Protein ID | Ani_SJS100_1|g2266.t1 |
Gene name | |
Location | scaffold_009:213952..215451 |
Strand | - |
Gene length (bp) | 1499 |
Transcript length (bp) | 1428 |
Coding sequence length (bp) | 1428 |
Protein length (aa) | 476 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03972 | MmgE_PrpD | MmgE/PrpD N-terminal domain | 7.4E-67 | 15 | 264 |
PF19305 | MmgE_PrpD_C | MmgE/PrpD C-terminal domain | 2.7E-41 | 284 | 456 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 58 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2266.t1 MSSTSDRQYDETITRLVEYVYHYEVTSDLAILRARYALMDALGCALETLQQSPECRALIGPYTPGLVAPYGFKLP GTCHQLDPVKGAFDMATLIRFLDHNDAYPGAEWGHPSDNLGAILAVTDWLSRTGATSQPLTVRTVLIAMIKAYEI QGCYQIRNAFNKVGLDHTLLVKIASTAVVAWLMGLTEKQAAVALSHAWADGHPLRIFRQSPNAGPRKGWAAGDAA MRAVHLCLLARAGQPGIPSALTEPEWGFLAVSFGGKELQLPRPFKTRVMEEVFFKLITAEGHGISAVQAAMALAE TMASRGIDPATEISRIDIRTHEAAVRIIDKQGPLTNAADRDHCMRYMVSVVLLKNAIIEAEDYHDSSVWAHDPRV EALRQRIHMAEDPQFTYGYHHKKAAASGLTVFLTNGEQLDEVVVEYPIGHPMHEDTLPKVRAKFERNMQGLFTAE ETSRVIDAIHQDKLPVHRLVDLLGR* |
Coding | >Ani_SJS100_1|g2266.t1 ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAAGTG ACCAGCGACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTGCCG GGCACCTGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTC AGCCGTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATT CAAGGCTGCTACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCC ACAGCTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGAT GGCCACCCTCTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCC ATGCGTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAA TGGGGGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAG GAAGTTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAG ACCATGGCCAGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTA CGCATCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTG GTGTTGTTGAAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTT GAGGCCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCC GCCAGCGGACTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCAT CCGATGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAG GAGACAAGCCGGGTGATCGACGCGATCCATCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGA TGA |
Transcript | >Ani_SJS100_1|g2266.t1 ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAAGTG ACCAGCGACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTGCCG GGCACCTGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTC AGCCGTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATT CAAGGCTGCTACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCC ACAGCTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGAT GGCCACCCTCTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCC ATGCGTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAA TGGGGGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAG GAAGTTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAG ACCATGGCCAGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTA CGCATCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTG GTGTTGTTGAAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTT GAGGCCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCC GCCAGCGGACTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCAT CCGATGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAG GAGACAAGCCGGGTGATCGACGCGATCCATCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGA TGA |
Gene | >Ani_SJS100_1|g2266.t1 ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAAGTG ACCAGCGACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTGCCG GGCACCTGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGGTATGCCCGTCTGCGGGATCTACGCTCCCAGAAGCTTG GTTGAATATAGGGCTAACCGATCGACAAAACAGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCC GTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATTCAAG GCTGCTACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAG CTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGATGGCC ACCCTCTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGC GTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAATGGG GGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAG TTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAGACCA TGGCCAGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCA TCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTGGTGT TGTTGAAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGG CCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCCGCCA GCGGACTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGA TGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAGGAGA CAAGCCGGGTGATCGACGCGATCCATCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGATGA |