© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2054.t1 |
| Gene name | |
| Location | scaffold_008:212236..213382 |
| Strand | - |
| Gene length (bp) | 1146 |
| Transcript length (bp) | 1080 |
| Coding sequence length (bp) | 1080 |
| Protein length (aa) | 360 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00085 | Thioredoxin | Thioredoxin | 1.0E-29 | 21 | 125 |
| PF00085 | Thioredoxin | Thioredoxin | 1.5E-25 | 142 | 246 |
| PF07749 | ERp29 | Endoplasmic reticulum protein ERp29, C-terminal domain | 3.1E-22 | 264 | 348 |
| PF13098 | Thioredoxin_2 | Thioredoxin-like domain | 5.4E-08 | 35 | 115 |
| PF04756 | OST3_OST6 | OST3 / OST6 family, transporter family | 9.1E-07 | 49 | 133 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0043226 | organelle | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0005575 | cellular_component | No |
| GO:0043229 | intracellular organelle | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2054.t1 MVRLSNLVSCLGLASAVTAAVVDLVPKNFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTV GKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGGRDLESLSSFISEKTGVKPRGPKKEPSKVEMLNDATF KGAVGGDNDVLVAFTAPWCGHCKNLAPTWEALANDFVLEPNVVIAKVDADAENGKATAREQGVSGYPTIKFFPKG STESVPYEGARSEQAFIDFLNEKTGTHRTVGGGLDTKAGTIASLDELIASTSAADLAAAVKKAATELKDKYAQYY VKVADKLSQNAEYAAKELARLEKILAKGGSAPEKVDDLISRSNILRKFVGEEKEAKDEL* |
| Coding | >Ani_SJS100_1|g2054.t1 ATGGTCCGTCTCAGCAATCTCGTGAGCTGCCTCGGCCTGGCCTCCGCGGTCACCGCAGCAGTGGTCGATCTCGTC CCCAAGAACTTCGACGACGTCGTCCTCAAGTCCGGCAAGCCCGCTCTGGTTGAATTCTTCGCTCCCTGGTGCGGC CACTGCAAGAACCTCGCGCCCGTGTATGAAGAGCTGGGCCAGGCATTCGCCCATGCCTCCGACAAGGTCACCGTC GGCAAGGTTGATGCGGACGAGCACCGCGACTTGGGCCGCAAGTTCGGTGTCCAGGGATTCCCCACGCTAAAGTGG TTCGACGGAAAGAGTGACGAGCCGGAGGATTACAAGGGTGGTCGTGATTTGGAGAGTCTGTCTTCGTTCATCTCT GAGAAGACGGGCGTCAAGCCCCGTGGTCCTAAGAAGGAGCCCAGCAAGGTGGAGATGCTGAACGACGCGACTTTC AAGGGCGCTGTTGGTGGCGATAATGATGTTCTGGTTGCGTTCACCGCGCCGTGGTGTGGACACTGCAAGAACCTC GCTCCTACCTGGGAAGCCCTGGCCAACGACTTCGTCCTCGAGCCCAACGTTGTGATCGCCAAGGTCGACGCCGAC GCTGAGAACGGCAAGGCCACCGCCAGAGAGCAGGGCGTGTCCGGATACCCCACCATCAAGTTCTTCCCCAAGGGC TCTACGGAATCTGTTCCCTATGAGGGTGCCCGCTCTGAGCAGGCCTTCATTGACTTCCTCAACGAGAAGACCGGC ACCCACCGTACCGTTGGCGGCGGACTCGACACCAAGGCCGGCACCATTGCTAGCCTGGACGAGCTGATTGCCAGC ACTTCTGCTGCTGACCTGGCCGCCGCGGTCAAGAAGGCTGCTACGGAGCTTAAGGACAAGTACGCTCAGTACTAC GTCAAGGTTGCGGACAAGCTGAGCCAGAACGCCGAGTATGCCGCTAAGGAGCTTGCTCGTCTGGAGAAGATCCTG GCCAAGGGTGGATCGGCCCCTGAGAAGGTGGATGACCTTATCTCCCGCAGCAACATCCTTCGCAAGTTTGTTGGT GAGGAGAAGGAGGCCAAGGATGAGCTGTAG |
