Protein ID | Ani_SJS100_1|g209.t1 |
Gene name | |
Location | scaffold_001:690068..691544 |
Strand | + |
Gene length (bp) | 1476 |
Transcript length (bp) | 1401 |
Coding sequence length (bp) | 1401 |
Protein length (aa) | 467 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00240 | ubiquitin | Ubiquitin family | 3.8E-22 | 16 | 86 |
PF00627 | UBA | UBA/TS-N domain | 1.2E-07 | 425 | 461 |
PF11976 | Rad60-SLD | Ubiquitin-2 like Rad60 SUMO-like | 2.5E-07 | 17 | 84 |
PF13881 | Rad60-SLD_2 | Ubiquitin-2 like Rad60 SUMO-like | 5.5E-05 | 27 | 97 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 2355 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g209.t1 MADDTAAAEDAHITFNVKSSNDAKYTLTLPSSTSVSDLKEKLASSEYADTPAERQRLIYSGRVLKDNETLATYNI KDGHTIHLVKSAPSNRPPSGAATTTSTSAPGGAAATPAAAGVPTNLAAGTGNNPLAGLTGARYAGFAQLPGAGMF GPDGGMGPPPDTETMLNMLENPQFQSTINEALQNPAMIDMMIQQNPMLREMGPGVRQMMQSPEFRRMLTDPNSIR QMVQMQRAMGGGGLGGGAFPAPGVTNTTPEENRDAQNNTGTTPTPGAAFNPFMPAGLGAGNPFAALFGGNPMMGN PAAGATPSGASPTAGGTQPDSTERAAGGDNATGQGQNQQGFQNPFSMFMNPALFGGQGGQAGANPFNPQQNPFLR DPALLQQWMQNLGAAPGEGGAAGTNPLAALFGGGFGSPPPQDNRPPEERYAEQLRQLNDMGFFEFERNIEALRRA GGSVQGAVEYLLSHPS* |
Coding | >Ani_SJS100_1|g209.t1 ATGGCTGATGATACCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATGATGCTAAATAT ACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTGAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACC CCAGCTGAGCGCCAGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAACGTACAACATC AAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCCAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACG TCAACATCCGCACCTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCGCTGCCGGCACG GGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATATGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTC GGGCCTGATGGCGGGATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAATTTCAG TCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACATGATGATCCAACAGAACCCCATGCTGCGCGAA ATGGGTCCTGGCGTACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCGATACGT CAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACC AACACAACACCCGAGGAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCGTTCAAC CCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAAC CCTGCTGCAGGAGCGACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAGCGAGCC GCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAAC CCAGCGCTCTTTGGCGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTCCTCCGG GACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGCACCAGGAGAAGGAGGCGCGGCTGGTACCAAT CCTCTGGCGGCACTGTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGAGGAACGGTAT GCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCGAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCA GGAGGCAGCGTGCAAGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAA |
Transcript | >Ani_SJS100_1|g209.t1 ATGGCTGATGATACCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATGATGCTAAATAT ACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTGAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACC CCAGCTGAGCGCCAGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAACGTACAACATC AAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCCAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACG TCAACATCCGCACCTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCGCTGCCGGCACG GGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATATGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTC GGGCCTGATGGCGGGATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAATTTCAG TCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACATGATGATCCAACAGAACCCCATGCTGCGCGAA ATGGGTCCTGGCGTACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCGATACGT CAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACC AACACAACACCCGAGGAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCGTTCAAC CCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAAC CCTGCTGCAGGAGCGACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAGCGAGCC GCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAAC CCAGCGCTCTTTGGCGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTCCTCCGG GACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGCACCAGGAGAAGGAGGCGCGGCTGGTACCAAT CCTCTGGCGGCACTGTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGAGGAACGGTAT GCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCGAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCA GGAGGCAGCGTGCAAGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAA |
Gene | >Ani_SJS100_1|g209.t1 ATGGCTGATGATACCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATGATGCTAAATAT ACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTGAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACC CCAGCTGAGCGCCAGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAACGTACAACATC AAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCCAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACG TCAACATCCGCACCTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCGCTGCCGGCACG GGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATATGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTC GGGCCTGATGGCGGGGTAAGTCGTTTGCCTTGATGTTGTCCTGACAGGCTTCTTGTGTCATCGACAAACCAACTA ATACGCTGTTTCTAGATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAATTTCAG TCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACATGATGATCCAACAGAACCCCATGCTGCGCGAA ATGGGTCCTGGCGTACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCGATACGT CAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACC AACACAACACCCGAGGAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCGTTCAAC CCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAAC CCTGCTGCAGGAGCGACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAGCGAGCC GCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAAC CCAGCGCTCTTTGGCGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTCCTCCGG GACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGCACCAGGAGAAGGAGGCGCGGCTGGTACCAAT CCTCTGGCGGCACTGTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGAGGAACGGTAT GCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCGAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCA GGAGGCAGCGTGCAAGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAA |