Protein ID | Ani_SJS100_1|g205.t1 |
Gene name | |
Location | scaffold_001:677148..678743 |
Strand | + |
Gene length (bp) | 1595 |
Transcript length (bp) | 1536 |
Coding sequence length (bp) | 1536 |
Protein length (aa) | 512 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00339 | Arrestin_N | Arrestin (or S-antigen), N-terminal domain | 6.2E-07 | 39 | 190 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g205.t1 MATSSIITRGSSSLANFTVRSRPKVDIILANQTDGLVPSFTTGDTIKGTVTITVDHDTRFDDLEITFEGTSRTSV ERQSMPGRTGAYHTFLRLRQPIDETAYPTPRVLEPGRNYEFPFTFVVPERLLPHICNHAKTNLHVEQSHTLLPPT FGDPMIASNRKSVIDDMAPEMCRISYLVRVTLQRKPVAQNASPVTLVSVGKKVRVIPAVDEEPPLNVEDNDGLYS VRKEKDVKRGLMRGKLGRLVVAAAQPKPVQLSPSDTGNCDSVSTVATMQLRFDPVGNEQPPRLGTVWSKLRVSTF YSSDPWGDYPSATCIKSWAQMGRAMYTETVPLSTMCVASAQWTKHTDADLERRDSMHSTSSTESLPGPSASFAGN TYYTASVVVPITLPKAKSFVPTFYSCLIARAYALELSISYHAANSRILTPTTSLKVPLQLTCEAQPGVGSKGTVV DISQDEVNSQFFSPRSIAPPSVSELVPIAPPEYTSVQVSNLSPDRSRMLPPSVTNSGSVRV* |
Coding | >Ani_SJS100_1|g205.t1 ATGGCCACCTCATCTATCATCACGCGCGGCTCCAGCTCCCTGGCCAACTTTACGGTCCGCTCCCGCCCAAAAGTT GATATAATTCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATTCACCACCGGCGATACCATCAAAGGCACGGTT ACCATCACGGTCGATCATGACACTCGCTTTGATGACCTAGAGATCACATTTGAGGGTACATCGAGGACCTCGGTG GAGCGCCAATCGATGCCCGGCCGCACTGGAGCTTACCATACATTCCTCCGACTGCGACAGCCCATCGATGAGACC GCATATCCCACCCCCCGGGTTCTTGAACCCGGGCGCAACTATGAATTTCCCTTCACCTTTGTCGTGCCCGAGCGT CTACTGCCTCATATCTGTAACCACGCCAAAACAAATCTGCATGTCGAACAATCGCACACACTGCTGCCGCCCACG TTTGGTGATCCCATGATAGCCAGCAACCGCAAATCGGTCATCGACGACATGGCCCCCGAAATGTGCCGCATCTCC TATCTAGTTCGTGTGACCCTCCAGCGAAAGCCCGTGGCTCAGAACGCCTCGCCGGTTACGCTAGTGTCCGTTGGG AAAAAGGTGCGGGTCATTCCTGCGGTCGATGAGGAACCACCCCTTAACGTGGAGGACAATGATGGCTTGTACAGC GTCCGCAAAGAAAAAGATGTGAAACGTGGCTTGATGAGGGGGAAGCTGGGCCGATTGGTGGTGGCTGCTGCCCAG CCCAAGCCAGTGCAGTTGAGTCCATCCGACACCGGGAACTGCGATTCTGTGAGCACCGTTGCCACTATGCAGCTG CGCTTTGATCCGGTGGGCAACGAGCAGCCCCCTCGCCTAGGCACCGTATGGAGCAAACTCAGGGTGTCAACTTTT TACAGCTCCGATCCTTGGGGAGATTATCCGTCTGCTACATGTATCAAATCCTGGGCGCAGATGGGGCGGGCAATG TACACCGAAACTGTACCACTGTCCACCATGTGTGTTGCATCGGCACAATGGACAAAGCACACCGACGCCGATCTC GAACGCCGTGACTCCATGCACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCATCTGCCTCGTTCGCCGGAAAC ACCTACTATACCGCGTCGGTTGTTGTTCCAATCACCCTCCCCAAAGCCAAGTCATTCGTGCCGACGTTCTATTCC TGTTTGATCGCGCGCGCCTACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTAATTCCAGGATCCTGACTCCC ACCACATCCTTGAAGGTCCCACTGCAGCTGACTTGCGAGGCACAGCCAGGCGTCGGATCTAAGGGCACCGTGGTC GACATTTCCCAGGATGAAGTGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGCCCCCATCTGTCTCCGAGCTC GTCCCTATTGCACCACCCGAGTATACATCTGTCCAGGTCTCCAACCTGTCTCCTGACCGCTCGAGAATGTTACCA CCATCGGTGACCAATTCGGGCAGTGTTAGAGTTTAG |
