© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2030.t1 |
| Gene name | |
| Location | scaffold_008:131697..133040 |
| Strand | - |
| Gene length (bp) | 1343 |
| Transcript length (bp) | 1185 |
| Coding sequence length (bp) | 1185 |
| Protein length (aa) | 395 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05208 | ALG3 | ALG3 protein | 4.2E-140 | 4 | 358 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000030 | mannosyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 26 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 22 | 17 |
| 2 | 77 | 99 | 22 |
| 3 | 121 | 143 | 22 |
| 4 | 150 | 172 | 22 |
| 5 | 182 | 204 | 22 |
| 6 | 242 | 264 | 22 |
| 7 | 291 | 313 | 22 |
| 8 | 325 | 344 | 19 |
| 9 | 359 | 381 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2030.t1 MAPLLVLGDAFLCALIIWKVPYTEIDWATYMQQISLYLSGERDYTLIRGSTGPLVYPAAHVYSYTALYHLTDEGR DIFFGQILFAVLYLITLVVVLCCYRQSGAPPYLLPLLVLSKRLHSVYVLRLFNDGLAALAMWVAILLFMNRKWTA AVAVWSTGVAIKMTLLLLAPAIAVVTVLSLSLGPSVGLGVLAVLVQVLLAIPFLQNNPAGYLSRAFELTRQFMFK WTVNWRFVGEEVFLSKSFSLALLAVHIVLLGAFAVTGWLRYSRSSLPAFIRNLLAGRHRTVSLPKPYIMSVMLSS LTVGLLCARSLHYQFFAYLSWATPFLLWRAGFHPILLYLIWAMQEWAWNTFPSTNLSSIIVVLSLATQSFGVLAN SASAFYTMRSNPSGKEHNQ* |
| Coding | >Ani_SJS100_1|g2030.t1 ATGGCTCCGCTCCTGGTCCTGGGTGACGCTTTCCTCTGCGCGCTGATCATCTGGAAAGTGCCCTATACCGAGATT GACTGGGCCACGTACATGCAACAAATATCGCTTTATTTGTCAGGAGAACGCGATTATACTCTCATCAGAGGATCA ACCGGTCCCCTTGTCTACCCGGCCGCCCATGTATACAGTTATACGGCCCTCTACCATCTCACCGATGAGGGGCGC GATATTTTCTTCGGTCAGATACTATTTGCTGTGCTCTACTTGATCACGCTGGTGGTTGTGCTGTGCTGTTATAGA CAGTCGGGTGCTCCGCCGTACTTGCTTCCGCTGCTGGTCCTTTCCAAGAGACTTCACAGCGTTTATGTCCTGCGT CTGTTCAATGATGGCTTGGCGGCGCTGGCGATGTGGGTTGCCATTCTGTTATTCATGAATCGGAAGTGGACGGCT GCGGTCGCAGTGTGGTCTACTGGTGTTGCGATTAAGATGACACTGTTGCTGCTGGCCCCGGCTATTGCTGTGGTC ACGGTGCTTAGTCTGTCGCTTGGTCCTAGCGTGGGGCTGGGGGTTCTGGCGGTGCTTGTCCAGGTTTTACTCGCG ATACCGTTCCTACAAAACAACCCGGCGGGGTATCTCTCGCGGGCGTTCGAGCTAACCAGACAGTTCATGTTTAAA TGGACAGTCAATTGGAGATTTGTTGGCGAAGAAGTATTCTTATCTAAGAGCTTTTCCCTGGCATTGCTGGCCGTC CACATTGTGCTGCTAGGCGCTTTTGCCGTCACTGGTTGGCTGAGATACTCCAGGTCTAGCTTGCCTGCGTTCATT CGGAATCTGCTAGCGGGTCGACATCGCACAGTGTCCCTCCCCAAACCCTACATCATGAGCGTGATGCTCTCGTCT CTGACAGTTGGCTTGTTGTGCGCAAGGTCCCTTCATTACCAATTCTTCGCCTACCTCTCCTGGGCGACACCCTTC CTCCTCTGGCGCGCAGGGTTTCATCCAATCTTGCTGTACCTTATCTGGGCTATGCAAGAGTGGGCTTGGAACACA TTCCCCAGCACCAACCTCAGTTCCATCATTGTTGTCCTCTCACTTGCTACCCAGAGTTTCGGCGTCCTTGCGAAT AGTGCCAGCGCCTTTTATACCATGCGTTCGAACCCTAGCGGTAAAGAGCATAACCAATAG |
| Transcript | >Ani_SJS100_1|g2030.t1 ATGGCTCCGCTCCTGGTCCTGGGTGACGCTTTCCTCTGCGCGCTGATCATCTGGAAAGTGCCCTATACCGAGATT GACTGGGCCACGTACATGCAACAAATATCGCTTTATTTGTCAGGAGAACGCGATTATACTCTCATCAGAGGATCA ACCGGTCCCCTTGTCTACCCGGCCGCCCATGTATACAGTTATACGGCCCTCTACCATCTCACCGATGAGGGGCGC GATATTTTCTTCGGTCAGATACTATTTGCTGTGCTCTACTTGATCACGCTGGTGGTTGTGCTGTGCTGTTATAGA CAGTCGGGTGCTCCGCCGTACTTGCTTCCGCTGCTGGTCCTTTCCAAGAGACTTCACAGCGTTTATGTCCTGCGT CTGTTCAATGATGGCTTGGCGGCGCTGGCGATGTGGGTTGCCATTCTGTTATTCATGAATCGGAAGTGGACGGCT GCGGTCGCAGTGTGGTCTACTGGTGTTGCGATTAAGATGACACTGTTGCTGCTGGCCCCGGCTATTGCTGTGGTC ACGGTGCTTAGTCTGTCGCTTGGTCCTAGCGTGGGGCTGGGGGTTCTGGCGGTGCTTGTCCAGGTTTTACTCGCG ATACCGTTCCTACAAAACAACCCGGCGGGGTATCTCTCGCGGGCGTTCGAGCTAACCAGACAGTTCATGTTTAAA TGGACAGTCAATTGGAGATTTGTTGGCGAAGAAGTATTCTTATCTAAGAGCTTTTCCCTGGCATTGCTGGCCGTC CACATTGTGCTGCTAGGCGCTTTTGCCGTCACTGGTTGGCTGAGATACTCCAGGTCTAGCTTGCCTGCGTTCATT CGGAATCTGCTAGCGGGTCGACATCGCACAGTGTCCCTCCCCAAACCCTACATCATGAGCGTGATGCTCTCGTCT CTGACAGTTGGCTTGTTGTGCGCAAGGTCCCTTCATTACCAATTCTTCGCCTACCTCTCCTGGGCGACACCCTTC CTCCTCTGGCGCGCAGGGTTTCATCCAATCTTGCTGTACCTTATCTGGGCTATGCAAGAGTGGGCTTGGAACACA TTCCCCAGCACCAACCTCAGTTCCATCATTGTTGTCCTCTCACTTGCTACCCAGAGTTTCGGCGTCCTTGCGAAT AGTGCCAGCGCCTTTTATACCATGCGTTCGAACCCTAGCGGTAAAGAGCATAACCAATAG |
| Gene | >Ani_SJS100_1|g2030.t1 ATGGCTCCGCTCCTGGTCCTGGGTGACGCTTTCCTCTGCGCGCTGATCATCTGGAAAGTGCCCTGTAAGGCTACA GCTAAGCTCCGTTCACACCCTTTTGCGACAAGTGAAGCAATGCCACTAACCTAGCCCCGTTGCTATTGTCCACAG ATACCGAGATTGACTGGGCCACGTACATGCAACAAATATCGCTTTATTTGTCAGGAGAACGCGATTATACTCTCA TCAGAGGATCAACCGGTCCCCTTGTCTACCCGGCCGCCCATGTATACAGTTATACGGCCCTCTACCATCTCACCG ATGAGGGGCGCGATATTTTCTTCGGTCAGATACTATTTGCTGTGCTCTACTTGATCACGCTGGTGGTTGTGCTGT GCTGTTATAGACAGTCGGGTGCTCCGCCGTACTTGCTTCCGCTGCTGGTCCTTTCCAAGAGACTTCACAGCGTTT ATGTCCTGCGTCTGTTCAATGATGGCTTGGCGGCGCTGGCGATGTGGGTTGCCATTCTGTTATTCATGAATCGGA AGTGGACGGCTGCGGTCGCAGTGTGGTCTACTGGTGTTGCGATTAAGATGACACTGTTGCTGCTGGCCCCGGCTA TTGCTGTGGTCACGGTGCTTAGTCTGTCGCTTGGTCCTAGCGTGGGGCTGGGGGTTCTGGCGGTGCTTGTCCAGG TAGGTTCCCATGAGGCTGTAGGGTTGGCCAAAGGCAATTTGTGTGAAGACTTGTCTGACATTGAACTACAGGTTT TACTCGCGATACCGTTCCTACAAAACAACCCGGCGGGGTATCTCTCGCGGGCGTTCGAGCTAACCAGACAGTTCA TGTTTAAATGGACAGTCAATTGGAGATTTGTTGGCGAAGAAGTATTCTTATCTAAGAGCTTTTCCCTGGCATTGC TGGCCGTCCACATTGTGCTGCTAGGCGCTTTTGCCGTCACTGGTTGGCTGAGATACTCCAGGTCTAGCTTGCCTG CGTTCATTCGGAATCTGCTAGCGGGTCGACATCGCACAGTGTCCCTCCCCAAACCCTACATCATGAGCGTGATGC TCTCGTCTCTGACAGTTGGCTTGTTGTGCGCAAGGTCCCTTCATTACCAATTCTTCGCCTACCTCTCCTGGGCGA CACCCTTCCTCCTCTGGCGCGCAGGGTTTCATCCAATCTTGCTGTACCTTATCTGGGCTATGCAAGAGTGGGCTT GGAACACATTCCCCAGCACCAACCTCAGTTCCATCATTGTTGTCCTCTCACTTGCTACCCAGAGTTTCGGCGTCC TTGCGAATAGTGCCAGCGCCTTTTATACCATGCGTTCGAACCCTAGCGGTAAAGAGCATAACCAATAG |