Protein ID | Ani_SJS100_1|g2253.t1 |
Gene name | |
Location | scaffold_009:189014..190412 |
Strand | + |
Gene length (bp) | 1398 |
Transcript length (bp) | 1269 |
Coding sequence length (bp) | 1269 |
Protein length (aa) | 423 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00487 | FA_desaturase | Fatty acid desaturase | 4.7E-13 | 130 | 350 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006629 | lipid metabolic process | Yes |
GO:0008150 | biological_process | No |
GO:0044238 | primary metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
Orthofinder run ID | 3 |
Orthogroup | 2511 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2253.t1 MDPSTFIDPYLTPPDRLVLDNLLLDSQSTPEKPKSSGGTPVPSDADATVSQLEAFNDPRHADFVPTIFFTWDLKD IKLPPLLDAWLLQPYIKAARSIVRVDTDVVMLTHLLLYFTTSVPSAIYLFRNFHWVHGVLHWIMQSYYVGTYTLM MHQHIHMGGILNKRHCWLFDTLFPYITDPLMGHTWNSYFYHHVKHHHVEGNGPDDLSSTIRYQRDSLADFACYVG RFYLFIWLELPTYFLRKGKTLLGLKAAFWELSSYLMMYLLWNYVSWRATLFVFVLPFLQLRVGLMVGNWGQHAFV DETDPNSDFRSSITLIDVASNRFCYNDGYHTSHHLNPRRHWRDHPVAFLRQKDRYAAEHALVFRNIDYIMITVRL MRKDYDHLARCLVPMGDQIGMTHAELAAMLRRKTRRFSEEEIKRKFS* |
Coding | >Ani_SJS100_1|g2253.t1 ATGGACCCTTCCACCTTTATCGATCCCTATCTGACCCCGCCCGATCGACTGGTCCTCGATAACCTGCTGCTCGAT AGCCAATCCACCCCGGAAAAGCCCAAATCATCCGGTGGAACACCCGTCCCATCAGATGCCGACGCGACCGTCAGC CAACTGGAGGCCTTCAATGACCCCCGGCATGCCGACTTTGTCCCTACCATCTTCTTTACCTGGGATCTGAAGGAC ATCAAGCTGCCTCCGCTACTGGATGCATGGCTGCTGCAACCGTATATCAAGGCCGCGCGGTCCATCGTCCGGGTG GACACCGACGTGGTCATGCTCACGCATCTCTTGCTGTACTTTACCACCTCTGTGCCTAGTGCCATCTATCTCTTC CGTAACTTCCACTGGGTCCATGGCGTGCTGCACTGGATCATGCAGTCCTACTATGTGGGCACTTATACCCTGATG ATGCATCAACACATCCACATGGGCGGCATCCTGAATAAGCGTCACTGCTGGCTCTTTGACACCCTGTTCCCCTAC ATCACTGATCCGCTAATGGGCCACACCTGGAACTCCTACTTCTACCATCACGTCAAGCATCACCATGTCGAAGGC AACGGACCGGATGATTTGTCTTCAACAATCCGCTACCAGCGTGACAGTCTCGCCGATTTCGCCTGCTACGTCGGC CGCTTTTACCTCTTCATCTGGCTGGAGCTGCCCACGTACTTCCTGCGCAAGGGAAAGACTCTGTTGGGCCTGAAA GCAGCCTTTTGGGAACTCAGCAGCTATCTGATGATGTATCTACTTTGGAACTACGTCAGCTGGAGAGCGACGCTG TTTGTCTTTGTTCTCCCGTTCCTGCAGCTGCGCGTGGGTCTCATGGTGGGGAACTGGGGACAGCATGCGTTTGTC GACGAGACGGATCCCAACAGCGACTTTCGTTCCAGCATCACCTTGATTGATGTAGCGAGCAACCGCTTCTGCTAC AATGACGGCTATCACACCTCGCACCATCTGAACCCGCGCCGCCACTGGCGCGACCACCCTGTGGCCTTCCTGCGG CAAAAGGACCGGTATGCGGCCGAGCATGCCCTCGTGTTCCGCAACATCGACTACATCATGATCACAGTGCGACTG ATGCGCAAGGACTACGACCACCTGGCGCGGTGTCTCGTGCCGATGGGCGACCAGATCGGCATGACGCACGCGGAG CTTGCGGCGATGCTGCGTCGCAAGACGCGTCGTTTCAGCGAGGAGGAAATCAAGCGGAAGTTTAGCTGA |