Transcript | >Ani_SJS100_1|g205.t1 ATGGCCACCTCATCTATCATCACGCGCGGCTCCAGCTCCCTGGCCAACTTTACGGTCCGCTCCCGCCCAAAAGTT GATATAATTCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATTCACCACCGGCGATACCATCAAAGGCACGGTT ACCATCACGGTCGATCATGACACTCGCTTTGATGACCTAGAGATCACATTTGAGGGTACATCGAGGACCTCGGTG GAGCGCCAATCGATGCCCGGCCGCACTGGAGCTTACCATACATTCCTCCGACTGCGACAGCCCATCGATGAGACC GCATATCCCACCCCCCGGGTTCTTGAACCCGGGCGCAACTATGAATTTCCCTTCACCTTTGTCGTGCCCGAGCGT CTACTGCCTCATATCTGTAACCACGCCAAAACAAATCTGCATGTCGAACAATCGCACACACTGCTGCCGCCCACG TTTGGTGATCCCATGATAGCCAGCAACCGCAAATCGGTCATCGACGACATGGCCCCCGAAATGTGCCGCATCTCC TATCTAGTTCGTGTGACCCTCCAGCGAAAGCCCGTGGCTCAGAACGCCTCGCCGGTTACGCTAGTGTCCGTTGGG AAAAAGGTGCGGGTCATTCCTGCGGTCGATGAGGAACCACCCCTTAACGTGGAGGACAATGATGGCTTGTACAGC GTCCGCAAAGAAAAAGATGTGAAACGTGGCTTGATGAGGGGGAAGCTGGGCCGATTGGTGGTGGCTGCTGCCCAG CCCAAGCCAGTGCAGTTGAGTCCATCCGACACCGGGAACTGCGATTCTGTGAGCACCGTTGCCACTATGCAGCTG CGCTTTGATCCGGTGGGCAACGAGCAGCCCCCTCGCCTAGGCACCGTATGGAGCAAACTCAGGGTGTCAACTTTT TACAGCTCCGATCCTTGGGGAGATTATCCGTCTGCTACATGTATCAAATCCTGGGCGCAGATGGGGCGGGCAATG TACACCGAAACTGTACCACTGTCCACCATGTGTGTTGCATCGGCACAATGGACAAAGCACACCGACGCCGATCTC GAACGCCGTGACTCCATGCACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCATCTGCCTCGTTCGCCGGAAAC ACCTACTATACCGCGTCGGTTGTTGTTCCAATCACCCTCCCCAAAGCCAAGTCATTCGTGCCGACGTTCTATTCC TGTTTGATCGCGCGCGCCTACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTAATTCCAGGATCCTGACTCCC ACCACATCCTTGAAGGTCCCACTGCAGCTGACTTGCGAGGCACAGCCAGGCGTCGGATCTAAGGGCACCGTGGTC GACATTTCCCAGGATGAAGTGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGCCCCCATCTGTCTCCGAGCTC GTCCCTATTGCACCACCCGAGTATACATCTGTCCAGGTCTCCAACCTGTCTCCTGACCGCTCGAGAATGTTACCA CCATCGGTGACCAATTCGGGCAGTGTTAGAGTTTAG |
Gene | >Ani_SJS100_1|g205.t1 ATGGCCACCTCATCTATCATCACGCGCGGCTCCAGCTCCCTGGCCAACTTTACGGTCCGCTCCCGCCCAAAAGTT GATATAATTCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATTCACCACCGGCGATACCATCAAAGGCACGGTT ACCATCACGGTCGATCATGACACTCGCTTTGATGACCTAGAGATCACATTTGAGGGTATGTTGGCTCAAACCATG TCAGGAAATTACCAGGAATAGTCTTACTGACTGGGTCAGGTACATCGAGGACCTCGGTGGAGCGCCAATCGATGC CCGGCCGCACTGGAGCTTACCATACATTCCTCCGACTGCGACAGCCCATCGATGAGACCGCATATCCCACCCCCC GGGTTCTTGAACCCGGGCGCAACTATGAATTTCCCTTCACCTTTGTCGTGCCCGAGCGTCTACTGCCTCATATCT GTAACCACGCCAAAACAAATCTGCATGTCGAACAATCGCACACACTGCTGCCGCCCACGTTTGGTGATCCCATGA TAGCCAGCAACCGCAAATCGGTCATCGACGACATGGCCCCCGAAATGTGCCGCATCTCCTATCTAGTTCGTGTGA CCCTCCAGCGAAAGCCCGTGGCTCAGAACGCCTCGCCGGTTACGCTAGTGTCCGTTGGGAAAAAGGTGCGGGTCA TTCCTGCGGTCGATGAGGAACCACCCCTTAACGTGGAGGACAATGATGGCTTGTACAGCGTCCGCAAAGAAAAAG ATGTGAAACGTGGCTTGATGAGGGGGAAGCTGGGCCGATTGGTGGTGGCTGCTGCCCAGCCCAAGCCAGTGCAGT TGAGTCCATCCGACACCGGGAACTGCGATTCTGTGAGCACCGTTGCCACTATGCAGCTGCGCTTTGATCCGGTGG GCAACGAGCAGCCCCCTCGCCTAGGCACCGTATGGAGCAAACTCAGGGTGTCAACTTTTTACAGCTCCGATCCTT GGGGAGATTATCCGTCTGCTACATGTATCAAATCCTGGGCGCAGATGGGGCGGGCAATGTACACCGAAACTGTAC CACTGTCCACCATGTGTGTTGCATCGGCACAATGGACAAAGCACACCGACGCCGATCTCGAACGCCGTGACTCCA TGCACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCATCTGCCTCGTTCGCCGGAAACACCTACTATACCGCGT CGGTTGTTGTTCCAATCACCCTCCCCAAAGCCAAGTCATTCGTGCCGACGTTCTATTCCTGTTTGATCGCGCGCG CCTACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTAATTCCAGGATCCTGACTCCCACCACATCCTTGAAGG TCCCACTGCAGCTGACTTGCGAGGCACAGCCAGGCGTCGGATCTAAGGGCACCGTGGTCGACATTTCCCAGGATG AAGTGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGCCCCCATCTGTCTCCGAGCTCGTCCCTATTGCACCAC CCGAGTATACATCTGTCCAGGTCTCCAACCTGTCTCCTGACCGCTCGAGAATGTTACCACCATCGGTGACCAATT CGGGCAGTGTTAGAGTTTAG |