Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g2141.t1
Gene name
Location	scaffold_008:449273..449879
Strand	+
Gene length (bp)	606
Transcript length (bp)	546
Coding sequence length (bp)	546
Protein length (aa)	182

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00117	GATase	Glutamine amidotransferase class-I	2.0E-07	56	118

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	147	166	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g2141.t1 MAAHSPLRIAVLINTPPGNEFRNDVRGSYRDALNVIAPNAQVDMYDPVFEGSFPNPQNYDLIVLSGGKADASSSE PCVLGVLDFLRRTARESPKTKILGICWGHQAISRAFGGEVRAVPTGPIAGLEDVNLTEAGMKLFSTRSGVKAYVR CLMAALWLFALLMILPKGYRSFMYERWPNLE*
Coding	>Ani_SJS100_1\|g2141.t1 ATGGCTGCCCACTCACCACTACGCATCGCAGTCCTTATCAACACACCCCCTGGCAATGAGTTCCGGAACGATGTC CGCGGGTCTTATCGGGATGCCTTAAATGTTATTGCACCAAACGCCCAGGTCGATATGTACGATCCCGTGTTTGAA GGGAGCTTCCCCAATCCTCAGAATTATGACTTGATCGTCTTGAGTGGAGGGAAAGCCGACGCCTCATCCTCGGAG CCCTGTGTGCTTGGTGTCCTGGACTTCCTCCGTAGGACTGCGCGGGAGTCACCAAAGACTAAGATTTTAGGCATC TGCTGGGGCCACCAAGCTATATCGAGGGCATTTGGTGGAGAAGTGCGAGCCGTTCCTACAGGACCCATTGCCGGC CTTGAAGATGTTAACTTGACTGAAGCTGGAATGAAGCTTTTCTCTACCCGATCAGGTGTCAAGGCCTACGTGCGC TGTTTGATGGCTGCCCTTTGGTTGTTCGCCCTGCTGATGATTCTTCCCAAAGGTTACCGGAGTTTCATGTACGAG AGGTGGCCTAACCTGGAGTAG
Transcript	>Ani_SJS100_1\|g2141.t1 ATGGCTGCCCACTCACCACTACGCATCGCAGTCCTTATCAACACACCCCCTGGCAATGAGTTCCGGAACGATGTC CGCGGGTCTTATCGGGATGCCTTAAATGTTATTGCACCAAACGCCCAGGTCGATATGTACGATCCCGTGTTTGAA GGGAGCTTCCCCAATCCTCAGAATTATGACTTGATCGTCTTGAGTGGAGGGAAAGCCGACGCCTCATCCTCGGAG CCCTGTGTGCTTGGTGTCCTGGACTTCCTCCGTAGGACTGCGCGGGAGTCACCAAAGACTAAGATTTTAGGCATC TGCTGGGGCCACCAAGCTATATCGAGGGCATTTGGTGGAGAAGTGCGAGCCGTTCCTACAGGACCCATTGCCGGC CTTGAAGATGTTAACTTGACTGAAGCTGGAATGAAGCTTTTCTCTACCCGATCAGGTGTCAAGGCCTACGTGCGC TGTTTGATGGCTGCCCTTTGGTTGTTCGCCCTGCTGATGATTCTTCCCAAAGGTTACCGGAGTTTCATGTACGAG AGGTGGCCTAACCTGGAGTAG
Gene	>Ani_SJS100_1\|g2141.t1 ATGGCTGCCCACTCACCACTACGCATCGCAGTCCTTATCAACACACCCCCTGGCAATGAGTTCCGGAACGATGTC CGCGGGTCTTATCGGGATGCCTTAAATGTTATTGCACCAAACGCCCAGGTCGATATGTACGATCCCGTGTTTGAA GGGAGCTTCCCCAATCCTCAGAATTATGACTTGATCGTCTTGAGTGGAGGGAAAGCCGACGCCTCATCCTCGGAG CCCTGTGTGCTTGGTGTCCTGGACTTCCTCCGTAGGACTGCGCGGGAGTCACCAAAGACTAAGATTTTAGGCATC TGCTGGGGCCACCAAGCTATATCGAGGGCATTTGGTGGAGAAGTGCGAGCCGTTCCTACAGGACCCATTGTAGGT GTCGCAGCCACCCTGCTCACCATAGCCTACAGACTGACGTATTAATTACTATAGGCCGGCCTTGAAGATGTTAAC TTGACTGAAGCTGGAATGAAGCTTTTCTCTACCCGATCAGGTGTCAAGGCCTACGTGCGCTGTTTGATGGCTGCC CTTTGGTTGTTCGCCCTGCTGATGATTCTTCCCAAAGGTTACCGGAGTTTCATGTACGAGAGGTGGCCTAACCTG GAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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