© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2190.t1 |
| Gene name | |
| Location | scaffold_008:599858..600982 |
| Strand | - |
| Gene length (bp) | 1124 |
| Transcript length (bp) | 891 |
| Coding sequence length (bp) | 891 |
| Protein length (aa) | 297 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00153 | Mito_carr | Mitochondrial carrier protein | 2.6E-19 | 16 | 105 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 3.5E-15 | 110 | 200 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 3.4E-14 | 208 | 289 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 204 | 226 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2190.t1 MATLASSTKPQKQYTPQWVSLIAGGVAGGVEAASTYPFEYAKTRVQLLRTSKSTPSNPLRLIFTVAQQEGIGALY TGCSTLIIGTTAKAAVRFVSYDTIKNSLSDERGSLSPARGIVAGVVAGATESVLAVTPTERIKTALIDDAKNARQ FRSSLHATQVLVRTHGLRELYRGLVSTTLKQSATSAVRMGTYNILKESFKAHDIPPTLFTIFCMGALAGVVTVYA TQPFDTIKTRAQGVQGAGLVEAIRNIQSDYGVRGFWKGSSMRLGRLLLSGGIVFSVYEKMTYLLHPSARVE* |
| Coding | >Ani_SJS100_1|g2190.t1 ATGGCTACCCTTGCCTCCTCAACAAAACCGCAAAAGCAATACACTCCGCAGTGGGTCTCTCTGATAGCCGGCGGA GTGGCTGGGGGCGTGGAAGCTGCGTCCACGTACCCGTTTGAATATGCAAAGACCCGCGTACAACTTTTGAGAACC AGCAAATCGACCCCCTCCAACCCGCTGCGACTCATCTTTACCGTTGCACAACAAGAAGGCATCGGTGCTTTGTAT ACCGGATGTTCCACGCTGATCATTGGAACGACGGCCAAGGCGGCCGTGCGATTTGTTTCATACGACACTATTAAA AACTCCCTCTCTGATGAGCGTGGATCGCTCTCCCCAGCACGAGGCATTGTGGCCGGCGTCGTCGCAGGGGCTACT GAAAGCGTCCTGGCCGTGACGCCTACAGAAAGAATCAAAACAGCATTGATCGACGATGCTAAAAACGCCAGGCAA TTCCGATCGAGTCTGCACGCCACGCAGGTTTTAGTAAGAACCCACGGTTTGCGCGAGCTGTACCGGGGTCTTGTG TCCACCACGCTGAAACAGTCAGCCACATCGGCTGTAAGAATGGGCACGTACAATATCCTCAAGGAGTCCTTCAAG GCACACGACATTCCGCCGACTCTTTTCACTATCTTTTGCATGGGTGCCCTGGCGGGAGTTGTCACGGTGTACGCG ACACAGCCTTTTGACACGATCAAAACGCGGGCGCAAGGAGTCCAGGGGGCAGGGCTGGTCGAGGCCATCCGTAAC ATACAGAGTGACTATGGAGTTCGGGGGTTCTGGAAGGGTAGTTCAATGCGACTGGGCAGGCTGCTCTTGAGTGGC GGAATTGTCTTTTCGGTGTACGAGAAAATGACGTATCTGCTGCATCCGAGTGCTCGGGTTGAATGA |
| Transcript | >Ani_SJS100_1|g2190.t1 ATGGCTACCCTTGCCTCCTCAACAAAACCGCAAAAGCAATACACTCCGCAGTGGGTCTCTCTGATAGCCGGCGGA GTGGCTGGGGGCGTGGAAGCTGCGTCCACGTACCCGTTTGAATATGCAAAGACCCGCGTACAACTTTTGAGAACC AGCAAATCGACCCCCTCCAACCCGCTGCGACTCATCTTTACCGTTGCACAACAAGAAGGCATCGGTGCTTTGTAT ACCGGATGTTCCACGCTGATCATTGGAACGACGGCCAAGGCGGCCGTGCGATTTGTTTCATACGACACTATTAAA AACTCCCTCTCTGATGAGCGTGGATCGCTCTCCCCAGCACGAGGCATTGTGGCCGGCGTCGTCGCAGGGGCTACT GAAAGCGTCCTGGCCGTGACGCCTACAGAAAGAATCAAAACAGCATTGATCGACGATGCTAAAAACGCCAGGCAA TTCCGATCGAGTCTGCACGCCACGCAGGTTTTAGTAAGAACCCACGGTTTGCGCGAGCTGTACCGGGGTCTTGTG TCCACCACGCTGAAACAGTCAGCCACATCGGCTGTAAGAATGGGCACGTACAATATCCTCAAGGAGTCCTTCAAG GCACACGACATTCCGCCGACTCTTTTCACTATCTTTTGCATGGGTGCCCTGGCGGGAGTTGTCACGGTGTACGCG ACACAGCCTTTTGACACGATCAAAACGCGGGCGCAAGGAGTCCAGGGGGCAGGGCTGGTCGAGGCCATCCGTAAC ATACAGAGTGACTATGGAGTTCGGGGGTTCTGGAAGGGTAGTTCAATGCGACTGGGCAGGCTGCTCTTGAGTGGC GGAATTGTCTTTTCGGTGTACGAGAAAATGACGTATCTGCTGCATCCGAGTGCTCGGGTTGAATGA |
| Gene | >Ani_SJS100_1|g2190.t1 ATGGCTACCCTTGCCTCCTCAACAAAACCGCAAAAGGTCGGCTCTCCTCCCTTCAACGACTGGGAAGGGCGTTAG ACGGTTAACTGGTTCGCAGCAATACACTCCGCAGTGGGTCTCTCTGATAGCCGGCGGAGTGGCTGGGGGCGTGGA AGCTGCGTCCACGGTAAGTACTATTAATTTCTTTGGCCTTGCAGCATGTCAGATTCCAGGACTGAGAAAATGATG ACTAGTACCCGTTTGAATATGCAAAGACCCGCGTACAACTTTTGAGAACCAGCAAATCGACCCCCTCCAACCCGC TGCGACTCATCTTTACCGTTGCACAACAAGAAGGCATCGGTGCTTTGTATACCGGATGTTCCACGCTGATCATTG TGCGTACTGAATCAATCATATGGCTAAGGGTTAGGGTCTAATCGCTCGCAGGGAACGACGGCCAAGGCGGCCGTG CGATTTGTTTCATACGACACTATTAAAAACTCCCTCTCTGATGAGCGTGGATCGCTCTCCCCAGCACGAGGCATT GTGGCCGGCGTCGTCGCAGGGGCTACTGAAAGCGTCCTGGCCGTGACGCCTACAGAAAGAATCAAAACAGCATTG TTTGTGCCTTGTTTTCCATACAACCTCCGAAGGCCTTTCTAACTGATTGATAAAGGATCGACGATGCTAAAAACG CCAGGCAATTCCGATCGAGTCTGCACGCCACGCAGGTTTTAGTAAGAACCCACGGTTTGCGCGAGCTGTACCGGG GTCTTGTGTCCACCACGCTGAAACAGTCAGCCACATCGGCTGTAAGAATGGGCACGTACAATATCCTCAAGGAGT CCTTCAAGGCACACGACATTCCGCCGACTCTTTTCACTATCTTTTGCATGGGTGCCCTGGCGGGAGTTGTCACGG TGTACGCGACACAGCCTTTTGACACGATCAAAACGCGGGCGCAAGGAGTCCAGGGGGCAGGGCTGGTCGAGGCCA TCCGTAACATACAGAGTGACTATGGAGTTCGGGGGTTCTGGAAGGGTAGTTCAATGCGACTGGGCAGGCTGCTCT TGAGTGGCGGAATTGTCTTTTCGGTGTACGAGAAAATGACGTATCTGCTGCATCCGAGTGCTCGGGTTGAATGA |