© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2186.t1 |
| Gene name | |
| Location | scaffold_008:587575..589449 |
| Strand | + |
| Gene length (bp) | 1874 |
| Transcript length (bp) | 1650 |
| Coding sequence length (bp) | 1650 |
| Protein length (aa) | 550 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 4.5E-117 | 45 | 494 |
| PF13520 | AA_permease_2 | Amino acid permease | 8.7E-36 | 40 | 454 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 67 | 22 |
| 2 | 74 | 96 | 22 |
| 3 | 153 | 175 | 22 |
| 4 | 182 | 204 | 22 |
| 5 | 219 | 241 | 22 |
| 6 | 267 | 289 | 22 |
| 7 | 322 | 344 | 22 |
| 8 | 364 | 383 | 19 |
| 9 | 393 | 415 | 22 |
| 10 | 436 | 455 | 19 |
| 11 | 470 | 487 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2186.t1 MSVLDAEKLQRGSTSRPEPAAIPMDGDLENIRPNRLARKLSPRQVQMIAIGGTIGTGLYLGTGQALATGGPASIL LAYTICGGIVFITMLSLGEMVAFMPVAGSFCTFSGRFVDDALGFALTWNYWANDAVSTASDIVALQVLLEYWTKH FPGWGLSLMCLVLVLVLNVCSVRVFGEIEYWLSLLKVVTIIVFIIVGIAVNCGANTDRTYLGAKYFYTGDAPFVG GIGGFASVFVTASFAYGGTENVAVTAGETRNPARTYPRVIRNVFWRILMFYVVSIIIIGLDIPYNYPGLSTESAL TSPFTIVFEKAGSTMAGSFINAVIMTSGISAANHALFAGSRLLYTLAITGHAPGSRFLGDLNRFNVPWMSVLATA AISALCFGASKIGAGQVWSWLQNLVGVSNQISWLFICLTSLRFRSAVRLQNLEHLLPFRNVTYPWGPALAVGLNL FLVLIQGWKSFSPTFDAAEFVSYYIEIPIMCSLFLVWKLCKKTKLVPLGEIDLTTDRYEREEDAHDISLHGSEGS PDNDRLSCVTRMLAFLKEVRNWVL* |
| Coding | >Ani_SJS100_1|g2186.t1 ATGTCAGTTTTGGACGCCGAAAAGCTGCAACGCGGCAGCACGTCGAGACCGGAGCCCGCAGCTATTCCTATGGAT GGAGATTTAGAGAATATCAGACCTAATCGACTCGCGCGAAAACTGTCCCCTAGACAAGTTCAGATGATTGCCATT GGTGGTACTATTGGAACAGGGTTATACTTGGGAACAGGCCAGGCCCTAGCAACTGGGGGACCCGCGTCGATACTA TTGGCATATACCATTTGCGGTGGCATTGTCTTCATTACAATGCTCTCTCTGGGAGAGATGGTGGCATTTATGCCT GTTGCAGGCTCGTTTTGTACCTTTTCAGGGCGTTTCGTGGATGATGCTCTTGGATTCGCGTTAACGTGGAATTAC TGGGCGAATGACGCTGTCTCCACAGCTTCAGACATTGTAGCACTGCAGGTCTTGCTGGAATACTGGACGAAACAT TTCCCCGGCTGGGGCCTAAGCCTTATGTGTCTTGTGCTTGTTCTGGTCTTGAATGTCTGCTCTGTTAGGGTCTTT GGAGAGATTGAATACTGGTTGTCTTTGCTCAAAGTTGTGACCATCATTGTCTTCATCATTGTCGGAATTGCTGTG AATTGTGGCGCTAATACTGATCGAACATACTTGGGTGCTAAATACTTCTACACTGGGGACGCGCCCTTTGTCGGT GGGATCGGAGGCTTCGCCTCTGTTTTTGTGACAGCTTCCTTTGCATATGGCGGAACCGAAAATGTGGCTGTTACA GCTGGCGAGACACGAAACCCCGCTCGGACCTATCCCCGTGTCATTCGCAATGTCTTCTGGCGCATTTTGATGTTC TACGTGGTATCTATCATCATCATAGGCCTTGATATTCCTTACAACTACCCTGGCCTATCCACAGAGAGTGCTTTG ACCAGTCCTTTCACCATTGTCTTCGAGAAAGCCGGCAGTACCATGGCGGGCAGTTTTATAAATGCTGTAATCATG ACAAGTGGAATTTCAGCGGCCAATCATGCCCTCTTCGCCGGCTCGCGCCTTCTTTACACCCTTGCCATCACGGGC CACGCCCCAGGTTCTCGTTTCTTGGGCGACCTGAACCGATTCAATGTCCCGTGGATGTCAGTACTTGCCACCGCA GCCATCAGTGCCCTCTGCTTCGGGGCAAGTAAGATCGGTGCTGGTCAGGTCTGGTCATGGCTGCAGAACCTAGTG GGGGTGTCAAACCAGATTTCCTGGCTCTTCATCTGCCTGACTTCGCTGCGATTCCGGTCTGCCGTCCGACTGCAG AACCTTGAGCATCTGCTCCCGTTCAGGAATGTCACGTATCCGTGGGGCCCGGCGCTCGCTGTCGGATTGAACCTC TTTTTGGTTCTCATCCAGGGCTGGAAGTCCTTTAGCCCAACATTCGATGCCGCTGAGTTTGTATCATACTATATT GAGATCCCAATCATGTGCTCCTTGTTCTTGGTTTGGAAGCTTTGCAAGAAAACCAAGCTTGTTCCTCTCGGTGAG ATTGACTTGACAACAGACCGATACGAACGGGAGGAAGATGCTCATGATATTAGCTTACATGGCTCCGAGGGTTCT CCAGACAATGACCGGCTAAGCTGTGTAACAAGGATGTTAGCGTTTCTCAAAGAGGTGAGGAATTGGGTGCTTTAA |
| Transcript | >Ani_SJS100_1|g2186.t1 ATGTCAGTTTTGGACGCCGAAAAGCTGCAACGCGGCAGCACGTCGAGACCGGAGCCCGCAGCTATTCCTATGGAT GGAGATTTAGAGAATATCAGACCTAATCGACTCGCGCGAAAACTGTCCCCTAGACAAGTTCAGATGATTGCCATT GGTGGTACTATTGGAACAGGGTTATACTTGGGAACAGGCCAGGCCCTAGCAACTGGGGGACCCGCGTCGATACTA TTGGCATATACCATTTGCGGTGGCATTGTCTTCATTACAATGCTCTCTCTGGGAGAGATGGTGGCATTTATGCCT GTTGCAGGCTCGTTTTGTACCTTTTCAGGGCGTTTCGTGGATGATGCTCTTGGATTCGCGTTAACGTGGAATTAC TGGGCGAATGACGCTGTCTCCACAGCTTCAGACATTGTAGCACTGCAGGTCTTGCTGGAATACTGGACGAAACAT TTCCCCGGCTGGGGCCTAAGCCTTATGTGTCTTGTGCTTGTTCTGGTCTTGAATGTCTGCTCTGTTAGGGTCTTT GGAGAGATTGAATACTGGTTGTCTTTGCTCAAAGTTGTGACCATCATTGTCTTCATCATTGTCGGAATTGCTGTG AATTGTGGCGCTAATACTGATCGAACATACTTGGGTGCTAAATACTTCTACACTGGGGACGCGCCCTTTGTCGGT GGGATCGGAGGCTTCGCCTCTGTTTTTGTGACAGCTTCCTTTGCATATGGCGGAACCGAAAATGTGGCTGTTACA GCTGGCGAGACACGAAACCCCGCTCGGACCTATCCCCGTGTCATTCGCAATGTCTTCTGGCGCATTTTGATGTTC TACGTGGTATCTATCATCATCATAGGCCTTGATATTCCTTACAACTACCCTGGCCTATCCACAGAGAGTGCTTTG ACCAGTCCTTTCACCATTGTCTTCGAGAAAGCCGGCAGTACCATGGCGGGCAGTTTTATAAATGCTGTAATCATG ACAAGTGGAATTTCAGCGGCCAATCATGCCCTCTTCGCCGGCTCGCGCCTTCTTTACACCCTTGCCATCACGGGC CACGCCCCAGGTTCTCGTTTCTTGGGCGACCTGAACCGATTCAATGTCCCGTGGATGTCAGTACTTGCCACCGCA GCCATCAGTGCCCTCTGCTTCGGGGCAAGTAAGATCGGTGCTGGTCAGGTCTGGTCATGGCTGCAGAACCTAGTG GGGGTGTCAAACCAGATTTCCTGGCTCTTCATCTGCCTGACTTCGCTGCGATTCCGGTCTGCCGTCCGACTGCAG AACCTTGAGCATCTGCTCCCGTTCAGGAATGTCACGTATCCGTGGGGCCCGGCGCTCGCTGTCGGATTGAACCTC TTTTTGGTTCTCATCCAGGGCTGGAAGTCCTTTAGCCCAACATTCGATGCCGCTGAGTTTGTATCATACTATATT GAGATCCCAATCATGTGCTCCTTGTTCTTGGTTTGGAAGCTTTGCAAGAAAACCAAGCTTGTTCCTCTCGGTGAG ATTGACTTGACAACAGACCGATACGAACGGGAGGAAGATGCTCATGATATTAGCTTACATGGCTCCGAGGGTTCT CCAGACAATGACCGGCTAAGCTGTGTAACAAGGATGTTAGCGTTTCTCAAAGAGGTGAGGAATTGGGTGCTTTAA |
| Gene | >Ani_SJS100_1|g2186.t1 ATGTCAGTTTTGGACGCCGAAAAGCTGCAACGCGGCAGCACGTCGAGACCGGAGCCCGCAGCTATTCCTATGGAT GGAGATTTAGAGAATATCAGACCTAATCGACTCGCGCGAAAACTGTCCCCTAGACAAGTTCAGATGATTGCCATT GGTGGTACTATTGGAACAGGGTTATACTTGGGAACAGGCCAGGCCCTAGCAACTGGGGGACCCGCGTCGATACTA TTGGCATATACCATTTGCGGTGGCATTGTCTTCATTACAATGCTCTCTCTGGGAGAGATGGTGGCATTTATGCCT GTTGCAGGCTCGTTTTGTACCTTTTCAGGGTATGCTGGGCTTGATCAAAGCGTGATTAGCGGTTTTCGTGCTGAC CTTAACAAGGCGTTTCGTGGATGATGCTCTTGGATTCGCGTTAACGTGGAATTACTGGGCGAATGACGCTGTCTC CACAGCTTCAGACATTGTAGCACTGCAGGTCTTGCTGGAATACTGGACGAAACATTTCCCCGGCTGGGGCCTAAG CCTTATGTGTCTTGTGCTTGTTCTGGTCTTGAATGTCTGCTCTGTTAGGGTCTTTGGAGAGGTATTTTGGTCGTA AGAAAGCCTTAAATGTGATGTTATATTAACACTTCCTCTAGATTGAATACTGGTTGTCTTTGCTCAAAGTTGTGA CCATCATTGTATGTGCACATACCCAGATTCATTTCCATGGCACCAAGCTCATGTATTTCAGGTCTTCATCATTGT CGGAATTGCTGTGAATTGTGGCGCTAATACTGATCGAACATACTTGGGTGCTAAATACTTCTACACTGGGGACGC GCCCTTTGTCGGTGGGATCGGAGGCTTCGCCTCTGTTTTTGTGACAGCTTCCTTTGCATAGTAATCCTCACTTGT ATGGCCGAAGCACATCTGGACTATGATCGCTGATCGTACAACATAGTGGCGGAACCGAAAATGTGGCTGTTACAG CTGGCGAGACACGAAACCCCGCTCGGACCTATCCCCGTGTCATTCGCAATGTCTTCTGGCGCATTTTGATGTTCT ACGTGGTATCTATCATCATCATAGGCCTTGATATTCCTTACAACTACCCTGGCCTATCCACAGAGAGTGCTTTGA CCAGTCCTTTCACCATTGTCTTCGAGAAAGCCGGCAGTACCATGGCGGGCAGTTTTATAAATGCTGTAATCATGA CAAGTGGAATTTCAGCGGCCAATCATGCCCTCTTCGCCGGCTCGCGCCTTCTTTACACCCTTGCCATCACGGGCC ACGCCCCAGGTTCTCGTTTCTTGGGCGACCTGAACCGATTCAATGTCCCGTGGATGTCAGTACTTGCCACCGCAG CCATCAGTGCCCTCTGCTTCGGGGCAAGTAAGATCGGTGCTGGTCAGGTCTGGTCATGGCTGCAGAACCTAGTGG GGGTGTCAAACCAGATTTCCTGGCTCTTCATCTGCCTGACTTCGCTGCGATTCCGGTCTGCCGTCCGACTGCAGA ACCTTGAGCATCTGCTCCCGTTCAGGAATGTCACGTATCCGTGGGGCCCGGCGCTCGCTGTCGGATTGAACCTCT TTTTGGTTCTCATCCAGGGCTGGAAGTCCTTTAGCCCAACATTCGATGCCGCTGAGTTTGTATCATACTATATTG AGATCCCAATCATGTGCTCCTTGTTCTTGGTTTGGAAGCTTTGCAAGAAAACCAAGCTTGTTCCTCTCGGTGAGA TTGACTTGACAACAGACCGATACGAACGGGAGGAAGATGCTCATGATATTAGCTTACATGGCTCCGAGGGTTCTC CAGACAATGACCGGCTAAGCTGTGTAACAAGGATGTTAGCGTTTCTCAAAGAGGTGAGGAATTGGGTGCTTTAA |