© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g2023.t1 |
| Gene name | |
| Location | scaffold_008:107598..108800 |
| Strand | + |
| Gene length (bp) | 1202 |
| Transcript length (bp) | 795 |
| Coding sequence length (bp) | 795 |
| Protein length (aa) | 265 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01813 | ATP-synt_D | ATP synthase subunit D | 1.7E-70 | 17 | 209 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | Yes |
| GO:0003674 | molecular_function | No |
| GO:0022853 | active ion transmembrane transporter activity | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015399 | primary active transmembrane transporter activity | No |
| GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | No |
| GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | No |
| GO:0015078 | proton transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0019829 | ATPase-coupled cation transmembrane transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0042625 | ATPase-coupled ion transmembrane transporter activity | No |
| GO:0022804 | active transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g2023.t1 MSGAVGREAVFPTRQSLGLMKGKLKGAETGHSLLKRKSEALTKRFREITRRIDEAKQKMGRVMQIAAFSLAEVSY AVGGDIGYQIQESAKQARFRVRAKQENVSGVLLPHFESYTEDGINDFGLTGLGKGGMQVQRCRETYARAVETLVE LASLQTAFVILDEVIKVVNRRVNAIEHVIIPRTENTIKYINSELDELDREEFYRLKKVSGKKQRDNAAADAEILA ARQKEAARLQESAAAEKKEEEAPEAPDVLGEQEDADVIF* |
| Coding | >Ani_SJS100_1|g2023.t1 ATGTCGGGTGCTGTGGGCCGTGAGGCAGTCTTTCCGACTCGCCAGTCGTTGGGGTTGATGAAGGGTAAACTGAAG GGTGCCGAGACTGGACACAGTTTGTTGAAGCGGAAGAGTGAGGCTTTGACCAAGCGTTTCCGGGAGATCACCCGG CGCATCGACGAGGCCAAGCAGAAGATGGGACGGGTCATGCAAATCGCCGCTTTCTCGCTTGCCGAAGTCAGCTAT GCGGTCGGAGGAGATATTGGCTACCAAATCCAGGAGTCCGCCAAGCAGGCCCGGTTCCGCGTGAGGGCCAAGCAA GAGAACGTCTCGGGTGTTTTGCTCCCTCATTTCGAGAGCTACACGGAGGATGGAATCAACGACTTTGGTTTGACA GGTCTCGGAAAGGGTGGTATGCAGGTCCAGCGCTGTCGGGAGACCTATGCTAGAGCAGTGGAAACACTGGTGGAG CTTGCGAGTCTACAGACTGCATTCGTGATTTTAGATGAGGTCATTAAGGTGGTGAACCGGAGAGTCAACGCCATT GAGCACGTTATCATCCCCCGTACTGAAAACACCATCAAATACATCAACTCGGAGCTGGACGAGCTCGACAGAGAA GAGTTTTACCGCCTCAAGAAGGTCTCCGGTAAGAAGCAACGCGACAACGCTGCTGCAGACGCAGAGATCCTGGCT GCGCGGCAGAAAGAAGCAGCCAGGCTGCAGGAGAGCGCCGCTGCTGAGAAGAAGGAAGAAGAGGCGCCTGAAGCG CCCGACGTCCTCGGAGAGCAAGAAGATGCGGACGTGATTTTCTAG |
| Transcript | >Ani_SJS100_1|g2023.t1 ATGTCGGGTGCTGTGGGCCGTGAGGCAGTCTTTCCGACTCGCCAGTCGTTGGGGTTGATGAAGGGTAAACTGAAG GGTGCCGAGACTGGACACAGTTTGTTGAAGCGGAAGAGTGAGGCTTTGACCAAGCGTTTCCGGGAGATCACCCGG CGCATCGACGAGGCCAAGCAGAAGATGGGACGGGTCATGCAAATCGCCGCTTTCTCGCTTGCCGAAGTCAGCTAT GCGGTCGGAGGAGATATTGGCTACCAAATCCAGGAGTCCGCCAAGCAGGCCCGGTTCCGCGTGAGGGCCAAGCAA GAGAACGTCTCGGGTGTTTTGCTCCCTCATTTCGAGAGCTACACGGAGGATGGAATCAACGACTTTGGTTTGACA GGTCTCGGAAAGGGTGGTATGCAGGTCCAGCGCTGTCGGGAGACCTATGCTAGAGCAGTGGAAACACTGGTGGAG CTTGCGAGTCTACAGACTGCATTCGTGATTTTAGATGAGGTCATTAAGGTGGTGAACCGGAGAGTCAACGCCATT GAGCACGTTATCATCCCCCGTACTGAAAACACCATCAAATACATCAACTCGGAGCTGGACGAGCTCGACAGAGAA GAGTTTTACCGCCTCAAGAAGGTCTCCGGTAAGAAGCAACGCGACAACGCTGCTGCAGACGCAGAGATCCTGGCT GCGCGGCAGAAAGAAGCAGCCAGGCTGCAGGAGAGCGCCGCTGCTGAGAAGAAGGAAGAAGAGGCGCCTGAAGCG CCCGACGTCCTCGGAGAGCAAGAAGATGCGGACGTGATTTTCTAG |
| Gene | >Ani_SJS100_1|g2023.t1 ATGTCGGGTGCTGTGGTATGTCTGGATTTGATCCTCCTGTCTCCTTTCAAGAGCTATGCGGGGACATGCATACTG ACTACACTTACCTATTCAGGGCCGTGAGGCAGTCTTTCCGACTCGCCAGTCGTTGGGGTTGATGAAGGGTAAACT GAAGGGTGCCGAGACTGGACACAGTTTGTTGAAGCGGAAGAGTGAGGCTTTGACCAAGTACGTTCTTTGACTTGC GCTATTCTAATTGGAGACTGTCATCACTAACCCAACCTGATCTACAGGCGTTTCCGGGGTATGAGAGGCCTTCCT CCCTAAAGCTTCCCACCATGTCAGAGACTAATATATGTGTTTAGAGATCACCCGGCGCATCGACGAGGCCAAGCA GAAGATGGGACGGGTCATGCAAATCGCCGCTTTCTCGCTTGCCGAAGTCAGCTATGCGGTCGGAGGAGATATTGG CTACCAAATCCAGGAGTCCGCCAAGCAGGCCCGGTTCCGCGTGAGGGCCAAGCAAGAGAACGTCTCGGGTGTTTT GCTCCCTCATTTCGAGAGCTACACGGAGGATGGAATCAACGACTTTGGTTTGACAGGTCTCGGAAAGGGTGGTAT GCAGGTCCAGCGCTGTCGGGAGACCTATGCTAGAGCAGTGGAAACACTGGTGGAGCTTGCGAGTCTACAGGTTGG TTTTATACACCCATGGTGTTGTTCAGATGAGTTAACACTGTTCCTAGACTGCATTCGTGATTTTAGATGAGGTCA TTAAGGTGGTGAACCGGAGAGGTACGTGCTGCTGTCAGAACTTGTTCCGTCCATTAAGCTAACTTGTCACAGTCA ACGCCATGTAAGATATTCATCGCTTCGCCCGAGTAATTCAGATACTAACCCGTTACAGTGAGCACGTTATCATCC CCCGTACTGAAAACACCATCAAATGTTCGTATCCCCTACCCTGCCACCTCCCTCCCAACTAACACAGCCTAGACA TCAACTCGGAGCTGGACGAGCTCGACAGAGAAGAGTTTTACCGCCTCAAGAAGGTCTCCGGTAAGAAGCAACGCG ACAACGCTGCTGCAGACGCAGAGATCCTGGCTGCGCGGCAGAAAGAAGCAGCCAGGCTGCAGGAGAGCGCCGCTG CTGAGAAGAAGGAAGAAGAGGCGCCTGAAGCGCCCGACGTCCTCGGAGAGCAAGAAGATGCGGACGTGATTTTCT AG |