Protein ID | Ani_SJS100_1|g21.t1 |
Gene name | |
Location | scaffold_001:60520..61687 |
Strand | + |
Gene length (bp) | 1167 |
Transcript length (bp) | 1167 |
Coding sequence length (bp) | 1167 |
Protein length (aa) | 389 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04000 | Sas10_Utp3 | Sas10/Utp3/C1D family | 1.8E-18 | 20 | 113 |
Orthofinder run ID | 3 |
Orthogroup | 2364 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g21.t1 MAAAVSQSEPSGSQNISALLETLTTCLNSTGSSLPKTKRDAPSDVSIEPPQDGISLLDTKSDLLLSYMQNLVFLV IFQLRGLKSSADKDAETNDSLPDDIVKKLVELRVYLDRGVRPLEGRLKYQVDKVIKAAEDAERAERGAAAPKKSK KAKKSARDEESGSDEGSSDSEGDSEEDDEDEDEEEDIDEMAFRPNVSAFSKKVEPEAKQDKATARATSDGIYRPP RIMPTALPTTETRERRERPQRRSNVIDEFVSAEMSSAPMAEPSIGSTIVRGGRQTKSKKDREREAERTRYEETNF VRLAKESKKDRAKRLRAEGPRGTFGGEEWRGLTEGADRITKLTRRAQGSGSALDRSRKRKNEDGQRDDGMGVGQI FEKRRKKVDSWKR* |
Coding | >Ani_SJS100_1|g21.t1 ATGGCGGCAGCCGTATCCCAGTCAGAGCCTTCTGGCTCGCAGAACATCTCGGCTCTGCTCGAGACCCTCACCACG TGTCTCAACAGCACCGGATCATCGCTCCCCAAGACGAAGCGGGATGCGCCATCAGATGTGTCGATCGAACCGCCG CAAGATGGCATTTCGCTACTTGACACCAAGTCAGATCTCCTCCTTTCCTACATGCAGAACCTCGTATTCTTGGTC ATATTCCAGTTGAGGGGTCTCAAGTCATCCGCGGACAAGGACGCCGAAACGAACGACTCGCTTCCGGACGATATC GTAAAGAAACTCGTTGAACTACGTGTCTACTTGGATCGCGGTGTCCGGCCTTTGGAAGGACGGCTGAAATACCAG GTCGACAAGGTTATCAAGGCTGCAGAGGATGCGGAGCGGGCTGAGCGCGGGGCCGCAGCCCCCAAGAAGAGCAAG AAGGCTAAGAAGTCCGCTCGCGACGAGGAATCTGGCTCCGACGAAGGTAGCAGCGACAGCGAGGGAGACAGTGAG GAGGACGATGAGGATGAGGATGAGGAGGAGGATATAGATGAGATGGCATTCCGGCCTAACGTGTCTGCCTTTTCC AAGAAGGTCGAGCCTGAGGCCAAGCAGGATAAGGCGACCGCGAGAGCGACAAGCGACGGCATCTACCGACCACCT CGCATCATGCCCACAGCCCTACCGACTACCGAAACCCGGGAGCGCAGGGAGCGCCCGCAACGCAGGTCCAATGTC ATTGATGAATTCGTTAGCGCCGAGATGTCATCCGCACCTATGGCCGAGCCCAGTATCGGGAGTACGATCGTACGT GGTGGACGACAGACGAAGTCCAAGAAGGATCGCGAGCGTGAGGCTGAGCGGACGAGATATGAAGAAACCAACTTC GTGCGTCTGGCGAAGGAGAGCAAGAAGGATCGGGCCAAACGTCTGCGTGCTGAGGGTCCGCGAGGCACCTTTGGC GGGGAGGAATGGCGTGGTCTTACTGAGGGAGCAGACCGGATCACAAAGCTCACCCGGAGAGCCCAAGGAAGCGGC TCAGCGCTGGATCGGAGTCGGAAGCGCAAAAATGAAGACGGACAGCGCGATGATGGGATGGGAGTGGGACAGATT TTCGAGAAGCGTCGCAAGAAGGTGGACAGCTGGAAGCGGTGA |
Transcript | >Ani_SJS100_1|g21.t1 ATGGCGGCAGCCGTATCCCAGTCAGAGCCTTCTGGCTCGCAGAACATCTCGGCTCTGCTCGAGACCCTCACCACG TGTCTCAACAGCACCGGATCATCGCTCCCCAAGACGAAGCGGGATGCGCCATCAGATGTGTCGATCGAACCGCCG CAAGATGGCATTTCGCTACTTGACACCAAGTCAGATCTCCTCCTTTCCTACATGCAGAACCTCGTATTCTTGGTC ATATTCCAGTTGAGGGGTCTCAAGTCATCCGCGGACAAGGACGCCGAAACGAACGACTCGCTTCCGGACGATATC GTAAAGAAACTCGTTGAACTACGTGTCTACTTGGATCGCGGTGTCCGGCCTTTGGAAGGACGGCTGAAATACCAG GTCGACAAGGTTATCAAGGCTGCAGAGGATGCGGAGCGGGCTGAGCGCGGGGCCGCAGCCCCCAAGAAGAGCAAG AAGGCTAAGAAGTCCGCTCGCGACGAGGAATCTGGCTCCGACGAAGGTAGCAGCGACAGCGAGGGAGACAGTGAG GAGGACGATGAGGATGAGGATGAGGAGGAGGATATAGATGAGATGGCATTCCGGCCTAACGTGTCTGCCTTTTCC AAGAAGGTCGAGCCTGAGGCCAAGCAGGATAAGGCGACCGCGAGAGCGACAAGCGACGGCATCTACCGACCACCT CGCATCATGCCCACAGCCCTACCGACTACCGAAACCCGGGAGCGCAGGGAGCGCCCGCAACGCAGGTCCAATGTC ATTGATGAATTCGTTAGCGCCGAGATGTCATCCGCACCTATGGCCGAGCCCAGTATCGGGAGTACGATCGTACGT GGTGGACGACAGACGAAGTCCAAGAAGGATCGCGAGCGTGAGGCTGAGCGGACGAGATATGAAGAAACCAACTTC GTGCGTCTGGCGAAGGAGAGCAAGAAGGATCGGGCCAAACGTCTGCGTGCTGAGGGTCCGCGAGGCACCTTTGGC GGGGAGGAATGGCGTGGTCTTACTGAGGGAGCAGACCGGATCACAAAGCTCACCCGGAGAGCCCAAGGAAGCGGC TCAGCGCTGGATCGGAGTCGGAAGCGCAAAAATGAAGACGGACAGCGCGATGATGGGATGGGAGTGGGACAGATT TTCGAGAAGCGTCGCAAGAAGGTGGACAGCTGGAAGCGGTGA |
Gene | >Ani_SJS100_1|g21.t1 ATGGCGGCAGCCGTATCCCAGTCAGAGCCTTCTGGCTCGCAGAACATCTCGGCTCTGCTCGAGACCCTCACCACG TGTCTCAACAGCACCGGATCATCGCTCCCCAAGACGAAGCGGGATGCGCCATCAGATGTGTCGATCGAACCGCCG CAAGATGGCATTTCGCTACTTGACACCAAGTCAGATCTCCTCCTTTCCTACATGCAGAACCTCGTATTCTTGGTC ATATTCCAGTTGAGGGGTCTCAAGTCATCCGCGGACAAGGACGCCGAAACGAACGACTCGCTTCCGGACGATATC GTAAAGAAACTCGTTGAACTACGTGTCTACTTGGATCGCGGTGTCCGGCCTTTGGAAGGACGGCTGAAATACCAG GTCGACAAGGTTATCAAGGCTGCAGAGGATGCGGAGCGGGCTGAGCGCGGGGCCGCAGCCCCCAAGAAGAGCAAG AAGGCTAAGAAGTCCGCTCGCGACGAGGAATCTGGCTCCGACGAAGGTAGCAGCGACAGCGAGGGAGACAGTGAG GAGGACGATGAGGATGAGGATGAGGAGGAGGATATAGATGAGATGGCATTCCGGCCTAACGTGTCTGCCTTTTCC AAGAAGGTCGAGCCTGAGGCCAAGCAGGATAAGGCGACCGCGAGAGCGACAAGCGACGGCATCTACCGACCACCT CGCATCATGCCCACAGCCCTACCGACTACCGAAACCCGGGAGCGCAGGGAGCGCCCGCAACGCAGGTCCAATGTC ATTGATGAATTCGTTAGCGCCGAGATGTCATCCGCACCTATGGCCGAGCCCAGTATCGGGAGTACGATCGTACGT GGTGGACGACAGACGAAGTCCAAGAAGGATCGCGAGCGTGAGGCTGAGCGGACGAGATATGAAGAAACCAACTTC GTGCGTCTGGCGAAGGAGAGCAAGAAGGATCGGGCCAAACGTCTGCGTGCTGAGGGTCCGCGAGGCACCTTTGGC GGGGAGGAATGGCGTGGTCTTACTGAGGGAGCAGACCGGATCACAAAGCTCACCCGGAGAGCCCAAGGAAGCGGC TCAGCGCTGGATCGGAGTCGGAAGCGCAAAAATGAAGACGGACAGCGCGATGATGGGATGGGAGTGGGACAGATT TTCGAGAAGCGTCGCAAGAAGGTGGACAGCTGGAAGCGGTGA |