| Transcript | >Ani_SJS100_1|g2054.t1 ATGGTCCGTCTCAGCAATCTCGTGAGCTGCCTCGGCCTGGCCTCCGCGGTCACCGCAGCAGTGGTCGATCTCGTC CCCAAGAACTTCGACGACGTCGTCCTCAAGTCCGGCAAGCCCGCTCTGGTTGAATTCTTCGCTCCCTGGTGCGGC CACTGCAAGAACCTCGCGCCCGTGTATGAAGAGCTGGGCCAGGCATTCGCCCATGCCTCCGACAAGGTCACCGTC GGCAAGGTTGATGCGGACGAGCACCGCGACTTGGGCCGCAAGTTCGGTGTCCAGGGATTCCCCACGCTAAAGTGG TTCGACGGAAAGAGTGACGAGCCGGAGGATTACAAGGGTGGTCGTGATTTGGAGAGTCTGTCTTCGTTCATCTCT GAGAAGACGGGCGTCAAGCCCCGTGGTCCTAAGAAGGAGCCCAGCAAGGTGGAGATGCTGAACGACGCGACTTTC AAGGGCGCTGTTGGTGGCGATAATGATGTTCTGGTTGCGTTCACCGCGCCGTGGTGTGGACACTGCAAGAACCTC GCTCCTACCTGGGAAGCCCTGGCCAACGACTTCGTCCTCGAGCCCAACGTTGTGATCGCCAAGGTCGACGCCGAC GCTGAGAACGGCAAGGCCACCGCCAGAGAGCAGGGCGTGTCCGGATACCCCACCATCAAGTTCTTCCCCAAGGGC TCTACGGAATCTGTTCCCTATGAGGGTGCCCGCTCTGAGCAGGCCTTCATTGACTTCCTCAACGAGAAGACCGGC ACCCACCGTACCGTTGGCGGCGGACTCGACACCAAGGCCGGCACCATTGCTAGCCTGGACGAGCTGATTGCCAGC ACTTCTGCTGCTGACCTGGCCGCCGCGGTCAAGAAGGCTGCTACGGAGCTTAAGGACAAGTACGCTCAGTACTAC GTCAAGGTTGCGGACAAGCTGAGCCAGAACGCCGAGTATGCCGCTAAGGAGCTTGCTCGTCTGGAGAAGATCCTG GCCAAGGGTGGATCGGCCCCTGAGAAGGTGGATGACCTTATCTCCCGCAGCAACATCCTTCGCAAGTTTGTTGGT GAGGAGAAGGAGGCCAAGGATGAGCTGTAG |
| Gene | >Ani_SJS100_1|g2054.t1 ATGGTCCGTCTCAGCAATCTCGTGAGCTGCCTCGGCCTGGCCTCCGCGGTCACCGCAGCAGTGGTCGATCTCGTC CCCAAGAACTTCGACGACGTCGTCCTCAAGTCCGGCAAGCCCGCTCTGGTTGAATTCTTCGCTCCCTGGTGCGGC CACTGCAAGAACCTCGCGCCCGTGTATGAAGAGCTGGGCCAGGCATTCGCCCATGCCTCCGACAAGGTCACCGTC GGCAAGGTTGATGCGGACGAGCACCGCGACTTGGGCCGCAAGTTCGGTGTCCAGGGATTCCCCACGCTAAAGTGG TTCGACGGAAAGAGTGACGAGCCGGAGGATTACAAGGGTGGTCGTGATTTGGAGAGTCTGTCTTCGTTCATCTCT GAGAAGACGGGCGTCAAGCCCCGTGGTCCTAAGAAGGAGCCCAGCAAGGTGGAGATGCTGAACGACGCGACTTTC AAGGGCGCTGTTGGTGGCGATAATGATGTTCTGGTTGCGTTCACCGCGCCGTGGTGTGGACGTGAGTATCCTCGT TTCATCGTTCCCGCTCTAGAAGCAAATCACTAACTACGGCCTTTTAAAACAGACTGCAAGAACCTCGCTCCTACC TGGGAAGCCCTGGCCAACGACTTCGTCCTCGAGCCCAACGTTGTGATCGCCAAGGTCGACGCCGACGCTGAGAAC GGCAAGGCCACCGCCAGAGAGCAGGGCGTGTCCGGATACCCCACCATCAAGTTCTTCCCCAAGGGCTCTACGGAA TCTGTTCCCTATGAGGGTGCCCGCTCTGAGCAGGCCTTCATTGACTTCCTCAACGAGAAGACCGGCACCCACCGT ACCGTTGGCGGCGGACTCGACACCAAGGCCGGCACCATTGCTAGCCTGGACGAGCTGATTGCCAGCACTTCTGCT GCTGACCTGGCCGCCGCGGTCAAGAAGGCTGCTACGGAGCTTAAGGACAAGTACGCTCAGTACTACGTCAAGGTT GCGGACAAGCTGAGCCAGAACGCCGAGTATGCCGCTAAGGAGCTTGCTCGTCTGGAGAAGATCCTGGCCAAGGGT GGATCGGCCCCTGAGAAGGTGGATGACCTTATCTCCCGCAGCAACATCCTTCGCAAGTTTGTTGGTGAGGAGAAG GAGGCCAAGGATGAGCTGTAG |