© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2254.t1 |
| Gene name | |
| Location | scaffold_009:190565..192038 |
| Strand | - |
| Gene length (bp) | 1473 |
| Transcript length (bp) | 1473 |
| Coding sequence length (bp) | 1473 |
| Protein length (aa) | 491 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00534 | Glycos_transf_1 | Glycosyl transferases group 1 | 8.5E-35 | 220 | 386 |
| PF13692 | Glyco_trans_1_4 | Glycosyl transferases group 1 | 5.4E-26 | 230 | 356 |
| PF13579 | Glyco_trans_4_4 | Glycosyl transferase 4-like domain | 1.8E-09 | 31 | 202 |
| PF13439 | Glyco_transf_4 | Glycosyltransferase Family 4 | 8.1E-08 | 30 | 208 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 439 | 461 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GT4 | 1.3E-36 | 223 | 378 |
| Orthofinder run ID | 3 |
| Orthogroup | 2512 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2254.t1 MPPFIPPSEDFPSILKGKRILLTTESLGPVNGVSRTTGKLIEYLRRNGVELAVVAPQFTSSPSQQQDTIDTTIRL PGYPLPYNPDLTLVYPYNLTTTIYPQTFSPDLIYIASPASLGFQLLLQLRQLHSPPPTLLNYQTDLSSYSSIIFP KPLSTFAVWLLSLVEGYLFRTPCIHTIFYPCSDVLTYLKSTNTPIRKTHRLGRGVDTSLFNPSRRSQSLRDTLAP NGEAILLTVCRIAPEKGFEFLAEAVTHLLSSTKIPFKLVIVGGNANPAVTSRIQSLFHHISSHVIFLGFRTGEEL ASIYASADIFLHCSITETFGLVVLEAMASGLPVIARDQGGPSDIVRNQETGYLVSVAEGEVGVFSGLVGEMLRDG RLRGRLGKGARLFAEDMTWEKINRRVVGRMADAIVERGNGEGDEERALLGGNRGEVSFGERVRLGVAVAVVYVMW MVAVVPLIVHGSRIVPRMVRRVPLLGRWVGRSTSAAAVYT* |
| Coding | >Ani_SJS100_1|g2254.t1 ATGCCACCATTCATTCCCCCCTCGGAGGACTTCCCCAGCATCCTTAAAGGCAAACGAATTCTCCTCACCACTGAA TCCCTTGGTCCAGTCAACGGCGTCAGTCGCACAACCGGCAAACTAATCGAGTATTTGCGTCGCAATGGCGTCGAA TTGGCCGTCGTGGCACCACAATTCACCTCCTCACCATCACAACAACAAGACACAATAGACACCACAATCCGCCTC CCCGGCTACCCCCTCCCCTACAATCCGGATCTAACCCTCGTCTACCCCTACAACCTCACCACCACAATCTACCCC CAAACCTTCTCCCCCGACCTAATCTACATCGCCAGCCCAGCCAGTCTGGGCTTCCAACTCCTCCTACAACTCCGC CAACTACACTCTCCTCCACCAACGCTTCTAAACTACCAGACCGACCTGTCCTCCTACAGCTCAATCATCTTCCCC AAGCCCCTCTCCACCTTCGCCGTCTGGCTCCTCTCCCTTGTGGAAGGCTATCTCTTCCGCACTCCTTGCATCCAC ACAATCTTCTACCCGTGCAGTGATGTCCTAACCTACTTGAAATCCACCAATACTCCTATACGCAAAACCCATCGA TTAGGGAGAGGAGTCGATACGTCTCTCTTTAATCCATCCCGCCGGTCTCAGTCCTTACGGGATACGTTAGCTCCA AACGGCGAAGCTATCCTGCTAACAGTTTGTCGGATCGCGCCTGAGAAGGGGTTTGAGTTCCTCGCTGAGGCTGTC ACACACCTTCTCTCTAGTACTAAAATCCCCTTCAAGCTGGTAATAGTCGGCGGGAACGCCAACCCCGCCGTGACA TCACGCATTCAGTCCCTCTTCCACCACATCTCCTCACACGTCATCTTCCTTGGCTTCAGAACCGGCGAAGAGTTA GCGAGCATCTACGCCTCAGCGGACATATTCCTGCACTGCTCTATCACAGAGACGTTCGGGCTGGTCGTGCTGGAG GCTATGGCGAGCGGGTTGCCAGTCATCGCAAGGGATCAAGGTGGTCCGTCGGATATTGTGAGGAATCAGGAGACG GGGTACTTGGTTTCGGTGGCGGAGGGGGAAGTGGGCGTGTTTAGTGGGCTTGTGGGGGAGATGTTGAGGGATGGG AGGTTGAGGGGGCGTTTGGGGAAAGGGGCGAGGTTGTTTGCGGAGGATATGACCTGGGAGAAGATTAATCGGAGG GTGGTGGGGAGGATGGCGGATGCGATTGTGGAGAGGGGAAATGGGGAAGGGGACGAGGAGAGGGCGTTGTTGGGT GGGAATAGAGGGGAGGTGTCGTTTGGAGAGAGGGTCAGGTTGGGGGTTGCTGTTGCGGTGGTGTATGTGATGTGG ATGGTGGCTGTTGTGCCGTTGATTGTGCATGGGTCGAGAATTGTGCCCAGGATGGTGCGGAGGGTGCCGCTGTTG GGAAGGTGGGTTGGTCGGAGTACTTCTGCTGCCGCTGTTTATACGTAG |
| Transcript | >Ani_SJS100_1|g2254.t1 ATGCCACCATTCATTCCCCCCTCGGAGGACTTCCCCAGCATCCTTAAAGGCAAACGAATTCTCCTCACCACTGAA TCCCTTGGTCCAGTCAACGGCGTCAGTCGCACAACCGGCAAACTAATCGAGTATTTGCGTCGCAATGGCGTCGAA TTGGCCGTCGTGGCACCACAATTCACCTCCTCACCATCACAACAACAAGACACAATAGACACCACAATCCGCCTC CCCGGCTACCCCCTCCCCTACAATCCGGATCTAACCCTCGTCTACCCCTACAACCTCACCACCACAATCTACCCC CAAACCTTCTCCCCCGACCTAATCTACATCGCCAGCCCAGCCAGTCTGGGCTTCCAACTCCTCCTACAACTCCGC CAACTACACTCTCCTCCACCAACGCTTCTAAACTACCAGACCGACCTGTCCTCCTACAGCTCAATCATCTTCCCC AAGCCCCTCTCCACCTTCGCCGTCTGGCTCCTCTCCCTTGTGGAAGGCTATCTCTTCCGCACTCCTTGCATCCAC ACAATCTTCTACCCGTGCAGTGATGTCCTAACCTACTTGAAATCCACCAATACTCCTATACGCAAAACCCATCGA TTAGGGAGAGGAGTCGATACGTCTCTCTTTAATCCATCCCGCCGGTCTCAGTCCTTACGGGATACGTTAGCTCCA AACGGCGAAGCTATCCTGCTAACAGTTTGTCGGATCGCGCCTGAGAAGGGGTTTGAGTTCCTCGCTGAGGCTGTC ACACACCTTCTCTCTAGTACTAAAATCCCCTTCAAGCTGGTAATAGTCGGCGGGAACGCCAACCCCGCCGTGACA TCACGCATTCAGTCCCTCTTCCACCACATCTCCTCACACGTCATCTTCCTTGGCTTCAGAACCGGCGAAGAGTTA GCGAGCATCTACGCCTCAGCGGACATATTCCTGCACTGCTCTATCACAGAGACGTTCGGGCTGGTCGTGCTGGAG