Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g2151.t1
Gene name
Locationscaffold_008:469705..470037
Strand+
Gene length (bp)332
Transcript length (bp)252
Coding sequence length (bp)252
Protein length (aa) 84

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 42 64 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g2151.t1
MESSQVLSLSRRAVAIAMPLWARDDSDSSSGEKPVSNFLKSGVPGIIVGIFFLIAVSVCCYFLYRNKKRDAKEAA
AVRDWNDA*
Coding >Ani_SJS100_1|g2151.t1
ATGGAGTCATCCCAGGTCCTCTCTCTTTCCAGACGCGCAGTCGCCATTGCGATGCCTCTGTGGGCACGCGACGAC
TCGGATTCCTCGTCTGGCGAGAAGCCCGTCAGCAATTTCCTCAAGAGCGGTGTGCCGGGCATCATCGTTGGCATA
TTCTTCCTCATCGCAGTTTCTGTATGCTGCTATTTCCTCTATCGCAACAAAAAGCGAGATGCTAAAGAAGCCGCG
GCGGTACGAGACTGGAATGATGCATGA
Transcript >Ani_SJS100_1|g2151.t1
ATGGAGTCATCCCAGGTCCTCTCTCTTTCCAGACGCGCAGTCGCCATTGCGATGCCTCTGTGGGCACGCGACGAC
TCGGATTCCTCGTCTGGCGAGAAGCCCGTCAGCAATTTCCTCAAGAGCGGTGTGCCGGGCATCATCGTTGGCATA
TTCTTCCTCATCGCAGTTTCTGTATGCTGCTATTTCCTCTATCGCAACAAAAAGCGAGATGCTAAAGAAGCCGCG
GCGGTACGAGACTGGAATGATGCATGA
Gene >Ani_SJS100_1|g2151.t1
ATGGAGTCATCCCAGGTCCTCTCTCTTTCCAGACGCGCAGTCGCCATTGCGATGCCTCTGTGGGCACGCGACGAC
TCGGATTCCTCGTCTGGCGAGAAGCCCGTCAGCAATTTCCTCAAGAGCGGTGTGCCGGGCATCATCGTTGGCATG
TGAGTACTGCGTGGTGGCTTCTTCAAAACCGCGCCTCATGGGAGCCCGCAACCTTGGACAGGCTAACAACGGTCC
CTAGATTCTTCCTCATCGCAGTTTCTGTATGCTGCTATTTCCTCTATCGCAACAAAAAGCGAGATGCTAAAGAAG
CCGCGGCGGTACGAGACTGGAATGATGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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