Protein ID | Ani_SJS100_1|g2038.t1 |
Gene name | |
Location | scaffold_008:158351..159830 |
Strand | + |
Gene length (bp) | 1479 |
Transcript length (bp) | 1479 |
Coding sequence length (bp) | 1479 |
Protein length (aa) | 493 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12763 | EF-hand_4 | Cytoskeletal-regulatory complex EF hand | 6.1E-05 | 411 | 474 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 2306 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g2038.t1 MDPPRNIQTPELPESGSVKDKIGKFSAYQQQPSGLKDAFGKTPTSIGANRSRTPQQIAAQLAAGRSTPGEITATH TGVSRTQGSRPTTSKRSDDNEGPPLLAPKPVWATSANTASVNKLLRSEADLPIRDKSIQRRPVAQISPIEAARLA AKKPRPPPVPRKPAAVATGPTSVPINVHSKGPESPEPTSKNHSSRHLEDTTIPFKAPPALPPRTGASSVPRKDLT NHRRLLDTNHGSRRRPSTPGTASLYTTSLSNSTTSLLDSSSGLDEGALSDAVVASSRASVRASQERKVPPPPPPE RRARSRSLKQFPHTAKGEHTDSSSPSTHLRQTLREPTKIAENDEGYQRHKHLIRKHPHKHHEGDRRRWRSEITEK ERKRYEGVWAANKGLLLPPAHLRVPEAYPPESSEMVVNLVAADIWSRSRLPRHVLAQVWDLVDGQHIGLLTREEF VVGMWLIDQQLKGHKLPPRVPASVWGSAKRISGVHIHGLPPA* |
Coding | >Ani_SJS100_1|g2038.t1 ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTCAGTCAAAGACAAGATCGGGAAGTTT AGTGCCTATCAGCAGCAGCCCTCTGGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGACGCCAGGTGAAATCACTGCCACGCAC ACGGGCGTCAGCAGGACGCAAGGTTCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAACAAGCTCCTTCGCAGCGAGGCCGAT TTGCCAATTAGAGACAAGTCAATTCAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGCCACTGGTCCAACCTCAGTTCCTATC AACGTACATTCCAAAGGCCCAGAGAGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTCGTCCGTGCCTCGGAAAGACCTGACA AATCATCGGCGGCTTTTAGACACCAACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGGACTGGATGAAGGGGCCTTATCGGAT GCGGTCGTGGCCTCGTCAAGGGCATCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGGAGAACACACAGATTCATCTAGTCCA TCCACACATTTACGACAGACCCTCCGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAGATGGCGGAGTGAGATTACGGAGAAA GAGCGAAAGCGGTACGAGGGTGTCTGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGCTGACATCTGGTCACGTAGTCGCCTG CCGCGACATGTTCTAGCACAAGTATGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCCACCCAGGGTGCCCGCCAGTGTGTGG GGAAGCGCCAAGCGGATATCAGGAGTGCATATTCATGGGCTTCCTCCTGCCTGA |
Transcript | >Ani_SJS100_1|g2038.t1 ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTCAGTCAAAGACAAGATCGGGAAGTTT AGTGCCTATCAGCAGCAGCCCTCTGGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGACGCCAGGTGAAATCACTGCCACGCAC ACGGGCGTCAGCAGGACGCAAGGTTCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAACAAGCTCCTTCGCAGCGAGGCCGAT TTGCCAATTAGAGACAAGTCAATTCAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGCCACTGGTCCAACCTCAGTTCCTATC AACGTACATTCCAAAGGCCCAGAGAGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTCGTCCGTGCCTCGGAAAGACCTGACA AATCATCGGCGGCTTTTAGACACCAACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGGACTGGATGAAGGGGCCTTATCGGAT GCGGTCGTGGCCTCGTCAAGGGCATCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGGAGAACACACAGATTCATCTAGTCCA TCCACACATTTACGACAGACCCTCCGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAGATGGCGGAGTGAGATTACGGAGAAA GAGCGAAAGCGGTACGAGGGTGTCTGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGCTGACATCTGGTCACGTAGTCGCCTG CCGCGACATGTTCTAGCACAAGTATGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCCACCCAGGGTGCCCGCCAGTGTGTGG GGAAGCGCCAAGCGGATATCAGGAGTGCATATTCATGGGCTTCCTCCTGCCTGA |
Gene | >Ani_SJS100_1|g2038.t1 ATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCTCAGTCAAAGACAAGATCGGGAAGTTT AGTGCCTATCAGCAGCAGCCCTCTGGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAGG TCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGACGCCAGGTGAAATCACTGCCACGCAC ACGGGCGTCAGCAGGACGCAAGGTTCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTTG CTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGAACAAGCTCCTTCGCAGCGAGGCCGAT TTGCCAATTAGAGACAAGTCAATTCAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGCT GCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTGCCACTGGTCCAACCTCAGTTCCTATC AACGTACATTCCAAAGGCCCAGAGAGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATACT ACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTTCGTCCGTGCCTCGGAAAGACCTGACA AATCATCGGCGGCTTTTAGACACCAACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTAT ACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCGGACTGGATGAAGGGGCCTTATCGGAT GCGGTCGTGGCCTCGTCAAGGGCATCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGAG CGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGGGAGAACACACAGATTCATCTAGTCCA TCCACACATTTACGACAGACCCTCCGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAAG CATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAAGATGGCGGAGTGAGATTACGGAGAAA GAGCGAAAGCGGTACGAGGGTGTCTGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCCC GAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCGCTGACATCTGGTCACGTAGTCGCCTG CCGCGACATGTTCTAGCACAAGTATGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATTT GTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCCCACCCAGGGTGCCCGCCAGTGTGTGG GGAAGCGCCAAGCGGATATCAGGAGTGCATATTCATGGGCTTCCTCCTGCCTGA |