© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2044.t1 |
| Gene name | |
| Location | scaffold_008:175237..176914 |
| Strand | + |
| Gene length (bp) | 1677 |
| Transcript length (bp) | 1305 |
| Coding sequence length (bp) | 1305 |
| Protein length (aa) | 435 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00892 | EamA | EamA-like transporter family | 9.4E-08 | 158 | 221 |
| PF13127 | DUF3955 | Protein of unknown function (DUF3955) | 1.4E-06 | 19 | 68 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 53 | 75 | 22 |
| 3 | 154 | 176 | 22 |
| 4 | 180 | 199 | 19 |
| 5 | 206 | 223 | 17 |
| 6 | 253 | 275 | 22 |
| 7 | 288 | 310 | 22 |
| 8 | 325 | 347 | 22 |
| 9 | 352 | 374 | 22 |
| 10 | 378 | 395 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2044.t1 MEAPETTEGSVLVGAARRTLGICLLLVVVFLWTASNFLASTIFADDTYSKPFFVTYINTSIFILPLFTILFRRLV KLWRAGKLYRIRSFKSLLEHLDSHDTNVEARGILSHDASGEHWRSEDEDPETWAAARFDAASRGQQSKLGLKATA KLSFEFCLLWFSANYFAMACLQYTTVGSTTILTSTSGVWTLIFGALIGVERFTIRKLIGVIASLIGIILISRVDM STPDNPSNNNNSSSGSGSTFPSKTPGEIALGDAMAAFSAILYGVYTIVLKKQVGDESRVNMQLFFGLVGLFNTVL LWPGFIILHVLGIETVGMPDTGRVWTIILVNALASLASDIAWAYAMLLTTPLVVTVGLSLTIPLSLVGQIVLQGQ YASALYWAGATVVFLSFLVVNQESREVDGEGPVVVGRGGAGSGYEAIPGDRGNAYGRDR* |
| Coding | >Ani_SJS100_1|g2044.t1 ATGGAAGCACCCGAGACCACAGAAGGCTCGGTTTTAGTCGGCGCCGCAAGACGAACATTGGGAATTTGCCTGTTG CTCGTCGTGGTATTTTTATGGACGGCCTCGAATTTCCTCGCCAGTACGATATTCGCCGACGATACATACTCGAAG CCGTTTTTCGTGACGTACATCAACACCTCGATATTCATCCTTCCCCTCTTCACGATTCTCTTCCGTCGGCTCGTG AAATTATGGCGCGCAGGGAAACTCTACCGAATTCGCTCATTCAAAAGCCTATTGGAGCATCTTGATTCTCACGAT ACGAACGTCGAGGCACGGGGAATACTTAGTCACGATGCAAGTGGGGAGCATTGGCGCAGCGAAGACGAAGACCCT GAAACATGGGCTGCTGCTAGGTTCGATGCCGCATCCAGAGGCCAACAATCTAAGCTGGGATTAAAGGCGACAGCT AAATTGAGCTTCGAGTTCTGTCTGTTATGGTTCTCCGCAAACTACTTTGCAATGGCCTGTCTCCAATACACAACG GTAGGAAGCACCACAATCCTAACCTCAACAAGCGGAGTCTGGACCCTCATCTTCGGCGCCCTAATCGGGGTCGAG