Protein ID | Ani_SJS100_1|g218.t1 |
Gene name | |
Location | scaffold_001:717530..718958 |
Strand | - |
Gene length (bp) | 1428 |
Transcript length (bp) | 1428 |
Coding sequence length (bp) | 1428 |
Protein length (aa) | 476 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09924 | LPG_synthase_C | Phosphatidylglycerol lysyltransferase, C-terminal | 4.8E-24 | 137 | 439 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 445 | 467 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g218.t1 MTSSSPRKQKKSQQSSTKVLLADTIGQSLYERLLQARLDCPVTHWAPVHHPLAPQPSSTINCNLSINSSSTITSS PSTSTSDFKSIPSSRTSHDSFHKPSSSPIHPPLPSNRIISLAGPITTSLPILTTITHLAAKHSQVSHMSLLDPSY TIFLNTTHTAALCFKVVHQTAIIAGDPISSEENIPSLLSEFKTYRKAHLLGMAFLGASPRLTHYAETQTLTGSKS TNNWTMLHFGTSRVLNPTTNALLNESTGKRLLLQNKQLLNPNKGGITLDIYIPGSNTTLENELQDIYTTWRTTRN TSTTPQAFITEYTSPFSSTLLPSLMTYIYAKDKDGVPLAFAALRYCGANNGYHIDPCVALPTAPKGLTDLLMFAA MALCRHAGVSYLSVGFEPLEELGEVRGLRGPLEHLARGAYRFAFKRLPSIQGKKAYHDKWRTEEGLEERLFLVLT GAGGGLGVVAVTHVANVKIRRVVWG* |
Coding | >Ani_SJS100_1|g218.t1 ATGACTTCATCCAGCCCCCGCAAGCAAAAGAAATCCCAGCAGTCCAGCACCAAGGTGCTGCTGGCCGACACCATC GGACAATCGCTGTACGAGCGTCTCCTGCAAGCCCGACTCGACTGTCCCGTCACCCACTGGGCACCTGTGCACCAT CCTCTCGCTCCTCAGCCCTCGTCTACCATCAACTGTAACCTCAGCATCAACAGCAGCAGCACCATCACCTCGTCC CCATCAACCTCCACCTCCGACTTCAAAAGCATCCCCTCCAGCCGCACCAGCCATGACTCTTTCCACAAACCCTCA TCCTCACCCATCCACCCACCCCTCCCCTCCAACCGCATCATATCCCTCGCCGGACCCATCACCACCTCCCTCCCC ATCCTCACCACCATCACCCACCTAGCCGCCAAGCACAGCCAAGTCTCACACATGTCCCTCCTCGACCCGAGCTAC ACCATCTTCCTAAACACCACGCACACCGCGGCGCTCTGCTTCAAAGTCGTGCACCAAACGGCCATCATAGCCGGC GACCCCATCAGCTCCGAAGAGAACATCCCATCTCTCCTCTCCGAATTCAAAACCTACCGCAAAGCCCACCTCCTC GGCATGGCCTTCCTAGGCGCCAGCCCGCGTCTTACACACTACGCCGAAACCCAGACTTTAACCGGCAGCAAATCC ACCAACAACTGGACAATGCTCCACTTCGGGACCTCACGCGTCCTCAACCCCACCACCAACGCCCTCCTCAACGAA TCAACCGGAAAGCGTCTCCTCTTGCAGAATAAACAACTCCTAAATCCAAACAAAGGCGGCATAACCCTAGACATA TACATCCCTGGCAGCAATACCACATTGGAAAATGAATTACAGGATATCTACACAACCTGGCGCACCACCCGCAAC ACATCCACCACCCCCCAAGCCTTCATCACCGAATACACCTCCCCGTTCTCGTCGACCCTCCTTCCATCCCTGATG ACATATATCTATGCCAAGGATAAAGACGGCGTGCCGCTCGCCTTCGCAGCCCTGCGCTACTGCGGCGCTAACAAC GGATACCATATTGATCCGTGCGTTGCGCTGCCGACAGCTCCCAAGGGACTGACAGACCTGTTGATGTTTGCTGCG ATGGCGCTGTGTCGGCATGCCGGGGTGTCGTATCTGAGTGTTGGGTTTGAGCCGTTAGAGGAGCTGGGTGAGGTG AGGGGGTTGAGGGGCCCGTTGGAGCATCTGGCGAGAGGGGCATATCGCTTTGCGTTCAAGCGCTTGCCGTCCATA CAGGGAAAGAAGGCGTATCATGATAAGTGGAGGACGGAGGAGGGGTTGGAGGAGAGGTTGTTTTTGGTCTTGACC GGGGCCGGAGGCGGGTTGGGGGTCGTGGCTGTTACGCATGTTGCGAATGTGAAGATTAGGAGGGTGGTTTGGGGG TGA |
