© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2041.t1 |
| Gene name | |
| Location | scaffold_008:168959..171559 |
| Strand | + |
| Gene length (bp) | 2600 |
| Transcript length (bp) | 2406 |
| Coding sequence length (bp) | 2406 |
| Protein length (aa) | 802 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07780 | Spb1_C | Spb1 C-terminal domain | 4.0E-87 | 586 | 797 |
| PF01728 | FtsJ | FtsJ-like methyltransferase | 6.1E-57 | 24 | 200 |
| PF11861 | DUF3381 | Domain of unknown function (DUF3381) | 6.6E-53 | 234 | 392 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0006364 | rRNA processing | Yes |
| GO:0032259 | methylation | Yes |
| GO:0005634 | nucleus | Yes |
| GO:0016072 | rRNA metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0034470 | ncRNA processing | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006396 | RNA processing | No |
| GO:0043226 | organelle | No |
| GO:0009987 | cellular process | No |
| GO:0034660 | ncRNA metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0043229 | intracellular organelle | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2041.t1 MAIQKKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPAQSIIVGV DLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLAE GGTFVTKVFRSKDYNPLLWVFKQLFASVEATKPPSSRNVSAEIFVVCRNYKAPKRIDPKFLDPKHVFAELADPTP NNEAKVFNPEKKKRKREGYEEGDYTQFKEIPVTEFINTTDPIAILGSYNKLSFQQSPSGDLALATLERLEDTTDE IKACCEDLKVLGKKEFRNLLRWRLKVREKFGLAVKKGAQTKEDETEEVAEVAPMDDELAIQEELMRLREKETSKQ KKERRKENERKRKEIVRLQMHMTTPMDIGKEQLGPNGEDATFSLKRAERGGVRDTIAAGHEASIESDSEDSASES ETEESDDEEDRLERELDNLYEQYQDRKEDRDTKLRAKKARKDFEADSWDGFSDSDKEEGEDSDDEGLGVSSAVDK APKSASLSNSASLFFDQDIFQGLEDIDDVEDEDEEVEDEDSAIEVKEDRPKGKESEKKKAKESKKPVQAMEDSDE EDLEELEDPRKKNGQLDIDIITAEAMALAQQMATGEKKSHDVVDDGFNRFAFRDSDGLPEWFLDDENKHSVQNRP ITKAAAAAIKEKMRAINARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAIARLMSRATKKK PKQQVKLVVAKGNNRGISGRPRGVKGKYKIVDSRMKKDIRAQKRLAKKKKN* |
| Coding | >Ani_SJS100_1|g2041.t1 ATGGCGATTCAGAAGAAGCATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGGGATACAGA GCGAGAGCTGCTTTCAAGCTGATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGAAGAGCAAAGTCGTTCTCGAT CTTTGCGCGGCACCCGGTTCGTGGTGTCAAGTTGCTGCAGAATGCATGCCCGCACAGAGTATCATCGTCGGTGTC GATCTTGCGCCTATTAAGCCGATTCCCCGAGTCATTACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCACA ACAATCAGACAGCACCTGAAGCACTGGAAGGCTGATACCGTTCTTCACGATGGTGCCCCCAATGTCGGTACCGCA TGGGTTCAGGATGCTTTCTCTCAGGCAGAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAA GGCGGTACATTCGTTACGAAGGTCTTCAGATCCAAGGACTACAATCCGCTTTTGTGGGTTTTCAAGCAACTTTTT GCATCCGTGGAGGCAACGAAACCCCCGTCTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATTAC AAGGCACCAAAGCGCATTGATCCGAAGTTCCTCGATCCTAAGCACGTCTTCGCAGAACTTGCGGACCCTACCCCC AACAATGAGGCTAAGGTGTTCAACCCGGAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATACG CAATTCAAGGAGATCCCAGTTACCGAGTTCATCAACACCACTGATCCGATTGCCATCCTGGGTTCATACAACAAA CTCAGTTTTCAACAGTCACCAAGTGGCGACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATACGACCGACGAG ATCAAAGCCTGCTGTGAGGATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAAACCTGCTCAGGTGGCGACTGAAA GTGCGGGAGAAGTTTGGTCTCGCTGTGAAGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGGAG GTCGCTCCCATGGATGATGAGCTGGCCATTCAAGAGGAGTTGATGCGCCTTCGTGAGAAGGAAACCTCAAAGCAA AAGAAAGAGCGCCGCAAGGAGAACGAGAGGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACATGACGACCCCC ATGGATATCGGAAAGGAGCAACTGGGACCTAATGGCGAGGATGCTACATTCTCGCTCAAGCGCGCCGAGAGAGGC GGAGTTAGGGACACCATTGCCGCCGGCCATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGTCT GAGACCGAGGAGAGCGATGACGAGGAAGACCGTCTGGAGCGGGAACTTGACAACCTGTACGAGCAATACCAGGAC CGCAAGGAAGACCGGGACACGAAGTTACGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACGGC TTTTCCGATTCTGACAAGGAAGAAGGTGAAGACTCCGATGATGAGGGTCTTGGAGTTAGCTCTGCCGTCGACAAA GCTCCCAAGTCAGCTTCCCTTTCCAACAGTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAGAC ATTGACGATGTGGAGGACGAAGATGAGGAAGTGGAGGATGAAGATAGCGCCATCGAAGTTAAGGAGGATCGGCCT AAGGGCAAGGAGTCTGAAAAGAAAAAGGCAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACGAA GAAGATCTTGAAGAGCTTGAGGATCCACGGAAAAAGAATGGACAGCTCGATATCGATATCATCACTGCGGAAGCC ATGGCACTCGCTCAGCAGATGGCCACTGGAGAGAAGAAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATTT GCTTTCCGTGATAGTGATGGTCTCCCCGAGTGGTTCCTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCT ATCACCAAGGCGGCCGCAGCCGCAATCAAGGAGAAGATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTATG GAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCCCAGCGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCA GATGACGAAGCTCTCAGCGAGCGTGATAAGTCGCAGGCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAAG CCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAGGGAAACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAG GGCAAGTACAAGATTGTGGATTCTCGTATGAAGAAGGATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAAG AATTAG |
| Transcript | >Ani_SJS100_1|g2041.t1 ATGGCGATTCAGAAGAAGCATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGGGATACAGA GCGAGAGCTGCTTTCAAGCTGATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGAAGAGCAAAGTCGTTCTCGAT CTTTGCGCGGCACCCGGTTCGTGGTGTCAAGTTGCTGCAGAATGCATGCCCGCACAGAGTATCATCGTCGGTGTC GATCTTGCGCCTATTAAGCCGATTCCCCGAGTCATTACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCACA ACAATCAGACAGCACCTGAAGCACTGGAAGGCTGATACCGTTCTTCACGATGGTGCCCCCAATGTCGGTACCGCA TGGGTTCAGGATGCTTTCTCTCAGGCAGAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAA GGCGGTACATTCGTTACGAAGGTCTTCAGATCCAAGGACTACAATCCGCTTTTGTGGGTTTTCAAGCAACTTTTT GCATCCGTGGAGGCAACGAAACCCCCGTCTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATTAC AAGGCACCAAAGCGCATTGATCCGAAGTTCCTCGATCCTAAGCACGTCTTCGCAGAACTTGCGGACCCTACCCCC AACAATGAGGCTAAGGTGTTCAACCCGGAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATACG CAATTCAAGGAGATCCCAGTTACCGAGTTCATCAACACCACTGATCCGATTGCCATCCTGGGTTCATACAACAAA CTCAGTTTTCAACAGTCACCAAGTGGCGACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATACGACCGACGAG ATCAAAGCCTGCTGTGAGGATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAAACCTGCTCAGGTGGCGACTGAAA GTGCGGGAGAAGTTTGGTCTCGCTGTGAAGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGGAG GTCGCTCCCATGGATGATGAGCTGGCCATTCAAGAGGAGTTGATGCGCCTTCGTGAGAAGGAAACCTCAAAGCAA AAGAAAGAGCGCCGCAAGGAGAACGAGAGGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACATGACGACCCCC ATGGATATCGGAAAGGAGCAACTGGGACCTAATGGCGAGGATGCTACATTCTCGCTCAAGCGCGCCGAGAGAGGC GGAGTTAGGGACACCATTGCCGCCGGCCATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGTCT GAGACCGAGGAGAGCGATGACGAGGAAGACCGTCTGGAGCGGGAACTTGACAACCTGTACGAGCAATACCAGGAC CGCAAGGAAGACCGGGACACGAAGTTACGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACGGC TTTTCCGATTCTGACAAGGAAGAAGGTGAAGACTCCGATGATGAGGGTCTTGGAGTTAGCTCTGCCGTCGACAAA GCTCCCAAGTCAGCTTCCCTTTCCAACAGTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAGAC ATTGACGATGTGGAGGACGAAGATGAGGAAGTGGAGGATGAAGATAGCGCCATCGAAGTTAAGGAGGATCGGCCT AAGGGCAAGGAGTCTGAAAAGAAAAAGGCAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACGAA GAAGATCTTGAAGAGCTTGAGGATCCACGGAAAAAGAATGGACAGCTCGATATCGATATCATCACTGCGGAAGCC ATGGCACTCGCTCAGCAGATGGCCACTGGAGAGAAGAAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATTT GCTTTCCGTGATAGTGATGGTCTCCCCGAGTGGTTCCTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCT ATCACCAAGGCGGCCGCAGCCGCAATCAAGGAGAAGATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTATG GAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCCCAGCGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCA GATGACGAAGCTCTCAGCGAGCGTGATAAGTCGCAGGCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAAG CCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAGGGAAACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAG GGCAAGTACAAGATTGTGGATTCTCGTATGAAGAAGGATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAAG AATTAG |
| Gene | >Ani_SJS100_1|g2041.t1 ATGGCGATTCAGAAGAAGGTAATGCGGCATTGGTCTGGCTCGCGGCAATAGAAAACCCAGTACTGACAATGACTT AGCATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGGGATACAGAGCGAGAGCTGCTTTCA AGCTGATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGAAGAGCAAAGTCGTTCTCGATCTTTGCGCGGCACCCG GTGTGAGTACAACCCCTCAGTTTGATTTCTAACGCCTGGTCTGGTGGCTGACCATTCTCGCAACACAGTCGTGGT GTCAAGTTGCTGCAGAATGCATGCCCGCACAGAGTATCATCGTCGGTGTCGATCTTGCGCCTATTAAGCCGATTC CCCGAGTCATTACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCACAACAATCAGACAGCACCTGAAGCACT GGAAGGCTGATACCGTTCTTCACGATGGTGCCCCCAATGTCGGTACCGCATGGGTTCAGGATGCTTTCTCTCAGG CAGAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAAGGCGGTACATTCGTTACGAAGGTCT TCAGATCCAAGGACTACAATCCGCTTTTGTGGGTTTTCAAGCAACTTTTTGCATCCGTGGAGGCAACGAAACCCC CGTCTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATTACAAGGCACCAAAGCGCATTGATCCGA AGTTCCTCGATCCTAAGCACGTCTTCGCAGAACTTGCGGACCCTACCCCCAACAATGAGGCTAAGGTGTTCAACC CGGAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATACGCAATTCAAGGAGATCCCAGTTACCG AGTTCATCAACACCACTGATCCGATTGCCATCCTGGGTTCATACAACAAACTCAGTTTTCAACAGTCACCAAGTG GCGACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATACGACCGACGAGATCAAAGCCTGCTGTGAGGATCTCA AGGTTCTGGGTAAGAAGGAGTTCCGAAACCTGCTCAGGTGGCGACTGAAAGTGCGGGAGAAGTTTGGTCTCGCTG TGAAGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGGAGGTCGCTCCCATGGATGATGAGCTGG CCATTCAAGAGGAGTTGATGCGCCTTCGTGAGAAGGAAACCTCAAAGCAAAAGAAAGAGCGCCGCAAGGAGAACG AGAGGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACATGACGACCCCCATGGATATCGGAAAGGAGCAACTGG GACCTAATGGCGAGGATGCTACATTCTCGCTCAAGCGCGCCGAGAGAGGCGGAGTTAGGGACACCATTGCCGCCG GCCATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGTCTGAGACCGAGGAGAGCGATGACGAGG AAGACCGTCTGGAGCGGGAACTTGACAACCTGTACGAGCAATACCAGGACCGCAAGGAAGACCGGGACACGAAGT TACGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACGGCTTTTCCGATTCTGACAAGGAAGAAG GTGAAGACTCCGATGATGAGGGTCTTGGAGTTAGCTCTGCCGTCGACAAAGCTCCCAAGTCAGCTTCCCTTTCCA ACAGTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAGACATTGACGATGTGGAGGACGAAGATG AGGAAGTGGAGGATGAAGATAGCGCCATCGAAGTTAAGGAGGATCGGCCTAAGGGCAAGGAGTCTGAAAAGAAAA AGGCAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACGAAGAAGATCTTGAAGAGCTTGAGGATC CACGGAAAAAGAATGGACAGCTCGGTAAGTTCGCAGAATGCGGCATATCATTGCATTGTACCCTGGATAACTAAT GCTGACTCTACTATGTAGATATCGATATCATCACTGCGGAAGCCATGGCACTCGCTCAGCAGATGGCCACTGGAG AGAAGAAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATTTGCTTTCCGTGATAGTGATGGTCTCCCCGAGT GGTTCCTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCTATCACCAAGGCGGCCGCAGCCGCAATCAAGG AGAAGATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTATGGAAGCCAAGGGCCGCAAGAAGATGAAGGCCG CCCAGCGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCAGATGACGAAGCTCTCAGCGAGCGTGATAAGT CGCAGGCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAAGCCCAAGCAGCAGGTGAAGTTGGTGGTTGCCA AGGGAAACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAGGGCAAGTACAAGATTGTGGATTCTCGTATGA AGAAGGATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAAGAATTAG |