Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2184.t1
Gene name
Locationscaffold_008:581741..583123
Strand+
Gene length (bp)1382
Transcript length (bp)1302
Coding sequence length (bp)1302
Protein length (aa) 434

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17111 Helo_like_N Fungal N-terminal domain of STAND proteins 1.1E-82 2 210
PF17111 Helo_like_N Fungal N-terminal domain of STAND proteins 2.0E-06 241 306

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2184.t1
MAEPIGLASGILALATFAFHGTVSLYETVNSFRSHPKRVRDLLEELGALRAVLAPLIELVESNSDANLSALDLPL
FRCGNACKEFQQELVRCASRSSNNRASFRDWARLTYMGDDIDDFRNLLAGYKATINIALTDATLRKSAVAVESIE
NYEALIQDAKEDLGARLENIDRKLEQLAEKDGTLSDPDAAELHSLKEERRSTEKCLQICAQLSNHIDQIQLLSDD
RSSAGGSEMGDSSPETVTNKGLQECKRSLIATTAKLEKHMQEIMDQLLAKSKNRISCDEDAQVLSRLRDEWEAAR
QCLDICSHADSHFKESVSNIENHGTGDALQFMVSANGKVLHGKNRGLGWRSRQVGGYMSNGTIQQLSRDLTVQHP
ISLRGDEPPSKTSFMSDASDVAEGQTTPEFKERYGRGFTLRPTLKPETNTTFRSMSRE*
Coding >Ani_SJS100_1|g2184.t1
ATGGCGGAACCCATCGGACTCGCTTCTGGAATACTTGCCTTGGCAACTTTCGCATTTCATGGCACGGTTTCGCTT
TATGAGACGGTGAACAGTTTTCGTTCACATCCAAAGCGTGTGCGCGACCTTCTCGAAGAGCTCGGAGCTTTGAGG
GCTGTGTTGGCGCCCCTAATTGAGCTAGTTGAATCGAACTCTGATGCGAACCTCTCAGCCCTAGATCTGCCGTTA
TTTCGGTGCGGGAATGCTTGCAAGGAGTTTCAGCAGGAGTTGGTTCGGTGCGCGTCACGATCGAGCAATAATCGA
GCCAGCTTCCGTGACTGGGCGAGACTCACGTACATGGGTGATGATATCGATGATTTTCGTAACCTGCTGGCAGGA
TACAAGGCCACAATTAATATTGCTTTGACTGATGCAACTTTGCGCAAATCCGCGGTCGCTGTCGAAAGCATTGAG
AACTACGAGGCTCTGATTCAGGATGCAAAAGAGGATTTGGGAGCTCGACTCGAAAATATAGATCGAAAGTTAGAG
CAGCTGGCTGAGAAGGACGGCACCCTATCCGATCCGGATGCAGCCGAACTGCACTCTCTGAAGGAGGAGCGCCGG
AGTACAGAGAAATGTCTTCAGATTTGCGCCCAGTTGTCAAATCATATCGACCAAATCCAGCTGTTATCCGACGAC
AGGAGTTCAGCTGGAGGATCTGAGATGGGTGATTCGTCGCCTGAGACTGTTACGAACAAAGGCTTACAGGAATGT
AAAAGAAGCCTAATTGCGACAACCGCCAAGTTGGAAAAGCATATGCAGGAGATCATGGATCAGCTTCTTGCTAAA
TCAAAAAATAGGATCTCTTGTGATGAAGATGCCCAAGTGCTATCGCGGCTACGTGATGAATGGGAAGCTGCTCGG
CAGTGTCTGGATATTTGCTCTCATGCGGATAGTCACTTCAAGGAGTCTGTTAGTAATATTGAAAACCATGGCACT
GGGGACGCTCTTCAGTTCATGGTCTCCGCAAATGGGAAGGTTCTCCACGGGAAAAACCGAGGCTTGGGCTGGAGA
AGCAGACAAGTAGGAGGCTATATGAGCAACGGAACAATCCAGCAGCTATCGCGAGATCTCACAGTTCAACATCCT
ATTTCTCTGAGAGGTGACGAGCCACCCTCAAAGACCAGCTTTATGTCAGATGCAAGCGATGTGGCGGAAGGTCAG
ACGACGCCGGAGTTCAAGGAACGGTATGGGCGGGGCTTTACCCTAAGACCAACACTCAAGCCAGAAACAAACACA
ACATTCCGCAGTATGAGCAGGGAGTGA
Transcript >Ani_SJS100_1|g2184.t1
ATGGCGGAACCCATCGGACTCGCTTCTGGAATACTTGCCTTGGCAACTTTCGCATTTCATGGCACGGTTTCGCTT
TATGAGACGGTGAACAGTTTTCGTTCACATCCAAAGCGTGTGCGCGACCTTCTCGAAGAGCTCGGAGCTTTGAGG
GCTGTGTTGGCGCCCCTAATTGAGCTAGTTGAATCGAACTCTGATGCGAACCTCTCAGCCCTAGATCTGCCGTTA
TTTCGGTGCGGGAATGCTTGCAAGGAGTTTCAGCAGGAGTTGGTTCGGTGCGCGTCACGATCGAGCAATAATCGA