CGCTTTACCATCCGAAAGCTCATTGGAGTCATTGCCTCTTTAATCGGCATAATCCTCATCTCCCGCGTCGACATG TCAACCCCCGACAACCCCAGCAACAACAACAACAGTAGCAGCGGAAGCGGAAGTACCTTCCCCTCCAAAACCCCA GGCGAGATCGCCCTCGGCGACGCAATGGCCGCATTCAGCGCCATCCTATACGGTGTTTACACCATCGTGCTGAAA AAGCAAGTGGGGGACGAATCCCGCGTCAACATGCAACTATTCTTCGGATTAGTAGGACTATTCAACACGGTCCTC CTCTGGCCGGGCTTCATCATTCTTCACGTTCTCGGTATAGAAACTGTAGGAATGCCTGATACGGGAAGAGTCTGG ACGATTATCTTGGTAAACGCCCTCGCCTCCCTCGCCTCCGACATCGCCTGGGCGTACGCAATGCTTCTCACCACG CCACTAGTGGTAACAGTGGGACTAAGCTTGACGATCCCGCTCTCGCTGGTAGGCCAGATCGTGCTTCAGGGACAG TACGCGAGCGCGTTGTACTGGGCTGGGGCTACGGTGGTGTTCTTGTCGTTTTTGGTGGTCAATCAGGAGAGTCGG GAAGTGGATGGGGAGGGGCCTGTGGTGGTTGGGAGAGGAGGGGCTGGTAGTGGGTATGAGGCTATTCCGGGGGAT CGTGGTAATGCTTATGGAAGGGATAGATGA |
| Transcript | >Ani_SJS100_1|g2044.t1 ATGGAAGCACCCGAGACCACAGAAGGCTCGGTTTTAGTCGGCGCCGCAAGACGAACATTGGGAATTTGCCTGTTG CTCGTCGTGGTATTTTTATGGACGGCCTCGAATTTCCTCGCCAGTACGATATTCGCCGACGATACATACTCGAAG CCGTTTTTCGTGACGTACATCAACACCTCGATATTCATCCTTCCCCTCTTCACGATTCTCTTCCGTCGGCTCGTG AAATTATGGCGCGCAGGGAAACTCTACCGAATTCGCTCATTCAAAAGCCTATTGGAGCATCTTGATTCTCACGAT ACGAACGTCGAGGCACGGGGAATACTTAGTCACGATGCAAGTGGGGAGCATTGGCGCAGCGAAGACGAAGACCCT GAAACATGGGCTGCTGCTAGGTTCGATGCCGCATCCAGAGGCCAACAATCTAAGCTGGGATTAAAGGCGACAGCT AAATTGAGCTTCGAGTTCTGTCTGTTATGGTTCTCCGCAAACTACTTTGCAATGGCCTGTCTCCAATACACAACG GTAGGAAGCACCACAATCCTAACCTCAACAAGCGGAGTCTGGACCCTCATCTTCGGCGCCCTAATCGGGGTCGAG CGCTTTACCATCCGAAAGCTCATTGGAGTCATTGCCTCTTTAATCGGCATAATCCTCATCTCCCGCGTCGACATG TCAACCCCCGACAACCCCAGCAACAACAACAACAGTAGCAGCGGAAGCGGAAGTACCTTCCCCTCCAAAACCCCA GGCGAGATCGCCCTCGGCGACGCAATGGCCGCATTCAGCGCCATCCTATACGGTGTTTACACCATCGTGCTGAAA AAGCAAGTGGGGGACGAATCCCGCGTCAACATGCAACTATTCTTCGGATTAGTAGGACTATTCAACACGGTCCTC CTCTGGCCGGGCTTCATCATTCTTCACGTTCTCGGTATAGAAACTGTAGGAATGCCTGATACGGGAAGAGTCTGG ACGATTATCTTGGTAAACGCCCTCGCCTCCCTCGCCTCCGACATCGCCTGGGCGTACGCAATGCTTCTCACCACG CCACTAGTGGTAACAGTGGGACTAAGCTTGACGATCCCGCTCTCGCTGGTAGGCCAGATCGTGCTTCAGGGACAG TACGCGAGCGCGTTGTACTGGGCTGGGGCTACGGTGGTGTTCTTGTCGTTTTTGGTGGTCAATCAGGAGAGTCGG GAAGTGGATGGGGAGGGGCCTGTGGTGGTTGGGAGAGGAGGGGCTGGTAGTGGGTATGAGGCTATTCCGGGGGAT CGTGGTAATGCTTATGGAAGGGATAGATGA |
| Gene | >Ani_SJS100_1|g2044.t1 ATGGAAGCACCCGAGACCACAGAAGGCTCGGTTTTAGTCGGCGCCGCAAGACGAACATTGGGAATTTGCCTGTTG CTCGTCGTGGTATTTTTATGGACGGCCTCGAATTTCCTCGCCAGTGTATGTGCTTTGCTTCTCTCGACTCTTCAC TCTATAATACATCCGGCACGGTGCTAATCTATTCTCTTTCTATGTACCACAGACGATATTCGCCGACGATACATA CTCGAAGCCGTTTTTCGTGACGTACATCAACACCTCGATATTCATCCTTCCCCTCTTCACGATTCTCTTCCGTCG GCTCGTGAAATTATGGCGCGCAGGGAAACTCTACCGAATTCGCTCATTCAAAAGCCTATTGGAGCATCTTGATTC TCACGATACGAACGTCGAGGCACGGGGAATACTTAGTCACGATGCAAGTGGGGAGCATTGGCGCAGCGAAGACGA AGACCCTGAAACATGGGCTGCTGCTAGGTTCGATGCCGCATCCAGAGGCCAACAATCTAAGCTGGGATTAAAGGC GACAGCTAAATTGAGCTTCGAGTTCTGTCTGTTATGGGTAAGCATACGTCAACACTGAGTATCCATTTCGTATAA AATCTCAGAAAGCTAACGAGCACCAGTTCTCCGTAAGTACCAGCGATAAATAAAGCTATCCCTCCTTCTGCGGGG ACCGGAAACTGAACCAACTAGGCAAACTACTTTGCAATGGCCTGTCTCCAATACACAACGGTAGGAAGCACCACA ATCCTAACCTCAACAAGCGGTACGTTCGCCACCATCCCACCCTGCATCACCATTTCACCACCCAACACTAACCCC CAAATCCAGGAGTCTGGACCCTCATCTTCGGCGCCCTAATCGGGGTCGAGCGCTTTACCATCCGAAAGCTCATTG GAGTCATTGCCTCTTTAATCGGCATAATCCTCATCTCCCGCGTCGACATGTCAACCCCCGACAACCCCAGCAACA ACAACAACAGTAGCAGCGGAAGCGGAAGTACCTTCCCCTCCAAAACCCCAGGCGAGATCGCCCTCGGCGACGCAA TGGCCGCATTCAGCGCCATCCTATACGGTGTTTACACCATCGTGCTGAAAAAGCAAGTGGGGGACGAATCCCGCG TCAACATGCAACTATTCTTCGGATTAGTAGGACTATTCAACACGGTCCTCCTCTGGCCGGGCTTCATCATTCTTC ACGTTCTCGGTATAGAAACTGTAGGAATGCCTGATACGGGAAGAGTCTGGACGATTATCTTGGTACGTTTTCTCC AACCGCCAACCCCTCCACACTAAACCCTTTCTCACACCAACTATACAATACCCTACCCAATAACTAATACCAACG CTAATGCAGGTAAACGCCCTCGCCTCCCTCGCCTCCGACATCGCCTGGGCGTACGCAATGCTTCTCACCACGCCA CTAGTGGTAACAGTGGGACTAAGCTTGACGATCCCGCTCTCGCTGGTAGGCCAGATCGTGCTTCAGGGACAGTAC GCGAGCGCGTTGTACTGGGCTGGGGCTACGGTGGTGTTCTTGTCGTTTTTGGTGGTCAATCAGGAGAGTCGGGAA GTGGATGGGGAGGGGCCTGTGGTGGTTGGGAGAGGAGGGGCTGGTAGTGGGTATGAGGCTATTCCGGGGGATCGT GGTAATGCTTATGGAAGGGATAGATGA |