GCTATGGCGAGCGGGTTGCCAGTCATCGCAAGGGATCAAGGTGGTCCGTCGGATATTGTGAGGAATCAGGAGACG GGGTACTTGGTTTCGGTGGCGGAGGGGGAAGTGGGCGTGTTTAGTGGGCTTGTGGGGGAGATGTTGAGGGATGGG AGGTTGAGGGGGCGTTTGGGGAAAGGGGCGAGGTTGTTTGCGGAGGATATGACCTGGGAGAAGATTAATCGGAGG GTGGTGGGGAGGATGGCGGATGCGATTGTGGAGAGGGGAAATGGGGAAGGGGACGAGGAGAGGGCGTTGTTGGGT GGGAATAGAGGGGAGGTGTCGTTTGGAGAGAGGGTCAGGTTGGGGGTTGCTGTTGCGGTGGTGTATGTGATGTGG ATGGTGGCTGTTGTGCCGTTGATTGTGCATGGGTCGAGAATTGTGCCCAGGATGGTGCGGAGGGTGCCGCTGTTG GGAAGGTGGGTTGGTCGGAGTACTTCTGCTGCCGCTGTTTATACGTAG |
| Gene | >Ani_SJS100_1|g2254.t1 ATGCCACCATTCATTCCCCCCTCGGAGGACTTCCCCAGCATCCTTAAAGGCAAACGAATTCTCCTCACCACTGAA TCCCTTGGTCCAGTCAACGGCGTCAGTCGCACAACCGGCAAACTAATCGAGTATTTGCGTCGCAATGGCGTCGAA TTGGCCGTCGTGGCACCACAATTCACCTCCTCACCATCACAACAACAAGACACAATAGACACCACAATCCGCCTC CCCGGCTACCCCCTCCCCTACAATCCGGATCTAACCCTCGTCTACCCCTACAACCTCACCACCACAATCTACCCC CAAACCTTCTCCCCCGACCTAATCTACATCGCCAGCCCAGCCAGTCTGGGCTTCCAACTCCTCCTACAACTCCGC CAACTACACTCTCCTCCACCAACGCTTCTAAACTACCAGACCGACCTGTCCTCCTACAGCTCAATCATCTTCCCC AAGCCCCTCTCCACCTTCGCCGTCTGGCTCCTCTCCCTTGTGGAAGGCTATCTCTTCCGCACTCCTTGCATCCAC ACAATCTTCTACCCGTGCAGTGATGTCCTAACCTACTTGAAATCCACCAATACTCCTATACGCAAAACCCATCGA TTAGGGAGAGGAGTCGATACGTCTCTCTTTAATCCATCCCGCCGGTCTCAGTCCTTACGGGATACGTTAGCTCCA AACGGCGAAGCTATCCTGCTAACAGTTTGTCGGATCGCGCCTGAGAAGGGGTTTGAGTTCCTCGCTGAGGCTGTC ACACACCTTCTCTCTAGTACTAAAATCCCCTTCAAGCTGGTAATAGTCGGCGGGAACGCCAACCCCGCCGTGACA TCACGCATTCAGTCCCTCTTCCACCACATCTCCTCACACGTCATCTTCCTTGGCTTCAGAACCGGCGAAGAGTTA GCGAGCATCTACGCCTCAGCGGACATATTCCTGCACTGCTCTATCACAGAGACGTTCGGGCTGGTCGTGCTGGAG GCTATGGCGAGCGGGTTGCCAGTCATCGCAAGGGATCAAGGTGGTCCGTCGGATATTGTGAGGAATCAGGAGACG GGGTACTTGGTTTCGGTGGCGGAGGGGGAAGTGGGCGTGTTTAGTGGGCTTGTGGGGGAGATGTTGAGGGATGGG AGGTTGAGGGGGCGTTTGGGGAAAGGGGCGAGGTTGTTTGCGGAGGATATGACCTGGGAGAAGATTAATCGGAGG GTGGTGGGGAGGATGGCGGATGCGATTGTGGAGAGGGGAAATGGGGAAGGGGACGAGGAGAGGGCGTTGTTGGGT GGGAATAGAGGGGAGGTGTCGTTTGGAGAGAGGGTCAGGTTGGGGGTTGCTGTTGCGGTGGTGTATGTGATGTGG ATGGTGGCTGTTGTGCCGTTGATTGTGCATGGGTCGAGAATTGTGCCCAGGATGGTGCGGAGGGTGCCGCTGTTG GGAAGGTGGGTTGGTCGGAGTACTTCTGCTGCCGCTGTTTATACGTAG |