Protein ID | Ani_SJS100_1|g2169.t1 |
Gene name | |
Location | scaffold_008:535424..537081 |
Strand | - |
Gene length (bp) | 1657 |
Transcript length (bp) | 1407 |
Coding sequence length (bp) | 1407 |
Protein length (aa) | 469 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 1.1E-22 | 48 | 445 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 54 | 72 | 18 |
2 | 76 | 98 | 22 |
3 | 128 | 150 | 22 |
4 | 160 | 182 | 22 |
5 | 189 | 211 | 22 |
6 | 239 | 261 | 22 |
7 | 273 | 295 | 22 |
8 | 315 | 334 | 19 |
9 | 355 | 375 | 20 |
10 | 385 | 407 | 22 |
11 | 428 | 450 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2169.t1 MTAPIYRKEKLEQAPTDVAELASDESTSNEIWNALVTEDHQHEIQLRTMSWQKAAWLLAGDQVCLAIMAQSWSLS VLGWVPGIITMVVSGALFWVTSLTMHKYIMKHPQIRNICDFGYYVFGKSQTAYIFSGFMLLANNILLIGFHILTG AKVLDTLSDHSLCTVTFSAIVMVMGIVLSAPRTLRHVSFMSVFSAACMGLAILLFLIFAGIETAPLDFPTDGPVR TYAFPLPGTSWVDCMNAVLNITFLWVPQILFPTFIAEMEHPEDFPKSLAVLAIISTVLFIVPPAIGFRYLGQYAT APAFGSLGLVKYRKASFGFVIVPTLIIGAIYANVTAKFIYSHLLGTSRHAHSNTVVGWGVWALVMIGIWVLGFIF SEVVPSMGDFLSLLGAAFDSFFGFIFFAVAYWHLYRGKLFAGLGRTSMTLLHAFIMACGLFLLGPGLYAAVEAII TDYSGSVSPAFSCASLGI* |
Coding | >Ani_SJS100_1|g2169.t1 ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAG TCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGACCATCAACATGAGATCCAACTCCGAACCATGTCC TGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCC GTGCTCGGATGGGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATG CACAAGTACATCATGAAGCACCCGCAAATCAGGAACATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAG ACGGCGTACATCTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGA GCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGC ATCGTCCTGTCCGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGGTGTTCTCAGCGGCTTGTATGGGTCTG GCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGA ACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACATCACCTTCCTCTGG GTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTC TTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGGGCCAATACGCCACT GCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTG ATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTTGGGTACCTCCAGACACGCA CACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTT TCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCTTCTTCGGCTTCATC TTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTG CTGCATGCCTTCATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGGTTTGTATGCGGCAGTCGAGGCCATCATC ACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGGAATCTGA |
Transcript | >Ani_SJS100_1|g2169.t1 ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAG TCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGACCATCAACATGAGATCCAACTCCGAACCATGTCC TGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCC GTGCTCGGATGGGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATG CACAAGTACATCATGAAGCACCCGCAAATCAGGAACATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAG ACGGCGTACATCTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGA GCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGC ATCGTCCTGTCCGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGGTGTTCTCAGCGGCTTGTATGGGTCTG GCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGA ACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACATCACCTTCCTCTGG GTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTC TTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGGGCCAATACGCCACT GCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTG ATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTTGGGTACCTCCAGACACGCA CACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTT TCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCTTCTTCGGCTTCATC TTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTG CTGCATGCCTTCATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGGTTTGTATGCGGCAGTCGAGGCCATCATC ACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGGAATCTGA |
Gene | >Ani_SJS100_1|g2169.t1 ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAG TCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGGTAGGCTGCAGCTCAATTCGTCTGTTTGAACCGAG GCTAAGTCGTGGGGATGCCGGGATATAGACCATCAACATGAGATCCAACTCCGAACCATGTCCTGGCAAAAGGCC GCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCGTAAGTCAAGAGC AAAAATGTCCAATGACCACAAAACTGACCATCATTGTCCCTCAGCGTGCTCGGATGGGTGCCCGGCATCATCACC ATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATGCACAAGTACATCATGAAGCACCCGCAAATC AGGAACATTTGTAGGAGCTCCTCTCTTCCCATGTCTCCTGTGATAGGATTCTGAGACTGACTCGAGTTCGTCCCC CCGGACAGGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAGACGGCGTACATCTTTTCCGGCTTCATGTTGCT GGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGAGCCAAGGTGCTTGATACACTGTCCGATCACTC CCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGCATCGTCCTGTCCGCCCCAAGAACCCTGCGTCA TGTCTCCTTCATGTCGGTGTTCTCAGGTAAGTGAACTCATGTCACTGCAATGTTTGCAACCTGTGATTCGCTAAC AATGTCAGCGGCTTGTATGGGTCTGGCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGA CTTTCCGACCGATGGTCCTGTGCGAACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGC CGTGCTGAACATCACCTTCCTCTGGGTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGA GGACTTCCCCAAGTCGTTGGCGGTCTTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTT CCGCTACCTGGGCCAATACGCCACTGCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTT TGGTTTTGTCATCGTGCCTACATTGATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCA CCTGTTGGGTACCTCCAGACACGCACACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGG CATCTGGGTACTGGGATTCATCTTTTCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGC CTTTGACTCCTTCTTCGGCTTCATCTTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGG ACTCGGGCGCACGAGCATGACCCTGCTGCATGCCTTCATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGGTTT GTATGCGGCAGTCGAGGCCATCATCACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGG AATCTGA |