Transcript | >Ani_SJS100_1|g2253.t1 ATGGACCCTTCCACCTTTATCGATCCCTATCTGACCCCGCCCGATCGACTGGTCCTCGATAACCTGCTGCTCGAT AGCCAATCCACCCCGGAAAAGCCCAAATCATCCGGTGGAACACCCGTCCCATCAGATGCCGACGCGACCGTCAGC CAACTGGAGGCCTTCAATGACCCCCGGCATGCCGACTTTGTCCCTACCATCTTCTTTACCTGGGATCTGAAGGAC ATCAAGCTGCCTCCGCTACTGGATGCATGGCTGCTGCAACCGTATATCAAGGCCGCGCGGTCCATCGTCCGGGTG GACACCGACGTGGTCATGCTCACGCATCTCTTGCTGTACTTTACCACCTCTGTGCCTAGTGCCATCTATCTCTTC CGTAACTTCCACTGGGTCCATGGCGTGCTGCACTGGATCATGCAGTCCTACTATGTGGGCACTTATACCCTGATG ATGCATCAACACATCCACATGGGCGGCATCCTGAATAAGCGTCACTGCTGGCTCTTTGACACCCTGTTCCCCTAC ATCACTGATCCGCTAATGGGCCACACCTGGAACTCCTACTTCTACCATCACGTCAAGCATCACCATGTCGAAGGC AACGGACCGGATGATTTGTCTTCAACAATCCGCTACCAGCGTGACAGTCTCGCCGATTTCGCCTGCTACGTCGGC CGCTTTTACCTCTTCATCTGGCTGGAGCTGCCCACGTACTTCCTGCGCAAGGGAAAGACTCTGTTGGGCCTGAAA GCAGCCTTTTGGGAACTCAGCAGCTATCTGATGATGTATCTACTTTGGAACTACGTCAGCTGGAGAGCGACGCTG TTTGTCTTTGTTCTCCCGTTCCTGCAGCTGCGCGTGGGTCTCATGGTGGGGAACTGGGGACAGCATGCGTTTGTC GACGAGACGGATCCCAACAGCGACTTTCGTTCCAGCATCACCTTGATTGATGTAGCGAGCAACCGCTTCTGCTAC AATGACGGCTATCACACCTCGCACCATCTGAACCCGCGCCGCCACTGGCGCGACCACCCTGTGGCCTTCCTGCGG CAAAAGGACCGGTATGCGGCCGAGCATGCCCTCGTGTTCCGCAACATCGACTACATCATGATCACAGTGCGACTG ATGCGCAAGGACTACGACCACCTGGCGCGGTGTCTCGTGCCGATGGGCGACCAGATCGGCATGACGCACGCGGAG CTTGCGGCGATGCTGCGTCGCAAGACGCGTCGTTTCAGCGAGGAGGAAATCAAGCGGAAGTTTAGCTGA |
Gene | >Ani_SJS100_1|g2253.t1 ATGGACCCTTCCACCTTTATCGATCCCTATCTGACCCCGCCCGATCGACTGGTCCTCGATAACCTGCTGCTCGAT AGCCAATCCACCCCGGAAAAGCCCAAATCATGTACATTCTCACCCGCCGTCAACTAACTTCCTTGCCACTGCTCT TCCGGGTTTCATGCTAACTTTCTCCTGCCACTAAAGCCGGTGGAACACCCGTCCCATCAGATGCCGACGCGACCG TCAGCCAACTGGAGGCCTTCAATGACCCCCGGCATGCCGACTTTGTCCCTACCATCTTCTTTACCTGGGATCTGA AGGACATCAAGCTGCCTCCGCTACTGGATGCATGGCTGCTGCAACCGTATATCAAGGCCGCGCGGTCCATCGTCC GGGTGGACACCGACGTGGTCATGCTCACGCATCTCTTGCTGTACTTTACCACCTCTGTGCCTAGTGCCATCTATC TCTTCCGTAACTTCCACTGGGTCCATGGCGTGCTGCACTGGATCATGCAGTCCTACTATGTGGGCACTTATACCC TGATGATGCATCAACACATCCACATGGGCGGCATCCTGAATAAGCGTCACTGCTGGCTCTTTGACACCCTGTTCC CCTACATCACTGATCCGCTAATGGGCCACACCTGGAACTCCTACTTCTACCATCACGTCAAGCATCACCATGTCG AAGGCAACGGACCGGATGATTTGTCTTCAACAATCCGCTACCAGCGTGACAGTCTCGCCGATTTCGCCTGCTACG TCGGCCGCTTTTACCTCTTCATCTGGCTGGAGCTGCCCACGTACTTCCTGCGCAAGGGAAAGACTCTGTTGGGCC TGAAAGCAGCCTTTTGGGAACTCAGCAGCTATCTGATGATGTATCTACTTTGGAACTACGTCAGCTGGAGAGCGA CGCTGTTTGTCTTTGTTCTCCCGTTCCTGCAGCTGCGCGTGGGTCTCATGGTGGGGAACTGGGGACAGCATGCGT TTGTCGACGAGACGGATCCCAACAGCGACTTTCGTTCCAGCATCACCTTGATTGATGTAGCGGTATGGCCCAATT ATTCTTCGGTTCTGACTACGTACTCACAATGATTAGAGCAACCGCTTCTGCTACAATGACGGCTATCACACCTCG CACCATCTGAACCCGCGCCGCCACTGGCGCGACCACCCTGTGGCCTTCCTGCGGCAAAAGGACCGGTATGCGGCC GAGCATGCCCTCGTGTTCCGCAACATCGACTACATCATGATCACAGTGCGACTGATGCGCAAGGACTACGACCAC CTGGCGCGGTGTCTCGTGCCGATGGGCGACCAGATCGGCATGACGCACGCGGAGCTTGCGGCGATGCTGCGTCGC AAGACGCGTCGTTTCAGCGAGGAGGAAATCAAGCGGAAGTTTAGCTGA |