Transcript | >Ani_SJS100_1|g218.t1 ATGACTTCATCCAGCCCCCGCAAGCAAAAGAAATCCCAGCAGTCCAGCACCAAGGTGCTGCTGGCCGACACCATC GGACAATCGCTGTACGAGCGTCTCCTGCAAGCCCGACTCGACTGTCCCGTCACCCACTGGGCACCTGTGCACCAT CCTCTCGCTCCTCAGCCCTCGTCTACCATCAACTGTAACCTCAGCATCAACAGCAGCAGCACCATCACCTCGTCC CCATCAACCTCCACCTCCGACTTCAAAAGCATCCCCTCCAGCCGCACCAGCCATGACTCTTTCCACAAACCCTCA TCCTCACCCATCCACCCACCCCTCCCCTCCAACCGCATCATATCCCTCGCCGGACCCATCACCACCTCCCTCCCC ATCCTCACCACCATCACCCACCTAGCCGCCAAGCACAGCCAAGTCTCACACATGTCCCTCCTCGACCCGAGCTAC ACCATCTTCCTAAACACCACGCACACCGCGGCGCTCTGCTTCAAAGTCGTGCACCAAACGGCCATCATAGCCGGC GACCCCATCAGCTCCGAAGAGAACATCCCATCTCTCCTCTCCGAATTCAAAACCTACCGCAAAGCCCACCTCCTC GGCATGGCCTTCCTAGGCGCCAGCCCGCGTCTTACACACTACGCCGAAACCCAGACTTTAACCGGCAGCAAATCC ACCAACAACTGGACAATGCTCCACTTCGGGACCTCACGCGTCCTCAACCCCACCACCAACGCCCTCCTCAACGAA TCAACCGGAAAGCGTCTCCTCTTGCAGAATAAACAACTCCTAAATCCAAACAAAGGCGGCATAACCCTAGACATA TACATCCCTGGCAGCAATACCACATTGGAAAATGAATTACAGGATATCTACACAACCTGGCGCACCACCCGCAAC ACATCCACCACCCCCCAAGCCTTCATCACCGAATACACCTCCCCGTTCTCGTCGACCCTCCTTCCATCCCTGATG ACATATATCTATGCCAAGGATAAAGACGGCGTGCCGCTCGCCTTCGCAGCCCTGCGCTACTGCGGCGCTAACAAC GGATACCATATTGATCCGTGCGTTGCGCTGCCGACAGCTCCCAAGGGACTGACAGACCTGTTGATGTTTGCTGCG ATGGCGCTGTGTCGGCATGCCGGGGTGTCGTATCTGAGTGTTGGGTTTGAGCCGTTAGAGGAGCTGGGTGAGGTG AGGGGGTTGAGGGGCCCGTTGGAGCATCTGGCGAGAGGGGCATATCGCTTTGCGTTCAAGCGCTTGCCGTCCATA CAGGGAAAGAAGGCGTATCATGATAAGTGGAGGACGGAGGAGGGGTTGGAGGAGAGGTTGTTTTTGGTCTTGACC GGGGCCGGAGGCGGGTTGGGGGTCGTGGCTGTTACGCATGTTGCGAATGTGAAGATTAGGAGGGTGGTTTGGGGG TGA |
Gene | >Ani_SJS100_1|g218.t1 ATGACTTCATCCAGCCCCCGCAAGCAAAAGAAATCCCAGCAGTCCAGCACCAAGGTGCTGCTGGCCGACACCATC GGACAATCGCTGTACGAGCGTCTCCTGCAAGCCCGACTCGACTGTCCCGTCACCCACTGGGCACCTGTGCACCAT CCTCTCGCTCCTCAGCCCTCGTCTACCATCAACTGTAACCTCAGCATCAACAGCAGCAGCACCATCACCTCGTCC CCATCAACCTCCACCTCCGACTTCAAAAGCATCCCCTCCAGCCGCACCAGCCATGACTCTTTCCACAAACCCTCA TCCTCACCCATCCACCCACCCCTCCCCTCCAACCGCATCATATCCCTCGCCGGACCCATCACCACCTCCCTCCCC ATCCTCACCACCATCACCCACCTAGCCGCCAAGCACAGCCAAGTCTCACACATGTCCCTCCTCGACCCGAGCTAC ACCATCTTCCTAAACACCACGCACACCGCGGCGCTCTGCTTCAAAGTCGTGCACCAAACGGCCATCATAGCCGGC GACCCCATCAGCTCCGAAGAGAACATCCCATCTCTCCTCTCCGAATTCAAAACCTACCGCAAAGCCCACCTCCTC GGCATGGCCTTCCTAGGCGCCAGCCCGCGTCTTACACACTACGCCGAAACCCAGACTTTAACCGGCAGCAAATCC ACCAACAACTGGACAATGCTCCACTTCGGGACCTCACGCGTCCTCAACCCCACCACCAACGCCCTCCTCAACGAA TCAACCGGAAAGCGTCTCCTCTTGCAGAATAAACAACTCCTAAATCCAAACAAAGGCGGCATAACCCTAGACATA TACATCCCTGGCAGCAATACCACATTGGAAAATGAATTACAGGATATCTACACAACCTGGCGCACCACCCGCAAC ACATCCACCACCCCCCAAGCCTTCATCACCGAATACACCTCCCCGTTCTCGTCGACCCTCCTTCCATCCCTGATG ACATATATCTATGCCAAGGATAAAGACGGCGTGCCGCTCGCCTTCGCAGCCCTGCGCTACTGCGGCGCTAACAAC GGATACCATATTGATCCGTGCGTTGCGCTGCCGACAGCTCCCAAGGGACTGACAGACCTGTTGATGTTTGCTGCG ATGGCGCTGTGTCGGCATGCCGGGGTGTCGTATCTGAGTGTTGGGTTTGAGCCGTTAGAGGAGCTGGGTGAGGTG AGGGGGTTGAGGGGCCCGTTGGAGCATCTGGCGAGAGGGGCATATCGCTTTGCGTTCAAGCGCTTGCCGTCCATA CAGGGAAAGAAGGCGTATCATGATAAGTGGAGGACGGAGGAGGGGTTGGAGGAGAGGTTGTTTTTGGTCTTGACC GGGGCCGGAGGCGGGTTGGGGGTCGTGGCTGTTACGCATGTTGCGAATGTGAAGATTAGGAGGGTGGTTTGGGGG TGA |