© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g2226.t1 |
| Gene name | |
| Location | scaffold_009:114477..115417 |
| Strand | - |
| Gene length (bp) | 940 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01822 | WSC | WSC domain | 9.4E-15 | 26 | 102 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 187 | 209 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2226.t1 MRSALAASALLLSISLPATHAYTEEYNGCYSDSTPLKDQGTYTYQSDGYCQKLCLKDNYSVFALHNGQDCLCGNL LPASSAKVDDSKCNVACAGWPSVECGGSNTYSVYLTGIENDVDHYSASSTSTSTTDSETSTSSTQEAHVVTSSGT TQTVYATSGTEASASATAEGATEASQKKSSSANTAAIAAGVVVGVVGACALAGAGFFLWRFKNRKSQYRRSVGVD NYGNPMSQHSMSDSRFDGDFMAQRRQSNGSIDDDQDFSRRILQVTNPDRR* |
| Coding | >Ani_SJS100_1|g2226.t1 ATGCGGTCGGCTCTCGCTGCCTCAGCCCTTCTCCTGTCCATCAGTCTGCCTGCAACACATGCCTATACCGAGGAA TACAATGGCTGTTACTCCGACTCGACACCACTGAAAGATCAGGGAACATATACATATCAGAGTGATGGGTACTGT CAAAAGCTGTGTTTGAAGGACAACTACTCAGTCTTTGCCCTGCATAACGGACAGGACTGTCTCTGTGGTAACCTG CTACCTGCCTCGTCAGCAAAGGTTGATGACAGCAAGTGTAATGTCGCATGTGCCGGCTGGCCTTCTGTGGAATGT GGTGGCAGCAATACTTATTCCGTCTATCTTACGGGCATTGAGAACGACGTTGACCATTATTCGGCCTCGAGCACA AGTACCTCGACCACCGACAGCGAAACGTCTACATCATCAACCCAAGAAGCCCATGTCGTCACTAGCTCTGGCACC ACGCAAACCGTGTATGCAACGTCCGGAACCGAAGCGAGCGCGTCTGCAACCGCCGAGGGTGCTACTGAAGCGTCA CAGAAGAAGAGCTCGAGTGCCAACACTGCTGCCATTGCGGCGGGCGTCGTCGTGGGTGTAGTGGGAGCCTGTGCT CTTGCTGGCGCTGGCTTCTTCCTGTGGCGCTTCAAGAACCGCAAGTCGCAATACCGTCGTAGTGTTGGTGTGGAC AACTATGGCAACCCGATGTCCCAGCACTCCATGTCGGATTCCCGTTTCGATGGGGACTTTATGGCCCAGCGCCGT CAGAGCAATGGCAGCATCGATGACGATCAAGACTTCTCTCGTCGCATCCTGCAGGTGACCAACCCCGATCGACGC TAG |
| Transcript | >Ani_SJS100_1|g2226.t1 ATGCGGTCGGCTCTCGCTGCCTCAGCCCTTCTCCTGTCCATCAGTCTGCCTGCAACACATGCCTATACCGAGGAA TACAATGGCTGTTACTCCGACTCGACACCACTGAAAGATCAGGGAACATATACATATCAGAGTGATGGGTACTGT CAAAAGCTGTGTTTGAAGGACAACTACTCAGTCTTTGCCCTGCATAACGGACAGGACTGTCTCTGTGGTAACCTG CTACCTGCCTCGTCAGCAAAGGTTGATGACAGCAAGTGTAATGTCGCATGTGCCGGCTGGCCTTCTGTGGAATGT GGTGGCAGCAATACTTATTCCGTCTATCTTACGGGCATTGAGAACGACGTTGACCATTATTCGGCCTCGAGCACA AGTACCTCGACCACCGACAGCGAAACGTCTACATCATCAACCCAAGAAGCCCATGTCGTCACTAGCTCTGGCACC ACGCAAACCGTGTATGCAACGTCCGGAACCGAAGCGAGCGCGTCTGCAACCGCCGAGGGTGCTACTGAAGCGTCA CAGAAGAAGAGCTCGAGTGCCAACACTGCTGCCATTGCGGCGGGCGTCGTCGTGGGTGTAGTGGGAGCCTGTGCT CTTGCTGGCGCTGGCTTCTTCCTGTGGCGCTTCAAGAACCGCAAGTCGCAATACCGTCGTAGTGTTGGTGTGGAC AACTATGGCAACCCGATGTCCCAGCACTCCATGTCGGATTCCCGTTTCGATGGGGACTTTATGGCCCAGCGCCGT CAGAGCAATGGCAGCATCGATGACGATCAAGACTTCTCTCGTCGCATCCTGCAGGTGACCAACCCCGATCGACGC TAG |
| Gene | >Ani_SJS100_1|g2226.t1 ATGCGGTCGGCTCTCGCTGCCTCAGCCCTTCTCCTGTCCATCAGTCTGCCTGCAACACATGCCTATACCGAGGAA TACAATGGCTGTTACTCCGACTCGACACCACTGAAAGATCAGGGAACATATACATATCAGAGTGATGGGTACTGT CAAAAGCTGTGTTTGAAGGACAACTACTCAGTCTTTGCCCTGCATAACGGACAGGACTGTCTCTGTGGTAACCTG CTACCTGCCTCGTCAGCAAAGGTTGATGACAGCAAGTGTAATGTCGCATGTGCCGGCTGGCCTTCTGTGGAATGT ATGTTCTCCTGGTATGAATCTTCTGTGGCGCGTTTGCTGACGGTGACAACATAGGTGGTGGCAGCAATACTTATT CCGTCTATCTTACGGGCATTGAGAACGACGTTGACCATTATTCGGCCTCGAGCACAAGTACCTCGACCACCGACA GCGAAACGTCTACATCATCAACCCAAGAAGCCCATGTCGTCACTAGCTCTGGCACCACGCAAACCGTGTATGCAA CGTCCGGAACCGAAGCGAGCGCGTCTGCAACCGCCGAGGGTGCTACTGAAGCGTCACAGAAGAAGAGCTCGAGTG CCAACACTGCTGCCATTGCGGCGGGCGTCGTCGTGGGTGTAGTGGGAGCCTGTGCTCTTGCTGGCGCTGGCTTCT TCCTGTGGCGCTTCAAGAACCGCAAGTCGCAATACCGTCGTAGTGTTGGTGTGGACAACTATGGCAACCCGATGT CCCAGCACTCCATGTCGGATTCCCGTTTCGATGGGGACTTTATGGCCCAGCGCCGTCAGAGCAATGGCAGCATCG ATGACGATCAAGACTTCTCTCGTCGCATCCTGCAGGTGAGCTTAGCTGAACGATGAATGAGGATAGAGGACTTGA GCTAACGAAGTACTAGGTGACCAACCCCGATCGACGCTAG |