© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g2264.t1 |
| Gene name | |
| Location | scaffold_009:206620..208284 |
| Strand | - |
| Gene length (bp) | 1664 |
| Transcript length (bp) | 1440 |
| Coding sequence length (bp) | 1440 |
| Protein length (aa) | 480 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08288 | PIGA | PIGA (GPI anchor biosynthesis) | 7.5E-47 | 42 | 131 |
| PF13439 | Glyco_transf_4 | Glycosyltransferase Family 4 | 1.1E-27 | 17 | 180 |
| PF00534 | Glycos_transf_1 | Glycosyl transferases group 1 | 2.4E-26 | 201 | 333 |
| PF13692 | Glyco_trans_1_4 | Glycosyl transferases group 1 | 6.4E-24 | 204 | 331 |
| PF13579 | Glyco_trans_4_4 | Glycosyl transferase 4-like domain | 1.8E-11 | 17 | 178 |
| PF13477 | Glyco_trans_4_2 | Glycosyl transferase 4-like | 2.0E-05 | 21 | 154 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | Yes |
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0046467 | membrane lipid biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0046486 | glycerolipid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0016740 | transferase activity | No |
| GO:0006497 | protein lipidation | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0006505 | GPI anchor metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0046474 | glycerophospholipid biosynthetic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0006661 | phosphatidylinositol biosynthetic process | No |
| GO:1903509 | liposaccharide metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0009247 | glycolipid biosynthetic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006650 | glycerophospholipid metabolic process | No |
| GO:0008654 | phospholipid biosynthetic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006664 | glycolipid metabolic process | No |
| GO:0045017 | glycerolipid biosynthetic process | No |
| GO:0046488 | phosphatidylinositol metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 417 | 439 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GT4 | 3.0E-35 | 203 | 336 |
| Orthofinder run ID | 3 |
| Orthogroup | 2522 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2264.t1 MTYNIAMVSDFFFPQPGGIESHIYQLSTKLIDRGHKVIIITHAYKGRTGVRYLTNGLKVYHVPFFVIYRESTMPT VFSFFPIFRNIVIREQIQIVHGHASLSSFCHEAILHARTMGLRTVFTDHSLFGFADAASILTNKLLKFILSDVDH VICVSHTCKENTVLRASLDPLMVSVIPNAVVAENFRPPEPRPIARLMEPNDIITIVVISRLFYNKGTDLLIAAIP RILASHPNVRFIIAGSGPKAIDLEQMLERNVLQDKVELLGSVRHEEVRDVMIRGHIYLHPSLTEAFGTVLVEAAS CGLYVVCTRVGGIPEVLPQHMTTFAKPEEDDIVLATGKAIAALRSNKVRTDRFHDQVKMMYSWTDVAERTERVYQ GISGDISPEEFYGYYPGQGWEAGRDRVRSFALIDRLKRYYGCGVWAGKLFCLCVVIDFLLYVFLEMWFPRANIDI ARSWPKKINRKENKRPGSTYKGDRLGPAS* |
| Coding | >Ani_SJS100_1|g2264.t1 ATGACATACAACATTGCTATGGTCAGTGACTTTTTCTTTCCCCAACCAGGCGGGATTGAAAGTCACATCTATCAG CTATCGACCAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATGCCTACAAGGGACGCACTGGCGTT CGCTATCTCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGACG GTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGT TTGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCATTCG CTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCAT GTTATTTGTGTCAGCCATACATGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTT ATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAAT GATATTATCACGATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCT CGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAG ATGCTAGAAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTG ATGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGC TGTGGTCTCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCG AAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACG GATCGGTTCCATGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATACCAA GGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGAT CGGGTGCGAAGCTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTT TGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATT GCGCGCAGCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTG GGACCTGCATCTTGA |
| Transcript | >Ani_SJS100_1|g2264.t1 ATGACATACAACATTGCTATGGTCAGTGACTTTTTCTTTCCCCAACCAGGCGGGATTGAAAGTCACATCTATCAG CTATCGACCAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATGCCTACAAGGGACGCACTGGCGTT CGCTATCTCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGACG GTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGT TTGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCATTCG CTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCAT GTTATTTGTGTCAGCCATACATGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTT ATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAAT GATATTATCACGATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCT CGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAG ATGCTAGAAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTG ATGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGC TGTGGTCTCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCG AAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACG GATCGGTTCCATGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATACCAA GGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGAT CGGGTGCGAAGCTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTT TGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATT GCGCGCAGCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTG GGACCTGCATCTTGA |
| Gene | >Ani_SJS100_1|g2264.t1 ATGACATACAACATTGCGTGAGTGCCTGCTTGCGTTCTGAACAATCAATCAATCAAGGTTGGCCTACTAATCAAC GGCCCACAGTATGGTCAGTGACTTTTTCTTTCCCCAACCAGGTCAGTCGTTCTGTCTCATTCTCTTGTCTCTCCG ACGACCAGCTACTGATGGTCCCAGGCGGGATTGAAAGTCACATCTATCAGCTATCGACCGTAAGATTGCTAGACC TCTCGCTCGAGCCAACGCTTATCGCTCTATAGAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACCCATG CCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCT ACCGGGAGTCGACCATGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAAATTC AAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCC GTACGGTTTTCACCGACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTCAAGT TCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCATACATGGTACGTCAACTACATGGATTATACTGAAA GCATACTAACTTTAAGGGCTAGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTTA TTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATG ATATTATCACGATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCTC GGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGA TGCTAGAAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTGA TGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCT GTGGTCTCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCGA AACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGG ATCGGTTCCATGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATACCAAG GCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATC GGGTGCGAAGCTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTTT GCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTG CGCGCAGCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTGG GACCTGCATCTTGA |