GCCAGCTTCCGTGACTGGGCGAGACTCACGTACATGGGTGATGATATCGATGATTTTCGTAACCTGCTGGCAGGA
TACAAGGCCACAATTAATATTGCTTTGACTGATGCAACTTTGCGCAAATCCGCGGTCGCTGTCGAAAGCATTGAG
AACTACGAGGCTCTGATTCAGGATGCAAAAGAGGATTTGGGAGCTCGACTCGAAAATATAGATCGAAAGTTAGAG
CAGCTGGCTGAGAAGGACGGCACCCTATCCGATCCGGATGCAGCCGAACTGCACTCTCTGAAGGAGGAGCGCCGG
AGTACAGAGAAATGTCTTCAGATTTGCGCCCAGTTGTCAAATCATATCGACCAAATCCAGCTGTTATCCGACGAC
AGGAGTTCAGCTGGAGGATCTGAGATGGGTGATTCGTCGCCTGAGACTGTTACGAACAAAGGCTTACAGGAATGT
AAAAGAAGCCTAATTGCGACAACCGCCAAGTTGGAAAAGCATATGCAGGAGATCATGGATCAGCTTCTTGCTAAA
TCAAAAAATAGGATCTCTTGTGATGAAGATGCCCAAGTGCTATCGCGGCTACGTGATGAATGGGAAGCTGCTCGG
CAGTGTCTGGATATTTGCTCTCATGCGGATAGTCACTTCAAGGAGTCTGTTAGTAATATTGAAAACCATGGCACT
GGGGACGCTCTTCAGTTCATGGTCTCCGCAAATGGGAAGGTTCTCCACGGGAAAAACCGAGGCTTGGGCTGGAGA
AGCAGACAAGTAGGAGGCTATATGAGCAACGGAACAATCCAGCAGCTATCGCGAGATCTCACAGTTCAACATCCT
ATTTCTCTGAGAGGTGACGAGCCACCCTCAAAGACCAGCTTTATGTCAGATGCAAGCGATGTGGCGGAAGGTCAG
ACGACGCCGGAGTTCAAGGAACGGTATGGGCGGGGCTTTACCCTAAGACCAACACTCAAGCCAGAAACAAACACA
ACATTCCGCAGTATGAGCAGGGAGTGA
Gene >Ani_SJS100_1|g2184.t1
ATGGCGGAACCCATCGGACTCGCTTCTGGAATACTTGCCTTGGCAACTTTCGCATTTCATGGCACGGTTTCGCTT
TATGAGACGGTGAACAGTTTTCGTTCACATCCAAAGCGTGTGCGCGACCTTCTCGAAGAGCTCGGAGCTTTGAGG
GCTGTGTTGGCGCCCCTAATTGAGCTAGTTGAATCGAACTCTGATGCGAACCTCTCAGCCCTAGATCTGCCGTTA
TTTCGGTGCGGGAATGCTTGCAAGGAGTTTCAGCAGGAGTTGGTTCGGTGCGCGTCACGATCGAGCAATAATCGA
GCCAGCTTCCGTGACTGGGCGAGACTCACGTACATGGGTGATGATATCGATGATTTTCGTAACCTGCTGGCAGGA
TACAAGGCCACAATTAATATTGCTTTGACTGATGCAACTTTGTAAGCATCCAAACCCAACAACATCAGCTTTTCT
TATCAAACTTCTGCTCTTTGGTCATGGTTACTGATCGCCGCACAAGGCGCAAATCCGCGGTCGCTGTCGAAAGCA
TTGAGAACTACGAGGCTCTGATTCAGGATGCAAAAGAGGATTTGGGAGCTCGACTCGAAAATATAGATCGAAAGT
TAGAGCAGCTGGCTGAGAAGGACGGCACCCTATCCGATCCGGATGCAGCCGAACTGCACTCTCTGAAGGAGGAGC
GCCGGAGTACAGAGAAATGTCTTCAGATTTGCGCCCAGTTGTCAAATCATATCGACCAAATCCAGCTGTTATCCG
ACGACAGGAGTTCAGCTGGAGGATCTGAGATGGGTGATTCGTCGCCTGAGACTGTTACGAACAAAGGCTTACAGG
AATGTAAAAGAAGCCTAATTGCGACAACCGCCAAGTTGGAAAAGCATATGCAGGAGATCATGGATCAGCTTCTTG
CTAAATCAAAAAATAGGATCTCTTGTGATGAAGATGCCCAAGTGCTATCGCGGCTACGTGATGAATGGGAAGCTG
CTCGGCAGTGTCTGGATATTTGCTCTCATGCGGATAGTCACTTCAAGGAGTCTGTTAGTAATATTGAAAACCATG
GCACTGGGGACGCTCTTCAGTTCATGGTCTCCGCAAATGGGAAGGTTCTCCACGGGAAAAACCGAGGCTTGGGCT
GGAGAAGCAGACAAGTAGGAGGCTATATGAGCAACGGAACAATCCAGCAGCTATCGCGAGATCTCACAGTTCAAC
ATCCTATTTCTCTGAGAGGTGACGAGCCACCCTCAAAGACCAGCTTTATGTCAGATGCAAGCGATGTGGCGGAAG
GTCAGACGACGCCGGAGTTCAAGGAACGGTATGGGCGGGGCTTTACCCTAAGACCAACACTCAAGCCAGAAACAA
ACACAACATTCCGCAGTATGAGCAGGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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