQIEDALGMACTQACGLMSAQFESMVKRMQHG FASRSGVLATYLAKQGFTGIKEIFDREYGGFLKMFSYGAETERKYYPEEVCKGLGEVWQTKKIKQKLHALCAVSH CTVDCIKDLQAMYPAKMGEWKKIVKIEAEMARAAMKKGGWAPEKPATATAAQMSIPYAVALQVLDGEIVPGQFAP GMLNREELWDVIRLVECREAKELDNTWAQRVKITFEDGEVVEKLLKAPKGVHPGVTNEEVLQKWRAVTKGVISEE RQKKIEEIVLNLEEVEDVAGVLGELLREETVNVLQ* |
Coding | >Ani_SJS100_1|g2268.t1 ATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACTCCCATAACCCACACTCTCTCCACCTGGTTGGAA GACCTCACTCCGGAGTCTATTCCCGTCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGATTAGCCTGT GCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCATGATGCTATCACTACCATTGAGGGTCAGGGAAAA TGTACCGTTATCGGATGGAATGAGACCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTCCTCCAAGGC TTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACACCATGTCCGTCATCCTCCCAGCGATCCTCGCAGCT GCAGAGCAGGAGCATGGCGGCTCGACTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTCGCTGGCTGC GAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCACATGCTCACCATTGGATGGCATTGCGGTGCCATC TTCGGTCCTGCTGCCTCCGCAGCAGCCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAAGATGCACTG GGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGCGCAGTTTGAGAGCATGGTGAAGCGCATGCAGCATGGG TTTGCATCGCGGAGCGGAGTACTCGCCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAGATCTTTGAT CGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGCGGAGACGGAGCGCAAGTATTACCCGGAGGAGGTC TGCAAGGGATTAGGGGAAGTGTGGCAGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCGGTGTCGCAT TGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCCTGCGAAGATGGGTGAGTGGAAGAAAATCGTCAAG ATTGAGGCGGAGATGGCGAGGGCCGCGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACCGCCACGGCG GCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCTGGATGGGGAGATTGTGCCGGGGCAGTTTGCGCCG GGCATGTTGAATCGGGAGGAGTTATGGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAGCTGGATAAT ACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGAGGTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGGA GTCCATCCTGGGGTGACGAATGAGGAGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATTTCGGAAGAG AGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGAGGTGGAGGATGTGGCTGGTGTTTTGGGCGAGTTG TTGAGGGAAGAGACGGTGAATGTGCTGCAGTAG |
Transcript | >Ani_SJS100_1|g2268.t1 ATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACTCCCATAACCCACACTCTCTCCACCTGGTTGGAA GACCTCACTCCGGAGTCTATTCCCGTCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGATTAGCCTGT GCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCATGATGCTATCACTACCATTGAGGGTCAGGGAAAA TGTACCGTTATCGGATGGAATGAGACCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTCCTCCAAGGC TTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACACCATGTCCGTCATCCTCCCAGCGATCCTCGCAGCT GCAGAGCAGGAGCATGGCGGCTCGACTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTCGCTGGCTGC GAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCACATGCTCACCATTGGATGGCATTGCGGTGCCATC TTCGGTCCTGCTGCCTCCGCAGCAGCCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAAGATGCACTG GGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGCGCAGTTTGAGAGCATGGTGAAGCGCATGCAGCATGGG TTTGCATCGCGGAGCGGAGTACTCGCCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAGATCTTTGAT CGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGCGGAGACGGAGCGCAAGTATTACCCGGAGGAGGTC TGCAAGGGATTAGGGGAAGTGTGGCAGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCGGTGTCGCAT TGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCCTGCGAAGATGGGTGAGTGGAAGAAAATCGTCAAG ATTGAGGCGGAGATGGCGAGGGCCGCGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACCGCCACGGCG GCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCTGGATGGGGAGATTGTGCCGGGGCAGTTTGCGCCG GGCATGTTGAATCGGGAGGAGTTATGGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAGCTGGATAAT ACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGAGGTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGGA GTCCATCCTGGGGTGACGAATGAGGAGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATTTCGGAAGAG AGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGAGGTGGAGGATGTGGCTGGTGTTTTGGGCGAGTTG TTGAGGGAAGAGACGGTGAATGTGCTGCAGTAG |
Gene | >Ani_SJS100_1|g2268.t1 ATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACTCCCATAACCCACACTCTCTCCACCTGGTTGGAA GACCTCACTCCGGAGTCTATTCCCGTCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGATTAGCCTGT GCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCATGATGCTATCACTACCATTGAGGGTCAGGGAAAA TGTACCGTTATCGGATGGAATGAGGTATTCCATTCCCTTCTGATCAAACTTCCCTTCCCAAACAGATGAGTAAAG GACAAGAAACTAATGAGACTGATAGACCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTCCTCCAAGG CTTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACACCATGTCCGTCATCCTCCCAGCGATCCTCGCAGC TGCAGAGCAGGAGCATGGCGGCTCGACTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTCGCTGGCTG CGAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCACATGCTCACCATTGGATGGCATTGCGGTGCCAT CTTCGGTCCTGCTGCCTCCGCAGCAGCCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAAGATGCACT GGGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGCGCAGTTTGAGAGCATGGTGAAGCGCATGCAGCATGG GTTTGCATCGCGGAGCGGAGTACTCGCCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAGATCTTTGA TCGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGCGGAGACGGAGCGCAAGTATTACCCGGAGGAGGT CTGCAAGGGATTAGGGGAAGTGTGGCAGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCGGTGTCGCA TTGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCCTGCGAAGATGGGTGAGTGGAAGAAAATCGTCAA GATTGAGGCGGAGATGGCGAGGGCCGCGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACCGCCACGGC GGCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCTGGATGGGGAGATTGTGCCGGGGCAGTTTGCGCC GGGCATGTTGAATCGGGAGGAGTTATGGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAGCTGGATAA TACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGAGGTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGG AGTCCATCCTGGGGTGACGAATGAGGAGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATTTCGGAAGA GAGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGAGGTGGAGGATGTGGCTGGTGTTTTGGGCGAGTT GTTGAGGGAAGAGACGGTGAATGTGCTGCAGTAG |